LOCUS BC036057 2896 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens homeodomain interacting protein kinase 1, mRNA (cDNA
clone MGC:33446 IMAGE:5272816), complete cds.
ACCESSION BC036057
VERSION BC036057.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2896)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2896)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: e Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38201643.
FEATURES Location/Qualifiers
source 1..2896
/db_xref="H-InvDB:HIT000051605"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33446 IMAGE:5272816"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2896
/gene="HIPK1"
/gene_synonym="KIAA0630"
/gene_synonym="MGC26642"
/gene_synonym="MGC33446"
/gene_synonym="MGC33548"
/gene_synonym="Myak"
/gene_synonym="Nbak2"
/db_xref="GeneID:204851"
/db_xref="HGNC:HGNC:19006"
/db_xref="MIM:608003"
CDS 64..2514
/gene="HIPK1"
/gene_synonym="KIAA0630"
/gene_synonym="MGC26642"
/gene_synonym="MGC33446"
/gene_synonym="MGC33548"
/gene_synonym="Myak"
/gene_synonym="Nbak2"
/codon_start=1
/product="homeodomain interacting protein kinase 1"
/protein_id="AAH36057.1"
/db_xref="GeneID:204851"
/db_xref="HGNC:HGNC:19006"
/db_xref="MIM:608003"
/translation="MVLMFQIRYISQTQGLPAEYLLSAGTKTTRFFNRDPNLGYPLWR
LKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLK
KMLTIDADKRITPLKTLNHQFVTMTHLLDFPHSNHVKSCFQNMEICKRRVHMYDTVSQ
IKSPFTTHVAPNTSTNLTMSFSNQLNTVHNQASVLASSSTAAAATLSLANSDVSLLNY
QSALYPSSAAPVPGVAQQGVSLQPGTTQICTQTDPFQQTFIVCPPAFQTGLQATTKHS
GFPVRMDNAVPIVPQAPAAQPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFT
LSCAAGRPALVEQTAAVLQAWPGGTQQILLPSTWQQLPGVALHNSVQPTAMIPEAMGS
GQQLADWRNAHSHGNQYSTIMQQPSLLTNHVTLATAQPLNVGVAHVVRQQQSSSLPSK
KNKQSAPVSSKSSLDVLPSQVYSLVGSSPLRTTSSYNSLVPVQDQHQPIIIPDTPSPP
VSVITIRSDTDEEEDNKYKPSSSGLKPRSNVISYVTVNDSPDSDSSLSSPYSTDTLSA
LRGNSGSVLEGPGRVVADGTGTRTIIVPPLKTQLGDCTVATQASGLLSNKTKPVASVS
GQSSGCCITPTGYRAQRGGTSAAQPLNLSQNQQSSVAPTSQERSSNPAPRRQQAFVAP
LSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQAHLYTYAAPTSAAALGSTSSIAHLFS
PQGSSRHAAAYTTHPSTLVHQVPVSVGPSLLTSASVAPAQYQHQFATQSYIGSSRGST
IYTGYPLSPTKISQYSYL"
BASE COUNT 734 a 808 c 619 g 735 t
ORIGIN
1 agattgtttc acatcaccag tgtatcctca gctcctaaca ctgtgtctgg tacacattgt
61 ttgatggttt tgatgtttca gattcgttat atttcacaaa cacaaggctt gccagctgaa
121 tatcttctca gtgccggaac aaaaacaacc aggtttttca acagagatcc taatttgggg
181 tacccactgt ggaggcttaa gacacctgaa gaacatgaac tggagactgg aataaaatca
241 aaagaagctc ggaagtacat ttttaattgc ttagatgaca tggctcaggt gaatatgtct
301 acggacctgg agggaacaga catgttggca gagaaggcag accgaagaga atacattgat
361 ctgttaaaga aaatgctcac aattgatgca gataagagaa ttacccctct aaaaactctt
421 aaccatcagt ttgtgacaat gactcacctt ttggattttc cacatagcaa tcatgttaag
481 tcttgttttc agaacatgga gatctgcaag cggagggttc acatgtatga tacagtgagt
