LOCUS BC036098 3311 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens neurocalcin delta, mRNA (cDNA clone MGC:33870
IMAGE:5274150), complete cds.
ACCESSION BC036098
VERSION BC036098.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3311)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3311)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..3311
/db_xref="H-InvDB:HIT000051625"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33870 IMAGE:5274150"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3311
/gene="NCALD"
/gene_synonym="MGC33870"
/gene_synonym="MGC74858"
/db_xref="GeneID:83988"
/db_xref="HGNC:HGNC:7655"
/db_xref="MIM:606722"
CDS 148..729
/gene="NCALD"
/gene_synonym="MGC33870"
/gene_synonym="MGC74858"
/codon_start=1
/product="neurocalcin delta"
/protein_id="AAH36098.1"
/db_xref="GeneID:83988"
/db_xref="HGNC:HGNC:7655"
/db_xref="MIM:606722"
/translation="MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLS
MEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLK
WAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNR
DGKLSMEEFIRGAKSDPSIVRLLQCDPSSAGQF"
BASE COUNT 908 a 717 c 792 g 894 t
ORIGIN
1 acagacgctg ggagcggccg aggcgagtga tttcttctga cttgagcctg cagtgtgctg
61 tgagagatct accactagat tatctcaact ttggtctcct gggaccactc gttgctgaca
121 gtcagaaact gaattcttgc cgccaggatg gggaaacaga acagcaagct gcgcccggag
181 gtcatgcagg acttgctgga aagcacagac tttacagagc atgagatcca ggaatggtat
241 aaaggcttct tgagagactg ccccagtgga catttgtcaa tggaagagtt taagaaaata
301 tatgggaact ttttccctta tggggatgct tccaaatttg cagagcatgt cttccgcacc
361 ttcgatgcaa atggagatgg gacaatagac tttagagaat tcatcatcgc cttgagtgta
421 acttcgaggg ggaagctgga gcagaagctg aaatgggcct tcagcatgta cgacctggac
481 ggaaatggct atatcagcaa ggcagagatg ctagagatcg tgcaggcaat ctataagatg
541 gtttcctctg taatgaaaat gcctgaagat gagtcaaccc cagagaaaag aacagaaaag
601 atcttccgcc agatggacac caatagagac ggaaaactct ccatggaaga gttcatccga
661 ggagccaaaa gcgacccgtc cattgtgcgc ctcctgcagt gcgacccgag cagtgccggc
721 cagttctgag ccctgcgccc accaatcgaa ttgtagagct gcttgtgttc ccttttgatt
781 cttcttttta acaatttttt tttttttgcc aaacaatatc aatggtgatg ccgtcccctg
841 tgcggtctga tgcgccttcc tccgtgacgc cttcagcttc ttttgtcgtg gatgcttcgt
901 gggaatgccc agagccccag tgtgcttgtg gagagcatgg acagacttcg tggtgttcat
961 tgtttgatga tttttaatcg ttactattat ttttttttat tctaatgtct ctgttctaaa
1021 acgtaagact cgggggttgg ggcaaaagaa gggaaaccca tccagtcctg tgattctatt
1081 gcaagcttca aggggctttt gtttgaaaga caaaactccc cacctgggtc tgttgtcaca
1141 cgtgccgtag gggtgatgga tggcaccgga tgctggattc cccaagaaca agttaccctc
1201 tggggtgagg ctattccagc gagctgggac atttccccat gggggcccac tcccctctct
1261 tccccagcag gctgtagttt ctaagctgtg aacatttcaa gataaattaa cagaggagag
1321 gaaaaagatg gctcagctat tttttcacag gtttacacta gttgagctaa tatgcgtgtc
1381 tttggaaatt aaacacaaat ggtaacatat tccaaaacca gacccatctt gttgcctatt
1441 gtgataaaat aaaaagacgg ctgtatataa catattgggt aatgcagacc aaattaagtg
1501 ttttgccttg tttaaatgaa atgcatgttt agtgagcact aatacaatct tattccagaa
1561 gactgttttt agtagcttat tgtgaagtaa gacaactata atgaatgtct gtcttgtttg
1621 gaagtcatat ctgtctttgc acaaatgtac caatcgacaa gtatatttta tatattccat
1681 aaaaatacaa agtaaccctg actagggccc aactttaatt ttgaatgcat ttccagagtg
1741 gccatgccta gagggcagat gcagagcagg tggtagtggg acaggacaat tggagcacag
1801 gaatgttaac atgtatgaca ggggaccagt agggtggttt ccctctcagg cccagcagcc
1861 cattgacagc attagactgg cggcatggtg cttttctgag cagatcaata ctctgcagac
1921 tcgaaaaaac atcacataca ttcttggaac ttcccagtgg tttaatctat gtgcatggtt
1981 agggagccag gtctggaata ttcagtttcc ctgcccctgt taaagaatca gaggttgggc
2041 agtcatcaaa ttcatcataa agacatgggc aagtgtgtct gtggtttcca aggcccccct
2101 atggagaatc caaaagtatt ttccattgcc gtgctctttg aatgcagact tctatttcca
2161 gaagtgacag cacaagtctg agttgctgtt tggtctggtg acctcagaca cactaatttg
2221 aattgaaagc taagagtaaa aatttgctgg ttacaggcga gtcatactct tgcaagtagt
2281 tagcaaaggg aggcccaaat tctcaaggtt gttgatgggg aacttgccac taagagaagg
2341 cagagaggtc cctagtgggt atatttgctg ccaagccact tgccaaagaa gaggaaccac
2401 agaaagagag acatcatgac caggagaaaa atgtgactag acatgctaac ctccaggttt
2461 ttatatatga cttgagtctg ctgtaattgg cagcagaaat ccaaatttgt atggtagacc
2521 aaaaagaacc aaatccatag ggtgaaattt tgagacctag actctgtaaa aataatccta
2581 gtcttcctcc aggggtcagt tcctcacagt ggttctgtac caaaacttgc caaattcctc
2641 catggccaag tgttaaaatc tgtgtttgga aaatagcgaa ttaacctaag acacagaagg
2701 cagactgggt gaggagacct agcatgccct attggcagtg ctcaggagct gcatcccact
2761 tttccctgct ctgaatcgaa gtcctagttc cttcctttga ttctcctttg gtaggtggaa
2821 tcagttaatg ttttgagaaa cctgcctggg ctctgccctt agtcatgaca tctcgctgag
2881 ccagacccac tctgttcctt ggaacctaga gctggagtga ggagtagagg tctccggcta
2941 ttccagaaag aaaagtgagc cacatgcagg ctgatgaatg ccgacacttc cagaatgtat
3001 agaaatagtc cctgtcctgg cctgccactg accctgtctg tattttctcg gaggttgttt
3061 ttctccttct ccttcccagg aaggtctttg tatgtcgaat ccagtgcact caagtttggc
3121 caagggactc cacagcaccc agaagactgc atgcctcaag gtttatgtca ctcctctgct
3181 gggctgttca ttgtcattgc tgtgttcagg gacctttgga aataaaacct gttctgtccc
3241 aaataaaacc agcctgtgat gttcaaggga ctggaataaa gtggcttacg acccgaaaaa
3301 aaaaaaaaaa a
//