LOCUS BC035816 2106 bp mRNA linear HUM 29-OCT-2004
DEFINITION Homo sapiens suppressor of Ty 3 homolog (S. cerevisiae), mRNA (cDNA
clone IMAGE:5768301), partial cds.
ACCESSION BC035816
VERSION BC035816.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2106)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2106)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: p Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507308.
FEATURES Location/Qualifiers
source 1..2106
/db_xref="H-InvDB:HIT000094102"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5768301"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2106
/gene="SUPT3H"
/gene_synonym="SPT3"
/gene_synonym="SPT3L"
/db_xref="GeneID:8464"
/db_xref="MIM:602947"
CDS <1..1115
/gene="SUPT3H"
/gene_synonym="SPT3"
/gene_synonym="SPT3L"
/codon_start=3
/product="SUPT3H protein"
/protein_id="AAH35816.1"
/db_xref="GeneID:8464"
/db_xref="MIM:602947"
/translation="ESPFPFLHSTLSVPHPAPFQACPGPQQQKPHHLHPHILLAGSAA
VPPRVLKAEMNNTAASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAV
LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYK
SKIVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQE
RMERAERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAY
LAYETVAQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAI
QPCHIREAIRRYSHRIGPLSPFTNAYRRNGMAFLAC"
BASE COUNT 621 a 494 c 411 g 580 t
ORIGIN
1 ccgagtcacc ttttcccttt ctacactcca cactctcagt cccccacccc gcccctttcc
61 aagcgtgtcc cgggccgcag cagcagaaac cgcaccatct ccacccccac attctcctcg
121 cgggaagcgc agcagtgcct ccaagggttc ttaaagcaga gatgaataat acggcagcta
181 gtccaatgtc tactgcaact tcaagtagtg gaaggagtac agggaagtct ataagctttg
241 caacagaatt acagagtatg atgtattctt taggtgatgc tagaaggcct cttcatgaaa
301 cagcagtttt ggtagaagat gtggtacaca ctcagttaat taatctgtta cagcaagctg
361 ctgaagtttc tcagctgcgg ggagcaaggg taatcactcc tgaagatctt ctgtttttga
421 tgcgcaaaga taagaaaaaa cttagaagac tgctaaaata catgtttatt cgagactaca
481 aatcaaagat tgtcaaaggc atcgatgagg atgatcttct cgaagacaaa ttgagtggca
541 gcaataatgc gaacaaaaga caaaagattg ctcaggactt cctcaactct attgaccaga
601 caggagaact tttagcaatg tttgaagatg acgaaattga tgaagttaaa caagaaagaa
661 tggagagagc agaaagacaa actcgaatta tggattcagc tcaatatgca gaattctgtg
721 aaagtcgaca attaagtttc tccaaaaaag cttccaaatt tcgagactgg ttggactgca
781 gcagtatgga gataaaaccc aatgttgtcg caatggaaat cttagcatat ttagcgtatg
841 aaactgtggc acagttagtg gatctggctc ttcttgtgag gcaagacatg gtaaccaagg
901 caggggaccc cttcagccat gccatttctg caaccttcat tcagtatcac aactctgctg
961 agagcactgc agcctgtggt gttgaggctc acagcgatgc catccagccc tgccacatca
1021 gagaggccat tcgacgctac agccacagga ttggcccact ttccccattc acaaatgcct
1081 accgcaggaa tgggatggct tttctagcct gctgatgtga caactgtgat gtgcctgcaa
1141 caacaggaaa ggcaatgtta tattaaggtg atttcttgtg aacaaaataa aatacaaatt
1201 tacctttctt ttatctgagg gagtgggctg gtctgttgtg actttcaact tgctgactcc
1261 tcctcttttc cagcccctca accatcggtc ttgtttacta gatgggctgt tcagctaatt
1321 aatggcagga tgtttaggat agtctgtagg tggacaagaa tgcagatcac acagttttga
1381 aattttaatt tgagtagatt tactgccctc agctcacata ccttaaaagc agtggttgcc
1441 cccgtccagc gttttgtctg cattttattt gatatatttt ataatccagg tttggaacaa
1501 ggaaacaaaa ttaaaaggac agtgagtttt cgccttccct tacaccacca actttacttt
1561 ccaacatttg ttgacatgta ttttagtgac agctatccat tttataaact tacagtaatc
1621 aaagatctaa cagacctgat aaatcacctg ttcccacctc ctttcccctt cactccactt
1681 atagtatgtg tcattttcaa tgcctgcttc ccaacttcct gccatctgcc tttcatgtgt
1741 gtttttcctc acacagaacc tcttcctcca tcttcatttc cctccttttc ctgttcctcc
1801 aatccccaga tccaccactc ctgcacatgc catacacatt tagaagccaa gtattcagaa
1861 tcagtagaag gggagcagag tgatttcttg cttcctccct tcaaagcact accacaccta
1921 gactggaaat gtgggctggg taatttcttg ctgttagcag ccgagctacc cttctggcat
1981 ctatactttc tccagtaaat gaggaaccgt aactctttgg aacaaaccaa aatatagcag
2041 atgtaattgt acagttcctg attaaacttc aattgcaaaa aaaaaaaaaa aaaaaaaaaa
2101 aaaaaa
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