LOCUS BC036112 2491 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens suppressor of var1, 3-like 1 (S. cerevisiae), mRNA
(cDNA clone MGC:33941 IMAGE:5297587), complete cds.
ACCESSION BC036112
VERSION BC036112.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2491)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2491)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: m Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543666.
FEATURES Location/Qualifiers
source 1..2491
/db_xref="H-InvDB:HIT000051633"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33941 IMAGE:5297587"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2491
/gene="SUPV3L1"
/gene_synonym="SUV3"
/db_xref="GeneID:6832"
/db_xref="HGNC:HGNC:11471"
/db_xref="MIM:605122"
CDS 56..2416
/gene="SUPV3L1"
/gene_synonym="SUV3"
/codon_start=1
/product="suppressor of var1, 3-like 1 (S. cerevisiae)"
/protein_id="AAH36112.1"
/db_xref="GeneID:6832"
/db_xref="HGNC:HGNC:11471"
/db_xref="MIM:605122"
/translation="MSFSRALLWARLPAGRQAGHRAAICSALRPHFGPFPGVLGQVSV
LATASSSASGGSKIPNTSLFVPLTVKPQGPSADGDVGAELTRPLDKNEVKKVLDKFYK
RKEIQKLGADYGLDARLFHQAFISFRNYIMQSHSLDVDIHIVLNDICFGAAHADDLFP
FFLRHAKQIFPVLDCKDDLRKISDLRIPPNWYPDARAMQRKIIFHSGPTNSGKTYHAI
QKYFSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTGEERVTVQPNGKQASHVSCTV
EMCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGEPAAIDLVMELMY
TTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLES
AVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINE
KGERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAA
GLHPTAEQIEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPL
SLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKD
LMDLEAVHDVLDLYLWLSYRFMDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSET
HKLLNLEGFPSGSQSRLSGTLKSQARRTRGTKALGSKATEPPSPDAGELSLASRLVQQ
GLLTPDMLKQLEKEWMTQQTEHNKEKTESGTHPKGTRRKKKEPDSD"
BASE COUNT 693 a 547 c 582 g 669 t
ORIGIN
1 actgtccgcc gccgtgtccg cggctgcgcc agacagtgta gaacctgcgg cctcgatgtc
61 cttctcccgt gccctattgt gggctcggct cccggcgggg cgccaggctg gccaccgggc
121 agccatctgc tctgcccttc gtccccactt tgggcccttt cccggggttc tggggcaagt
181 ttctgtcctt gccaccgcct cctcctctgc ctccggtggc tccaaaatac caaacacgtc
241 cttgttcgtg cccctgactg tgaaacctca gggccccagc gccgacggcg acgtcggggc
301 cgagctaacc cggcctctgg acaagaatga agtaaagaag gtcttagaca aattttacaa
361 gaggaaagaa attcagaaac tgggtgctga ttatggactt gatgctcgtc tcttccacca
421 agctttcata agctttagaa attatattat gcagtctcat tccctggatg tggacattca
481 cattgttttg aatgatattt gcttcggtgc agctcatgcg gatgatttat tcccattttt
541 cttgagacat gccaaacaaa tatttcctgt gttggactgt aaggatgatc tacgtaaaat
601 cagtgactta agaataccac ctaactggta cccagatgct agagccatgc agcggaagat
661 aatatttcat tcaggcccca caaacagtgg aaagacttat cacgcaatcc agaaatactt
721 ctcagcaaag tctggagtgt attgtggccc tctaaaatta ctggcacatg agatcttcga
781 aaagagtaat gctgctggtg tgccatgtga cttggtgaca ggtgaagagc gtgtgacagt
841 tcagccaaat gggaaacagg cttcacatgt ttcttgtaca gttgagatgt gcagtgttac
901 aactccttat gaagtggctg taattgatga aattcaaatg attagagatc cagccagagg
961 atgggcctgg accagagcac ttctaggact gtgtgctgaa gaggttcatt tgtgtggaga
1021 acctgctgct attgacctgg tgatggagct tatgtacaca acgggggagg aagtggaggt
1081 tcgagactat aagaggctta cccccatttc tgtgctggac catgcactag aatctttaga
1141 taaccttcgg cctggggact gcattgtctg ttttagcaag aatgatattt attctgtgag
1201 tcggcagatt gaaattcggg gattagaatc agctgttata tatggcagtc tcccacctgg
1261 gaccaaactt gctcaagcaa aaaagtttaa tgatcccaat gacccatgca aaatcttggt
1321 tgctacagat gcaattggca tgggacttaa tttgagcata aggagaatta ttttttactc
1381 ccttataaag cccagtatca atgaaaaggg agagagagaa ctagaaccaa tcacaacctc
1441 tcaagccctg cagattgctg gcagagctgg cagattcagc tcacggttta aagaaggaga
1501 ggttacaaca atgaatcatg aagatctcag tttattaaag gaaattttga agaggcctgt
1561 ggatcctata agggcagctg gtcttcatcc aactgctgag cagattgaaa tgtttgccta
1621 ccatctccct gatgcaacac tgtccaatct cattgatatt tttgtagact tttcacaagt
1681 tgatgggcag tattttgtct gcaatatgga tgattttaaa ttttctgcag agttgatcca
1741 gcatattcca ctaagtctgc gagtgaggta tgttttctgc acagctccta tcaacaagaa
1801 gcagcctttt gtgtgttctt cactgttaca gtttgccagg cagtatagca ggaatgagcc
1861 cctgaccttt gcatggttac gccgatacat caaatggcct ttacttccac ctaagaatat
1921 taaagacctc atggatcttg aagctgtcca cgatgtcttg gatctttact tgtggctaag
1981 ctaccgattt atggatatgt ttccagatgc cagccttatt cgagatctcc agaaagaact
2041 agatggtatt atccaagatg gtgtgcacaa tatcactaaa ttgattaaaa tgtctgagac
2101 gcataagctg ttgaatttgg agggctttcc atcagggagc cagtcacgat tgtcaggaac
2161 cttaaagagc caagctagaa ggacacgcgg caccaaagct ctagggagta aagctactga
2221 gccacccagc cccgatgcag gagagctgtc ccttgcttcc agattggtgc agcaaggact
2281 cctcactcca gacatgctga aacagctaga aaaagagtgg atgacacaac aaactgaaca
2341 caacaaagaa aaaacagagt ctgggactca tccaaaaggg acgagaagaa agaagaagga
2401 acctgattcg gactagtttt ctgttcctgt tttttttttt ttatttaatt ttgcaaataa
2461 aaatttattt tgaagaaaaa aaaaaaaaaa a
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