LOCUS BC035775 1862 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens hect domain and RLD 6, mRNA (cDNA clone
IMAGE:5590509), partial cds.
ACCESSION BC035775
VERSION BC035775.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1862)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1862)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: f Column: 1.
FEATURES Location/Qualifiers
source 1..1862
/db_xref="H-InvDB:HIT000094078"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5590509"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1862
/gene="HERC6"
/db_xref="GeneID:55008"
/db_xref="HGNC:HGNC:26072"
/db_xref="MIM:609249"
CDS <1..1192
/gene="HERC6"
/codon_start=2
/product="HERC6 protein"
/protein_id="AAH35775.2"
/db_xref="GeneID:55008"
/db_xref="HGNC:HGNC:26072"
/db_xref="MIM:609249"
/translation="FNSLSKIKLLQADSHIKMQMSEKKAYMLMHETILQKKDEFPPSP
RFILRVRRSRLVKDALRQLSQAEATDFCKVLVVEFINEICPESGGVSSEFFHCMFEEM
TKPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKK
LLDQKPSLEDLKELSPRLGKSLQEVLDDAADDIGDALCIRFSIHWDQNDVDLIPNGIS
IPVDQTNKRDYVSKYIDYIFNVSVKAVYEEFQRGFYRVCEKEILRHFYPEELMTAIIG
NTDYDWKQFEQNSKYEQGYQKSHPTIQLFWKAFHKLTLDEKKKFLFFLTGRDRLHARG
IQKMEIVFRCPETFSERDHPTSITCHNILSLPKYSTMERMEEALQVAINNNRGFVSPM
LTQS"
BASE COUNT 593 a 380 c 377 g 512 t
ORIGIN
1 ctttaattcg ctatccaaaa ttaaattatt gcaagctgat tcacatataa agatgcagat
61 gtcagaaaag aaagcataca tgcttatgca tgaaacaatt ctgcaaaaaa aggatgaatt
121 tcctccatca cccagattta tacttagagt cagacgaagt cgcctggtta aagatgctct
181 gcgtcaatta agtcaagctg aagctactga cttctgcaaa gtattagtgg ttgaatttat
241 taatgaaatt tgtcctgagt ctggaggggt tagttcagag ttcttccact gtatgtttga
301 agagatgacc aagccagaat atggaatgtt catgtatcct gaaatgggtt cctgcatgtg
361 gtttcctgcc aagcctaaac ctgagaagaa aagatatttc ctctttggaa tgctgtgtgg
421 actctcctta ttcaatttaa atgttgctaa ccttcctttc ccactggctc tgtataaaaa
481 acttctggac caaaagccat cattggaaga tttaaaagaa ctcagtcctc ggttggggaa
541 gagtttgcaa gaagttctag atgatgctgc tgatgacatt ggagatgcgc tctgcatacg
601 cttttctata cactgggacc aaaatgatgt tgacttaatt ccaaatggga tctccatacc
661 tgtggaccaa accaacaaga gagactatgt ttctaagtat attgattaca ttttcaacgt
721 ctctgtaaaa gcagtttatg aggaatttca gagaggattt tatagagtct gtgagaagga
781 gatacttaga catttctacc ctgaagaact aatgacagca atcattggaa atactgatta
841 tgactggaaa cagtttgaac agaattcaaa gtatgagcaa ggataccaaa aatcacatcc
901 tactatacag ttgttttgga aggctttcca caaactaacc ttggatgaaa agaaaaaatt
961 cctctttttc cttacaggac gtgataggct gcatgcaaga ggcatacaga aaatggaaat
1021 agtatttcgc tgtcctgaaa ctttcagtga aagagatcac ccaacatcaa taacttgtca
1081 taatattctc tccctcccta agtattctac aatggaaaga atggaggaag cacttcaagt
1141 agccatcaac aacaacagag gatttgtctc acccatgctc acacagtcat aatcacctct
1201 gagagactca gggtgggctt tctcacactt ggatccttct gttcttcctt acacctaaat
1261 aatacaagag attaatgaat agtggttaga agtagttgag ggagagattg ggggaatggg
1321 gagatgatga tgatggtcaa agggtgcaaa atctcacaca agactgaggc aggagaatag
1381 ggtacagaga tagggatcta aggatgactt ggacacactc cctggcactg aagagtctga
1441 acactggcct gtgattggtc cattccagga ccttcatttg cataaggtat caaaccacat
1501 cagcctctga ttggccatgg gccagacctg cactctggcc aatgattggt tcattccagg
1561 acattcattt gcataaggag tcaaaccaca ccagtcttgg attggctgtg agccaattca
1621 cctcagtctc taattggctg tgagtcagtc tttcatttac atagggtgta accatcaaga
1681 aacctctaca gggtacttaa gccccagaag attttgctac cagggctctt gagccacttg
1741 ctctagccca ctcccaccct gtggaatgta ctttcacttt tgctgcttca ctgccttgtg
1801 ctccaataaa tccactcctt caccacccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aa
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