LOCUS BC036019 2663 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens X-linked Kx blood group (McLeod syndrome), mRNA (cDNA
clone MGC:32986 IMAGE:5272840), complete cds.
ACCESSION BC036019
VERSION BC036019.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2663)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2663)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: e Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18860914.
FEATURES Location/Qualifiers
source 1..2663
/db_xref="H-InvDB:HIT000051585"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32986 IMAGE:5272840"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2663
/gene="XK"
/gene_synonym="KX"
/gene_synonym="X1k"
/gene_synonym="XKR1"
/db_xref="GeneID:7504"
/db_xref="HGNC:HGNC:12811"
/db_xref="MIM:314850"
CDS 124..1458
/gene="XK"
/gene_synonym="KX"
/gene_synonym="X1k"
/gene_synonym="XKR1"
/codon_start=1
/product="X-linked Kx blood group (McLeod syndrome)"
/protein_id="AAH36019.1"
/db_xref="GeneID:7504"
/db_xref="HGNC:HGNC:12811"
/db_xref="MIM:314850"
/translation="MKFPASVLASVFLFVAETTAALSLSSTYRSGGDRMWQALTLLFS
LLPCALVQLTLLFVHRDLSRDRPLVLLLHLLQLGPLFRCFEVFCIYFQSGNNEEPYVS
ITKKRQMPKNGLSEEIEKEVGQAEGKLITHRSAFSRASVIQAFLGSAPQLTLQLYISV
MQQDVTVGRSLLMTISLLSIVYGALRCNILAIKIKYDEYEVKVKPLAYVCIFLWRSFE
IATRVVVLVLFTSVLKTWVVVIILINFFSLFLYPWILFWCSGSPFPENIEKALSRVGT
TIVLCFLTLLYTGINMFCWSAVQLKIDSPDLISKSHNWYQLLVYYMIRFIENAILLLL
WYLFKTDIYMYVCAPLLVLQLLIGYCTAILFMLVFYQFFHPCKKLFSSSVSEGFQRWL
RCFCWACRQQKPCEPIGKEDLQSSRDRDETPSSSKTSPEPGQFLNAEDLCSA"
BASE COUNT 642 a 629 c 622 g 770 t
ORIGIN
1 agagggcggg agcggtttgg ggctgggcat gctgggagcc cctcgggcaa cggccgccgc
61 cgccacagcc acacagccgc cgccactgcg tccgtccccg gtgagcgccg ctgacgcgcg
121 gagatgaaat tcccggcctc ggtgctggcg tccgtgttcc tgttcgtggc cgagacaacg
181 gcggcgctca gcctgagcag cacctaccgc tcgggcgggg accgcatgtg gcaggcgctg
241 acgttgcttt tctcgctact gccttgcgcg ctcgtgcagc tcacgcttct cttcgtacac
301 cgcgacctca gccgcgaccg cccgctcgta ctgctgctgc acctgctgca acttgggccc
361 cttttcaggt gttttgaagt cttctgcatc tactttcagt caggcaacaa tgaagagcct
421 tatgtcagta tcaccaagaa gaggcaaatg ccaaaaaatg gcctctcaga ggagattgag
481 aaggaggtgg gccaggcaga aggcaaacta atcacccacc gatcagcgtt cagccgggcg
541 tcggtgatcc aggctttctt gggctcagcc ccccagctga ccctacagct gtacataagt
601 gtcatgcagc aggacgtcac tgttggaaga agtctcctca tgaccatatc cctgttgtcc
661 attgtgtatg gagccttgcg ctgcaacatc ctagccatca aaatcaagta cgatgagtat
721 gaagtcaaag tgaagcctct ggcctatgtc tgtatcttcc tgtggaggag ctttgagatt
781 gccactcgag ttgtagtcct ggtcctcttt acctccgtcc tgaagacctg ggtggtggtt
841 ataatactca tcaacttctt cagtttgttc ttgtacccct ggatcctctt ctggtgcagt
901 ggttccccat tccctgagaa catagagaag gccctcagta gagtgggcac caccattgta
961 ctatgctttc taactttact ctatactggt atcaacatgt tctgctggtc tgctgtacag
1021 ctgaaaattg acagccctga cctcatcagc aagtcccata attggtacca gctactggtg
1081 tattacatga taagattcat cgagaatgcc atcctcctcc tcctgtggta tcttttcaag
1141 actgacatct atatgtatgt gtgcgcacct ctgttggtcc tgcagctgct cattgggtac
1201 tgcacagcca ttctcttcat gcttgtattc tatcagttct tccacccttg caaaaagctc
1261 ttttcttcca gtgtttctga aggctttcag aggtggctca ggtgtttttg ctgggcctgc
1321 aggcagcaaa aaccctgtga gccgatagga aaggaagatc tacagtcatc cagagataga
1381 gatgagacac cttctagcag taaaacaagt cctgagcctg gtcagttctt gaatgctgaa
1441 gatctctgct ctgcttaatg ggacccaagg tctcagagca caggcatatt attttctggg
1501 tttgatactc gttattcata caaataatga gccctacaca gggaacaagg caggaagtta
1561 gctgttaact ccttgtgagc tgcttctctt tatagagctc ttgggtatgt agaactgtat
1621 gggaagaagc caggaaaacc tctgagtgtt gaaggggcaa cccaaggcat cacagttcac
1681 aggtaaccat gttgtgttct tctaggcatt actggccttt tcactgacaa gttacccctg
1741 aaatctgagt tgtactggtt agattcatta ggttgaatga ggagaggggc ttacctgttc
1801 tctagttttc cagactgctg gtttgggtaa cctgaagttt tatgatccct gaacatagtt
1861 ttcacccaag agctgtcctg gtgaccaaaa aagattacta gggttttgcc atcagcaaca
1921 tcattcctgt cagagctttc agggagggct gttcaagttt ggtttttgaa tagacagagg
1981 tttcattttc atctcattag ggcttttttg tacatagcca actgtagcca ccctggcatg
2041 ctgtctctaa ttgattcaag ggcctagatt tggagacttt gttccttagc atccatggat
2101 gcagaaatga gtgataaatt tggccatgaa agccctggaa ttttaggaaa gttgtgattc
2161 tttgatatgt tgatgaaatt ctggatcagg aggggtgtta aaacatcaaa atgatggcga
2221 cttgtataag tagaattctt accatcttac tcctgcctcc ccattccttg cctgtcagga
2281 ccattttaga agagttacct tggttaactt aagggttttt tagaaaaccc cacagaaatc
2341 tctcacccag ttcaggtgta tagggaattt tcattttcat tatttcaagg aatagagttt
2401 tcctcactac cacttgtaat tagagattga cttcagaaac tttttctaaa ttataaagac
2461 ggaatgacca gaaaattttt gtctttcatg gaatgcaatt tgacttggca taattgtgag
2521 ttaatttgat aaagatctcc agttgtatcc tctgacaccc tttaatgttc tatataattt
2581 ttcctttaat cggagaccct atttgtttca ttaaagagga ttgggtagca tatcctcaat
2641 tatcttggaa aaaaaaaaaa aaa
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