LOCUS BC036103 3870 bp mRNA linear HUM 07-AUG-2008 DEFINITION Homo sapiens dystrophin, mRNA (cDNA clone IMAGE:5274415), complete cds. ACCESSION BC036103 VERSION BC036103.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3870) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3870) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 48 Row: f Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5032280 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..3870 /db_xref="H-InvDB:HIT000094257" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5274415" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3870 /gene="DMD" /gene_synonym="BMD" /gene_synonym="CMD3B" /gene_synonym="DXS142" /gene_synonym="DXS164" /gene_synonym="DXS206" /gene_synonym="DXS230" /gene_synonym="DXS239" /gene_synonym="DXS268" /gene_synonym="DXS269" /gene_synonym="DXS270" /gene_synonym="DXS272" /db_xref="GeneID:1756" /db_xref="HGNC:HGNC:2928" /db_xref="MIM:300377" CDS 177..2495 /gene="DMD" /gene_synonym="BMD" /gene_synonym="CMD3B" /gene_synonym="DXS142" /gene_synonym="DXS164" /gene_synonym="DXS206" /gene_synonym="DXS230" /gene_synonym="DXS239" /gene_synonym="DXS268" /gene_synonym="DXS269" /gene_synonym="DXS270" /gene_synonym="DXS272" /codon_start=1 /product="DMD protein" /protein_id="AAH36103.1" /db_xref="GeneID:1756" /db_xref="HGNC:HGNC:2928" /db_xref="MIM:300377" /translation="MEDEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLD LLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGL IWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLA LNALIHSHRPDLFDWNSVVCQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKK SILMYITSLFQVLPQQVSIEAIQEVEMLPRPPKVTKEEHFQLHHQMHYSQQITVSLAQ GYERTSSPKPRFKSYAYTQAAYVTTSDPTRSPFPSQHLEAPEDKSFGSSLMESEVNLD RYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNIL QLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQNQKLK ELNDWLTKTEERTRKMEEEPLGPDLEDLKRQVQQHKVLQEDLEQEQVRVNSLTHMVVV VDESSGDHATAALEEQLKVLGDRWANICRWTEDRWVLLQDILLKWQRLTEEQCLFSAW LSEKEDAVNKIHTTGFKDQNEMLSSLQKLAVLKADLEKKKQSMGKLYSLKQDLLSTLK NKSVTQKTEAWLDNFARCWDNLVQKLEKSTAQISQAVTTTQPSLTQTTVMETVTTVTT REQILVKHAQEELPPPPPQKKRQITVDSEIRKRLDVDITELHSWITRSEAVLQSPEFA IFRKEGNFSDLKEKVNVGYALIFISVLILCCL" BASE COUNT 1321 a 677 c 763 g 1109 t ORIGIN 1 atgggaaagg ggagctgttg gaattcaaat agactttctg gttcccagca gtcggcagta 61 atagaatgct ttcaggaaga tgacagaatc aggagaaaga tgctgttttg cactatcttg 121 atttgttaca gcagccaact tattggcatg atggagtgac aggaaaaaca gctggcatgg 181 aagatgaaag agaagatgtt caaaagaaaa cattcacaaa atgggtaaat gcacaatttt 241 ctaagtttgg gaagcagcat attgagaacc tcttcagtga cctacaggat gggaggcgcc 301 tcctagacct cctcgaaggc ctgacagggc aaaaactgcc aaaagaaaaa ggatccacaa 361 gagttcatgc cctgaacaat gtcaacaagg cactgcgggt tttgcagaac aataatgttg 421 atttagtgaa tattggaagt actgacatcg tagatggaaa tcataaactg actcttggtt 481 tgatttggaa tataatcctc cactggcagg tcaaaaatgt aatgaaaaat atcatggctg 541 gattgcaaca aaccaacagt gaaaagattc tcctgagctg ggtccgacaa tcaactcgta 601 attatccaca ggttaatgta atcaacttca ccaccagctg gtctgatggc ctggctttga 661 atgctctcat ccatagtcat aggccagacc tatttgactg gaatagtgtg gtttgccagc 721 agtcagccac acaacgactg gaacatgcat tcaacatcgc cagatatcaa ttaggcatag 781 agaaactact cgatcctgaa gatgttgata ccacctatcc agataagaag tccatcttaa 841 tgtacatcac atcactcttc caagttttgc ctcaacaagt gagcattgaa gccatccagg 901 aagtggaaat gttgccaagg ccacctaaag tgactaaaga agaacatttt cagttacatc 961 atcaaatgca ctattctcaa cagatcacgg tcagtctagc