541 cagatcaaga gtcccttcac tacacatgtt gccccaaata caagcacaaa tctaaccatg
601 agcttcagca atcagctcaa tacagtgcac aatcaggcca gtgttctagc ttccagttct
661 actgcagcag ctgctactct ttctctggct aattcagatg tctcactact aaactaccag
721 tcagctttgt acccatcatc tgctgcacca gttcctggag ttgcccagca gggtgtttcc
781 ttgcagcctg gaaccaccca gatttgcact cagacagatc cattccaaca gacatttata
841 gtatgtccac ctgcgtttca aactggacta caagcaacaa caaagcattc tggattccct
901 gtgaggatgg ataatgctgt accaattgta ccccaggcac cagctgctca gccactacag
961 attcagtcag gagttctcac gcagggaagc tgtacaccac taatggtagc aactctccac
1021 cctcaagtag ccaccatcac accgcagtat gcggtgccct ttactctgag ctgcgcagcc
1081 ggccggccgg cgctggttga acagactgcc gctgtactgc aggcgtggcc tggagggact
1141 cagcaaattc tcctgccttc aacttggcaa cagttgcctg gggtagctct acacaactct
1201 gtccagccca cagcaatgat tccagaggcc atggggagtg gacagcagct agctgactgg
1261 aggaatgccc actctcatgg caaccagtac agcactatca tgcagcagcc atccttgctg
1321 actaaccatg tgacattggc cactgctcag cctctgaatg ttggtgttgc ccatgttgtc
1381 agacaacaac aatccagttc cctcccttcg aagaagaata agcagtcagc tccagtctct
1441 tccaagtcct ctctagatgt tctgccttcc caagtctatt ctctggttgg gagcagtccc
1501 ctccgcacca catcttctta taattccttg gtccctgtcc aagatcagca tcagcccatc
1561 atcattccag atactcccag ccctcctgtg agtgtcatca ctatccgaag tgacactgat
1621 gaggaagagg acaacaaata caagcccagt agctctggac tgaagccaag gtctaatgtc
1681 atcagttatg tcactgtcaa tgattctcct gactctgact cttctttgag cagcccttat
1741 tccactgata ccctgagtgc tctccgaggc aatagtggat ccgttttgga ggggcctggc
1801 agagttgtgg cagatggcac tggcacccgc actatcattg tgcctccact gaaaactcag
1861 cttggtgact gcactgtagc aacccaggcc tcaggtctcc tgagcaataa gactaagcca
1921 gtcgcttcag tgagtgggca gtcatctgga tgctgtatca cccccacagg gtatcgagct
1981 caacgcgggg ggaccagtgc agcacaacca ctcaatctta gccagaacca gcagtcatcg
2041 gtggctccaa cctcacagga gagaagcagc aacccagccc cccgcaggca gcaggcgttt
2101 gtggcccctc tctcccaagc cccctacacc ttccagcatg gcagcccgct acactcgaca
2161 gggcacccac accttgcccc ggcccctgct cacctgccaa gccaggctca tctgtatacg
2221 tatgctgccc cgacttctgc tgctgcactg ggctcaacca gctccattgc tcatcttttc
2281 tccccacagg gttcctcaag gcatgctgca gcctatacca ctcaccctag cactttggtg
2341 caccaggtcc ctgtcagtgt tgggcccagc ctcctcactt ctgccagcgt ggcccctgct
2401 cagtaccaac accagtttgc cacccaatcc tacattgggt cttcccgagg ctcaacaatt
2461 tacactggat acccgctgag tcctaccaag atcagccagt attcctactt atagttggtg
2521 agcatgaggg aggaggaatc atggctacct tctcctggcc ctgcgttctt aatattgggc
2581 tatggagaga tcctccttta ccctcttgaa atttcttagc cagcaacttg ttctgcaggg
2641 gcccactgaa gcagaaggtt tttctctggg ggaacctgtc tcagtgttga ctgcattgtt
2701 gtagtcttct caaagtttgc cctattttta aattcattat ttttgtgaca gtaattttgg
2761 tacttggaag agttcagatg cccatcttct gcagttacca aggaagagag attgttctga
2821 agttaccctc tgaaaaatat tttgtctctc tgacttgatt tctataaatg cttttaaaaa
2881 caaaaaaaaa aaaaaa
//