LOCUS BC036071 3951 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 (Hu antigen D), mRNA (cDNA clone MGC:33705
IMAGE:5286347), complete cds.
ACCESSION BC036071
VERSION BC036071.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3951)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3951)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: i Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361338.
FEATURES Location/Qualifiers
source 1..3951
/db_xref="H-InvDB:HIT000051610"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33705 IMAGE:5286347"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3951
/gene="ELAVL4"
/gene_synonym="PNEM"
/db_xref="GeneID:1996"
/db_xref="MIM:168360"
CDS 229..1329
/gene="ELAVL4"
/gene_synonym="PNEM"
/codon_start=1
/product="ELAVL4 protein"
/protein_id="AAH36071.1"
/db_xref="GeneID:1996"
/db_xref="MIM:168360"
/translation="MVMIISTMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDS
KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK
AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT
SRILVGQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS
QALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIP
GHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNY
DEAAMAITSLNGYRLGDRVLQVSFKTNKAHKS"
BASE COUNT 1290 a 710 c 740 g 1211 t
ORIGIN
1 atcctagaat cgggggtttc agctcactgc tccttttctt ttttttcttt ctctcccccg
61 ccaacccccc caaaaataat tgatttgctt tacaatcatc cacactgtgt tttgtggatc
121 tttaattata tataacaata gtagtcattt taaatatata ttctgaaatc tttgcaaatt
181 ttaacagaag agtcgaagct ctgcgagacc caatatttgc caataagaat ggttatgata
241 attagcacca tggagcctca ggtgtcaaat ggtccgacat ccaatacaag caatggaccc
301 tccagcaaca acagaaactg tccttctccc atgcaaacag gggcaaccac agatgacagc
361 aaaaccaacc tcatcgtcaa ctatttaccc cagaatatga cccaagaaga attcaggagt
421 ctcttcggga gcattggtga aatagaatcc tgcaaacttg tgagagacaa aattacagga
481 cagagtttag ggtatggatt tgttaactat attgatccaa aggatgcaga gaaagccatc
541 aacactttaa atggactcag actccagacc aaaaccataa aggtctcata tgcccgtccg
601 agctcagcct caatcaggga tgctaacctc tatgttagcg gccttcccaa aaccatgacc
661 cagaaggaac tggagcaact tttctcgcaa tacggccgta tcatcacctc acgaatcctg
721 gttggtcaag tcacaggagt gtccagaggg gtgggattca tccgctttga taagaggatt
781 gaggcagaag aagccatcaa agggctgaat ggccagaagc ccagcggtgc tacggaaccg
841 attactgtga agtttgccaa caaccccagc cagaagtcca gccaggccct gctctcccag
901 ctctaccagt cccctaaccg gcgctaccca ggtccacttc accaccaggc tcagaggttc
961 aggctggaca atttgcttaa tatggcctat ggcgtaaaga ggttctcccc aattaccatt
1021 gatggaatga caagccttgt gggaatgaac atccctggtc acacaggaac tgggtggtgc
1081 atctttgtct acaacctgtc ccccgattcc gatgagagtg tcctctggca gctctttggc
1141 ccctttggag cagtgaacaa cgtaaaggtg attcgtgact tcaacaccaa caagtgcaag
1201 ggattcggct ttgtcaccat gaccaactat gatgaggcgg ccatggccat caccagcctc
1261 aacgggtacc gcctgggaga cagagtgttg caagtttcct ttaaaaccaa caaagcccac
1321 aagtcctgaa tttcccattc ttacttacta aaatatatat agaaatatat acgaacaaaa
1381 cacacgcgcg cacacacaca catacacgaa agagagagaa acaaactttt caaggcttat
