LOCUS BC035937 2777 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens leucine rich repeat containing 56, mRNA (cDNA clone
MGC:25996 IMAGE:4816105), complete cds.
ACCESSION BC035937
VERSION BC035937.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2777)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2777)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: m Column: 12.
FEATURES Location/Qualifiers
source 1..2777
/db_xref="H-InvDB:HIT000051556"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:25996 IMAGE:4816105"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2777
/gene="LRRC56"
/gene_synonym="DKFZp761L1518"
/gene_synonym="FLJ00101"
/db_xref="GeneID:115399"
/db_xref="HGNC:HGNC:25430"
CDS 492..2120
/gene="LRRC56"
/gene_synonym="DKFZp761L1518"
/gene_synonym="FLJ00101"
/codon_start=1
/product="leucine rich repeat containing 56"
/protein_id="AAH35937.1"
/db_xref="GeneID:115399"
/db_xref="HGNC:HGNC:25430"
/translation="MDLGWDRSRGPRRSTSSVRVRELSWQGLHNPCPQSKGPGSQRDR
LGEQLVEEYLSPARLQALARVDDLRLVRTLEMCVDTREGSLGNFGVHLPNLDQLKLNG
SHLGSLRDLGTSLGHLQVLWLARCGLADLDGIASLPALKELYASYNNISDLSPLCLLE
QLEVLDLEGNSVEDLGQVRYLQLCPRLAMLTLEGNLVCLQPAPGPTNKVPRGYNYRAE
VRKLIPQLQVLDEVPAAHTGPPAPPRLSQDWLAVKEAIKKGNGLPPLDCPRGAPIRRL
DPELSLPETQSRASRPWPFSLLVRGGPLPEGLLSEDLAPEDNTSSLTHGAGQVLCGNP
TKGLRERRHQCQAREPPEQLPQHRPGDPAASTSTPEPDPADSSDFLALAGLRAWREHG
VRPLPYRHPESQQEGAVAPWGPRRVPEEQVHQAEPKTPSSPPSLASEPSGTSSQHLVP
SPPKHPRPRDSGSSSPRWSTDLQSRGRRLRVLGSWGPGLGDGVAAVPVLRALEVASRL
SPRAQGCPGPKPAPDAAARPPRAAELSHPSPVPT"
BASE COUNT 526 a 906 c 896 g 449 t
ORIGIN
1 tgggagtagg agacagcgcc tggaggtgga gggcgcccag ggccgagctg ccagggccgg
61 acacctaggc tgagccctca gccggccaac tcgcctggca caggggcagc tctagacggg
121 atggagagga tgcatcttca gtgtccacac gtggtcaaca gataaaagcc atggccagaa
181 cgttctaagt ggctacatgt gcatctgcct gttcacggat tccttcgaca aatatttgag
241 catcccctcc tgcgactgtg gacagcagag gagcacgcag gccacgtgca gcccacagct
301 ctggggcgag gcaggccctc aaccgaacac gtatagagac agggtttcac agtgttagcc
361 aggatggtct caatctcctg acctcgtgat ctgcccgcct cagcctccca aagtgctggg
421 attacaggcg tgagccactg cgccccgcca gacgtctgca tctttaaggg gcaacaccag
481 gtgacatgtg aatggatctg ggctgggaca gatcacgtgg gcctcggcgg agcacctcca
541 gcgtccgggt gcgggagctg agctggcaag gcctgcacaa cccctgccca cagagcaagg
601 gccctggcag tcagagggac agacttggag agcagctggt ggaagagtac ctgtcccctg
661 cccggctgca ggccctggcc cgggtggatg accttcggct ggtgaggacg ctggagatgt
721 gtgtggacac tcgtgagggc agcctgggga actttggggt gcacctgccc aacctggacc
781 aactgaagct gaacggcagc cacctgggct ccctgaggga cttgggcacg tctctgggcc
841 acctgcaggt gctgtggctg gctcgctgtg gcctcgctga cctggatggc atcgcctctt
901 tgccagcact taaggaactc tacgcctcct acaacaacat ctcggacctg agcccactgt
961 gcctgctgga acaattggag gtgctggacc tggagggcaa cagcgtggag gacctggggc
1021 aggtgcgcta cttgcagctg tgcccacgcc tggccatgct caccctggag ggcaacctgg
1081 tgtgcctaca gccggcccct ggccccacca acaaggtgcc caggggctac aactacaggg
1141 cagaggtgag gaagctcatt ccccagctgc aggtcctgga cgaagtgccg gccgcacaca
1201 caggcccacc ggcccccccg cggctgagcc aggactggct tgcggtgaag gaggccatca
1261 agaagggcaa cggccttccc ccgctggact gtccccgtgg agcccccatc cggagacttg
1321 accccgagct gtccctgcct gagacgcagt cccgggcctc caggccctgg cccttctccc
1381 tgctggtccg tgggggcccc ctgcctgaag gcctgctttc tgaggacctg gccccagaag
1441 ataacaccag cagcctcacc catggtgctg gccaagtcct ctgtgggaac cccaccaagg
1501 gcctgcggga gcgtaggcac cagtgccagg ccagggagcc cccagagcag ctgccccaac
1561 acaggccagg agatccggcc gccagcactt ccaccccaga gcctgaccct gcagacagct
1621 ctgacttcct ggccttggct gggctcaggg cctggaggga acatggcgtg cgccccctcc
1681 cctataggca cccggagtcc caacaggaag gggctgtagc cccctggggc ccacggaggg
1741 tccctgaaga gcaagtgcac caggcagagc ccaagactcc ctccagcccc ccaagcctgg
1801 cctcagagcc ctccgggacc tcgagccagc acctggtccc ttcacctccc aagcacccaa
1861 ggccacgaga ttctggcagc agctccccgc ggtggtcgac agacctgcag tccagggggc
1921 gtcggctccg agtcctgggc agctgggggc ctggcctggg tgatggggtg gctgcagtgc
1981 ctgtcctgag agccctggag gtggcctcac gcctgagccc tcgagcccag ggatgtcctg
2041 gcccaaagcc agcaccagat gcagcagcta gacctcccag ggcagctgaa ctctctcacc
2101 ccagccccgt ccccacttaa tatagccccc actgccaggc ttccctgtgc tggggccacg
2161 acttgcccac atatgtggtc acagagcaca gaataccagg gcgggtgtgt tggggggtgg
2221 aaggagtgcc tggccctggg gaggaccctc ttggtggagg ggagtggggg actgggacca
2281 gccagggagg cagcagaggc tggaacccag tttaggcccc caactgggtt tggcctgggg
2341 agggagggtc cggctcccca gcccttcctt agggccaggc tttcccgcgg gcacgggggt
2401 ggggggtggt cacccgagca ggcctgtgag aggcctctcc tgctagaatt gggcatggcc
2461 gaggggcagg ggctggagct gcgagtccac cactcccttg ccggccccag ggtaagagcc
2521 acctcctagg ccgcagtggc ccaaggtccc agctgctcgc ctgaggccgc cgggggtgcg
2581 gtccaggcct cccgtctccg ggggatctgt agggttcccg cactgcgata gggcggcccg
2641 ttccctcctc ttggcgcagg acgccccgga acccaaacca acatttccag ctctcaggtg
2701 tacagaaatg cggtttactt tgtaggccac gttggttcaa taaatgatgc agcggacaaa
2761 taaaaaaaaa aaaaaaa
//