LOCUS BC036018 3014 bp mRNA linear HUM 16-DEC-2006
DEFINITION Homo sapiens protein tyrosine phosphatase, receptor type, G, mRNA
(cDNA clone IMAGE:5278250), complete cds.
ACCESSION BC036018
VERSION BC036018.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3014)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3014)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: h Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18860897
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..3014
/db_xref="H-InvDB:HIT000094217"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5278250"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3014
/gene="PTPRG"
/gene_synonym="HPTPG"
/gene_synonym="R-PTP-GAMMA"
/gene_synonym="RPTPG"
/db_xref="GeneID:5793"
/db_xref="HGNC:HGNC:9671"
/db_xref="MIM:176886"
CDS 720..962
/gene="PTPRG"
/gene_synonym="HPTPG"
/gene_synonym="R-PTP-GAMMA"
/gene_synonym="RPTPG"
/codon_start=1
/product="PTPRG protein"
/protein_id="AAH36018.1"
/db_xref="GeneID:5793"
/db_xref="HGNC:HGNC:9671"
/db_xref="MIM:176886"
/translation="MRRLLEPCWWILFLKITSSVLHYVVCFPALTEGYVGALHENRHG
SAVQIRRRKASGDPYWAYSGFCSVAQAGVQYTLAQS"
BASE COUNT 690 a 682 c 718 g 924 t
ORIGIN
1 acatgttact tcctgtatgg aggcatggcc agtttccagc cccgcgctct tcgttccttc
61 ccagcctgcg ccggagccac aactttcagg agcatggact gaaggcgccc tcgccccagc
121 gcccctctga gatcctttgt gttttcctcc gtttcctccg gccgtttcta ttttgggggg
181 ctctccgctc cccctgcctc tcccctcccc ttcccctctc gcaaacatgc ctccttcctt
241 cccggggccc tggaaggagc tgcctgcctg aagcccggag acgccgcgcc gcgctcagcc
301 ccgccgccgc ccgccggctc tcgggctgtg ctgcgctgcc gactcaagtt ggggatcctc
361 ggctgctcgc cgccgccgcc cgcggtccct gcctgcccca ggcccggggc atcgccgccg
421 gccgccgact ccgcgccctg cccgatcggc tctctccttt ttaaacggaa agcagccttt
481 ctccgccgag aggatcgtcc ccagcgtggc tctgcgttcc cggtcacttt ttgagatttt
541 ccggggggcg ctcggcggct tcccggattc caaggggact cgggccgcag agcgcggggg
601 gcccgtggag cgggcgagcc ggggaagcgc cccggcttag cggaggctcg cacggaggca
661 agaacttatt caacaagttt acctccctgc tttcctcttt tcgatgtgcg ttttcggaca
721 tgcggaggtt actggaaccg tgttggtgga ttttgttcct gaaaatcacc agttccgtgc
781 tccattatgt cgtgtgcttc cccgcgttga cagaaggcta cgttggggcc ctgcacgaga
841 atagacacgg cagcgcagtg cagatccgca ggcgcaaggc ttcaggcgac ccgtactggg
901 cctactctgg gttttgctct gtcgcccagg ctggagtgca gtatactttg gcccagtcat
961 agcccgctgg agccttgacc tcctgggctc gtgattgttc cacctcagct tcctgggtgg
1021 ctgggactgc aggtgtgtgc caccacgcct ggctaatttg ttctttttca tagagatgga
1081 gtctcactgt gttgcccggg ctggcctcga gttcctggcc ttaggcgatc ctcccggctt
1141 agccttgcaa agtggtggga ttataaatgt gtgacaccac acttagatgc ccactaatgg
1201 tttggtgaaa ggattaaacc ccccaagaac tgaattttca gtaataagga attgaagatt
1261 ttagtcaagc cagagcacac atgattgaac ttcagcagtg agggtaccaa agaatattac
1321 atttggaaat taaattttaa gagagaagag gaaaaaaact gggcgtagag agtatgggga
1381 gagaataaaa tatggtgaat atggtgatgt gattcttgaa ctgtcctttt gtttttttct
1441 gactgtaaag agtagcacat tccgcaatta gacaatcaga agtgttttca gatgttccca
1501 cctatcccct ggggagtcag gggcagactc ctttttggta gagaaccctc tgctgtagaa
1561 cgtgcaagaa ataataataa atagtaatag tatggaagag tatagaatta ttacatggta
1621 aaggtggctg tgatttttga ccagataagc ttatttagcc aattccagaa gtttccttat
1681 tgcaaagtgg gcggatttta agtgttcctt accaattgtt aaatgtggtg agatggattt
1741 tatttccctt ggattcgtgc tatatctgcc atggaaagcc tgggtggtgt tgattgtagc
1801 tcagattgaa aatgacagcc aggagttgct tagttaatgg ggtatatgtt ggtcctcaat
1861 ttgtgcaatt cattgtttaa tgtgaatgaa taatttaggg atgaatgatt gggttcattt
1921 ttagacactg gctaccttaa caggatgata gttgacagag cttcatgtta tatttcctca
1981 cgtgaagagc taaagttgtt gcccaggtta agtcaaaaca ttagacaagg tcataatgtt
2041 aattatttga atatgttaaa ctgctgaata tacatacgtt ggtgcaaaag taattgcaat
2101 cttttgcacc aacttaatat atacacaagt gtatatatat ttgtgtggtg gtaggactaa
2161 ttacttaaat aatttttctc aactttgcat atactttttt cttcctgcat ttaatctagt
2221 ttcatttgga ttatgtctag tttctgtgga agtagcttca taaataattt aaatgatctt
2281 tgatttgaga ctgactctta aaaatggaaa ttgcatttat ctgggttaga attttatcta
2341 ggattttaat ttaatagctg ttatttttac tttcaaattc atattttaat acaattaaaa
2401 gttgggtttt ttaatttggg gacagacagc aagctgtttt attttatttt tgcctgccaa
2461 ggaatgcttt ttccttgaca cggacaaggg tgctctttct ttttctgttc tagctctcct
2521 gtgtcttgga cttcttaatt ctttctggtg ggatttttct cccttccttc tttacctttc
2581 actagagata gagttatcct ttcttctggc tcttgtttcc ctcccaagac agctacatct
2641 caccatttgc cttggcctcc tttatttctc cttctattca tcttttgtac ttggagtggt
2701 ccgcaaggtg aggagagttg agctcaatga aaagaaggta gatttttgcc ttttttatgc
2761 agaacaatgt cttcaaaaaa atcagaacag aaaaaataag atgcattcta atggatcttt
2821 gacacttttt ggtaatgaag cttttagttc ccatagagtt gtgtgtaggt cagaaaatct
2881 gccaagtttc ttactctatg ttcagctcaa gtttgctctg gcaccaaaga ggagagaaac
2941 ggggggttgc agaaaacagg gggttgagag ctttatcttt ttgtccttta ctttcatcta
3001 aaaaaaaaaa aaaa
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