1441 attcaaccat ggactttata agccagtgtt gcctaagtat taaaacattg gattatcctg
1501 aggtgtacca ggaaaggatt ttataatgct tagaaaaaaa agaaaaaaaa aaaacaaaaa
1561 atacctttga tgcattgaat gttctttcat agctgtcgtt gttgaatata atatacatag
1621 atagcgatgt gcagggattt ttacccagcc agctaacttt actaccttcc ttgaaggtgg
1681 atctttttaa gatgaccatt cgctcatttg aagaagaaaa acaaaaaaca aaaaaaataa
1741 taaaaataaa acaattttta caaagtaatg ggattcaaag aaaggaaaaa aagatttttc
1801 ttttttgtca aaatatcgat ccaatcagat tggtaaaaac ccccacacaa attaaagagg
1861 aataataaaa attgcaaaaa taaaaaaaaa cttttgcaaa tttttttatt tttccttctt
1921 tcttttatat catgtgaact aaaacagtct tctgttaggg gatgggggca agggggatac
1981 ctgatgacat taacaattta ataacattaa cattgttgcc aaagaggtgg tctctttgct
2041 gaaaatgggt ttcaagaaaa atctattttt ataaaatata aagaattttt acaagagaat
2101 ctggatttga gaaaaaaata ttttgactgg ctaatttagg ggaaattgac aactttgtcg
2161 cgttcatact gcactggtaa ctttttagag atcaagatgt gtgttttaaa ctggattcgt
2221 agactgtttt ttgagggatg ggctataaac agatgatctt catatctttt catagcatgt
2281 aataataatt aaaaaacaat tattaattac taggggaaag gagtgttcgt tctacccagg
2341 gtaccacagt tccccacagt caaaacccaa aagcaaggag atgagttgaa agacagtttt
2401 tctttaagtc atcagtatgg gatgtcagca gaacaaaaat taaaaagatt aattttcctt
2461 ttgatctaaa acttccttag tttgagcagt aggtgctaca aaattattta catatcttag
2521 tatcatagtt aaatgtaatg tgtttaggag aggaaaacaa aagatacatt tgctttaaat
2581 tcattaagaa attttcaaat tcactttgta gcccatgctg atagaattgg gctgtgttgg
2641 tacatttgaa acactgttta tgttgcttga aacacttatt tatttaatcg ccgatgtgat
2701 gatgcctatg gccgagatca aatatagcta gattggctag actacttatt tgtttactta
2761 aactatggga agaagcatat tattgtgtca ttctgttgtg tgtgtatgtg tatatacaat
2821 ataaatatat atatataaag ttattttttc tttgggttaa tttattataa gttgtaacac
2881 ttggctagtt ttgtttgtat atgtcttaaa atgttttctt atgatattta agtgacagtt
2941 aaagaggtat caaggtaact tgtgtagaac tattctttga tatattgtca tgtttgttgt
3001 gaatattttt tcttactgca cagtagaaaa ataaaaacaa ctgagtcttt attttaatgt
3061 aactcagatt ggggaaaaca aaacagagct aagggaacaa aatgactgag ggagcactct
3121 cccacgtcca gtgcactgat cattttagta tgtttgtgct ttgtacggtt atatatttaa
3181 aacgaaaaca aaacaaaaaa atacaagggt tcatgctctt ccctgggtaa tagaaacagt
3241 tactcgctat gcataatcta gttgatagtt aaatttgcta ttgcttttat tgtcttgtta
3301 tataaaatct tttcaataca agtttagtct taatggtaat aaaacgttat ggttatttat
3361 aacttgtgct tattttgtgc attttttccc atgctgaacc cactaagtgc atgtagacag
3421 gactgttgtt ttcacactga aaaggcaaac tttgtagtag tcgttgtagt ggtagacaga
3481 taacgaatac caaggctgca tcatagactc ctcctttaaa ttttttttct gttttttttt
3541 cctcttttcg gttttggata taacaccaga tttcagttca gagaacactc gttcaacatt
3601 cagggaaagc tttttacgtc acctgctatg aatgaacgta gtttgctggc aaagttttga
3661 tgcatttgct aagcattagt gggaaaggca tgccaaaatc ttctctataa tgtgttcaat
3721 cttgggggaa aaaaaaagga aaaaaaatct taggaccagg cagttgtata ctttagttat
3781 taatgaatga cttcatgtta atcttgctag tttagatgat ttccaaggga aagtattgta
3841 aatgtttttt tttcataatc ttgttgtgtt tgaattattt gtactttatc tgtccagaca
3901 ataaatgaaa gtgtgtagaa tggatttgac ttcccaaaaa aaaaaaaaaa a
//