acagggatat gagagaactt 1021 cttcccctaa gcctcgattc aagagctatg cctacacaca ggctgcttat gtcaccacct 1081 ctgaccctac acggagccca tttccttcac agcatttgga agctcctgaa gacaagtcat 1141 ttggcagttc attgatggag agtgaagtaa acctggaccg ttatcaaaca gctttagaag 1201 aagtattatc gtggcttctt tctgctgagg acacattgca agcacaagga gagatttcta 1261 atgatgtgga agtggtgaaa gaccagtttc atactcatga ggggtacatg atggatttga 1321 cagcccatca gggccgggtt ggtaatattc tacaattggg aagtaagctg attggaacag 1381 gaaaattatc agaagatgaa gaaactgaag tacaagagca gatgaatctc ctaaattcaa 1441 gatgggaatg cctcagggta gctagcatgg aaaaacaaag caatttacat agagttttaa 1501 tggatctcca gaatcagaaa ctgaaagagt tgaatgactg gctaacaaaa acagaagaaa 1561 gaacaaggaa aatggaggaa gagcctcttg gacctgatct tgaagaccta aaacgccaag 1621 tacaacaaca taaggtgctt caagaagatc tagaacaaga acaagtcagg gtcaattctc 1681 tcactcacat ggtggtggta gttgatgaat ctagtggaga tcacgcaact gctgctttgg 1741 aagaacaact taaggtattg ggagatcgat gggcaaacat ctgtagatgg acagaagacc 1801 gctgggttct tttacaagac atccttctca aatggcaacg tcttactgaa gaacagtgcc 1861 tttttagtgc atggctttca gaaaaagaag atgcagtgaa caagattcac acaactggct 1921 ttaaagatca aaatgaaatg ttatcaagtc ttcaaaaact ggccgtttta aaagcggatc 1981 tagaaaagaa aaagcaatcc atgggcaaac tgtattcact caaacaagat cttctttcaa 2041 cactgaagaa taagtcagtg acccagaaga cggaagcatg gctggataac tttgcccggt 2101 gttgggataa tttagtccaa aaacttgaaa agagtacagc acagatttca caggctgtca 2161 ccaccactca gccatcacta acacagacaa ctgtaatgga aacagtaact acggtgacca 2221 caagggaaca gatcctggta aagcatgctc aagaggaact tccaccacca cctccccaaa 2281 agaagaggca gattactgtg gattctgaaa ttaggaaaag gttggatgtt gatataactg 2341 aacttcacag ctggattact cgctcagaag ctgtgttgca gagtcctgaa tttgcaatct 2401 ttcggaagga aggcaacttc tcagacttaa aagaaaaagt caatgtaggt tatgcattaa 2461 tttttatatc tgtactcatt ttgtgctgct tgtaaactcc gtgctttgtt atctgtgatt 2521 ctactagttg atagattaat gcgatatgat aaaatgctgt ttaatatgtc ttaaaaatat 2581 attttagata gcaagcaaaa tcaaagttta gcctagagaa atctttctgg attcttctgt 2641 gactgactag ggatgccttt cataaacttg ccttaactta catattattt aactataaat 2701 taacaatttt atgacattaa ttcatgttga ttcctttcat atactgttca gttacctcaa 2761 ggctaggcct tagcaagctt gcacaattgt gtagagtaga atagagtaaa atagaataga 2821 ataatataat agataccata cttaggacta tgtctatatt ctcactgtta tcaaaaagtt 2881 attctttata gtcatcaatt cctgtcatat attataagat atttaaattt cccagatatt 2941 tgtgtattac cttatctaaa aggtgtccag cctttctcag tatttacatg tggtagcaga 3001 tgctttgttg ttgttattcc cttctgagat ggtataattt tgaccttcac aaataggaag 3061 ttttattaat ttaatataaa gtgtttcatc tttagggaaa ttgtcaaggc tttaattttt 3121 caacttcaac aattataaaa catgcatctt tgtatatgat tggcaacagt ttgtaaaata 3181 atttctaaca ggcagagtaa ataaaatggg caagctaagg aagcagtgat tatgaatgaa 3241 aagtaatttt atccatggga agatcacatc taaatgtgta tattagctct gctttttctc 3301 tccaggattc aaatcatgaa gttcaaaatc cattgtattt ttacaaatac gacattacct 3361 cagttacaag ctaatgtttg ctgttggggt tggaactttt ggagatcaac aaaagatata 3421 tatatattct ggaaaaaaaa tctatttttt aggctgcttg aaaaagggaa gacaattttg 3481 tcaccagttc ttcttagagt taactactta taaattggaa agctatttta aattacttat 3541 tagctttata agacatgctg ttgtcagcat tataatagac tattctaaat tgtttcaaga 3601 aatgggaaat atgaaaactg aaagataata tataattgta gaaaattagc taaatgtctt 3661 ttttcaagta tacttctttg aaggtaaatt gtttgctgtg atttttgagg gaaattctct 3721 tagtagtaga aaattaatta gagaacatta aactctaatt ttcaaacatc atgttacata 3781 tttgaccact gaaagtatga atcaccttta gcattttatt agctaattaa aaatgattat 3841 tgatctgatt ctcacaaaaa aaaaaaaaaa //