LOCUS       BC036083                2812 bp    mRNA    linear   HUM 28-JUL-2005
DEFINITION  Homo sapiens solute carrier family 6 (neurotransmitter transporter,
            GABA), member 11, mRNA (cDNA clone IMAGE:5313099), complete cds.
ACCESSION   BC036083
VERSION     BC036083.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2812)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2812)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 48 Row: p Column: 12
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 7657586
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..2812
                     /db_xref="H-InvDB:HIT000051616"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:5313099"
                     /tissue_type="Brain, hypothalamus"
                     /clone_lib="NIH_MGC_96"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..2812
                     /gene="SLC6A11"
                     /gene_synonym="GAT-3"
                     /gene_synonym="GAT3"
                     /db_xref="GeneID:6538"
                     /db_xref="MIM:607952"
     CDS             66..692
                     /gene="SLC6A11"
                     /gene_synonym="GAT-3"
                     /gene_synonym="GAT3"
                     /codon_start=1
                     /product="SLC6A11 protein"
                     /protein_id="AAH36083.1"
                     /db_xref="GeneID:6538"
                     /db_xref="MIM:607952"
                     /translation="MTAEKALPLGNGKAAEEARESEAPGGGCSSGGAAPARHPRVKRD
                     KAVHERGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIP
                     VFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSN
                     CFTTELPWATCGHEWNTENCVEFQKLNVSNYSHVSLQNATSPVMEFWE"
BASE COUNT          706 a          556 c          705 g          845 t
ORIGIN      
        1 aaaagccagc tcgcccgggg cggcggcgca gagccgggcc ggcgcacgag gcagccagcg
       61 cggccatgac ggcggagaag gcgctgcccc tgggcaatgg gaaggctgct gaggaggcgc
      121 gggagtccga ggcgccgggt ggcggctgca gcagcggggg cgcggcgccc gcgcgccacc
      181 cgcgcgtcaa gcgcgacaag gcggtccacg agcgcggcca ctggaacaac aaggtggagt
      241 tcgtgctgag cgtggccggg gagatcattg ggctgggcaa cgtgtggcgc ttcccctacc
      301 tgtgctacaa gaacggagga ggggcattcc tgattcccta cgtggtgttt tttatttgct
      361 gtggaattcc tgtttttttc ctggagacag ctctggggca gttcacaagt gaaggtggca
      421 ttacgtgttg gaggaaagtt tgccctttat ttgaaggcat tggctatgca acacaggtga
      481 ttgaggccca tctgaatgtg tactacatca tcatcctggc atgggccatt ttttacctga
      541 gcaactgctt cactactgag ctaccctggg ctacctgtgg gcatgagtgg aacacagaga
      601 attgtgtgga gttccagaaa ctgaatgtga gcaactacag ccatgtgtct ctgcagaatg
      661 ccacctcccc tgtcatggag ttttgggagt aagtggagaa gaacttgtct cccttggcct
      721 gtgggggctc tgtcctggtt ctgctcagtt ggtcttgccc ctattcctgg aaaaagcctg
      781 atccttcttg cagcctggca cttcctggct tctgtgagca ttcgacagct tcggaagcaa
      841 gagtgcagat cttcagaggt ttcccaaagg ggcagctgag agaaatgttt tcttgttctt
      901 tgataacatg tcagcatgca tagtgggtta ttagggcagg aagtacttgg tgaaaggata
      961 gacagtttaa aaattcattt tgagcaaaag aggagatgca gcctgtttgc aataagctaa
     1021 gtcaagagtg tatttagcct ggaaagcata agtctctaga ggggataggt tagctttctt
     1081 tcagtagctg aagtgtcata tggaaaagaa ggagatcaaa tttaatggat agagattata
     1141 aagaggcagg tttcaaatgt gcgtagggaa gaacttggtc tcatagcata gcattatctg
     1201 gaagcacttc agaaggttgt gagcacccat ccctggaagt tgaccagtat agggttgcca
     1261 atcattgttg ggggtgtgtc tgaatccact gaaattataa gtagtacttg tgtggttggg
     1321 cattttccca gaaattggca tagttttatc agagttccaa aggatctgtg acccttacag
     1381 ggctgctatg tgtggttgtg tacattgcac actgaacaac ccaaggggcc ataatttaca
     1441 ttatgaaata tacattccag aattgtgtgg tgcacgacct gtataaccat acacagtggc
     1501 cctgacttgc aagtttgttt taaaggtaga aggatcactt gccccaggta ttggaaagaa
     1561 gtttcctgta tgggtcaaag gctggactaa atgctttctg aagcttttca atctaaaaag
     1621 tcctggcttc attgaagaag cctcccttac tctgatggtg attaatagta gtatatgtgt
     1681 gtgtggtggg gcagtggttt atgagtgatt tttatttttt tcccagatac cattcgtctc
     1741 ctgccttctc tagaggtcat tatgctgaat ttagatttac cactctcata taaatcttca
     1801 tacttttcat atatatatgc cccaaatagc acctaggtct ttattgcata tttttcaaat
     1861 ttgtgatact ggcatccatt atttacattt tttataacaa ctttatttct ttgctcaata
     1921 ttggttctta gatgtatcca tattggtaca tgtagctttg gttctttcat ttttctatca
     1981 gagtatttca ttgtatgaat ggcctgtgtt gtatttatcc aggtcctctt ggtcctcttg
     2041 atgggcattt aggctgttgc ccatttctca ctattattaa gcacactgag tgaatgtcta
     2101 gtctgtgctt ccttgagtgg aattgctggg ttgtagcata catgcgttgt cagttttatc
     2161 atataacgta aaattacttt agaaagaaat taatctaggc caggcatggt ggctcacacc
     2221 tgtaattcca gcactttggg aagccgaggt gggcggatca cctgaggtca ggagtttgag
     2281 accagcctgg ccaacatggt gaaaccctgt ctttactaaa aatacaaaaa ttagctgggt
     2341 agtggttcat gcctgcaatc tcatctactc aggaggttga agcaggagaa tcacttgaac
     2401 ctggaaggcg aaagttgcag tgagccgaga tcggcgccac tgcactccag cctgggtgac
     2461 agagcgagac tgtctcaaaa aaaaaaaaaa aaaaattaat ctacactcca aacaagagtt
     2521 tgtgagaatt tctgcagctt cacattttgg acagcacttg gtctgttcag tttttgtttt
     2581 gccagtgtaa tgggcattaa atgataactt actattttaa attcacattt ctctaattac
     2641 ttgtgaggtt aagcaccttt tcatgttttg ttttgtctgt tttttgctat ttgatttctg
     2701 tacctgtgaa cttcaggttt acattcgttt ctatttggat agtttgtctt ttcttacaga
     2761 tagaaattgt taatacattc tagatattat cttttcaaaa aaaaaaaaaa aa
//