LOCUS BC035727 1467 bp mRNA linear HUM 22-DEC-2006
DEFINITION Homo sapiens Lix1 homolog (mouse)-like, mRNA (cDNA clone MGC:46719
IMAGE:5723677), complete cds.
ACCESSION BC035727
VERSION BC035727.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1467)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1467)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: g Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308457.
FEATURES Location/Qualifiers
source 1..1467
/db_xref="H-InvDB:HIT000051490"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46719 IMAGE:5723677"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1467
/gene="LIX1L"
/gene_synonym="MGC46719"
/db_xref="GeneID:128077"
/db_xref="HGNC:HGNC:28715"
CDS 75..1088
/gene="LIX1L"
/gene_synonym="MGC46719"
/codon_start=1
/product="Lix1 homolog (mouse)-like"
/protein_id="AAH35727.1"
/db_xref="GeneID:128077"
/db_xref="HGNC:HGNC:28715"
/translation="METMRAQRLQPGVGTSGRGTLRALRPGVTGAAAATATPPAGPPP
APPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAVVRSFAKHTQGYGRVNVVE
ALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTKAEA
RRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRFM
LESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQM
ALDWVSREQSVPGALSRELASTERELDEARLAGKELRFHKEKKDILVLAAGQLGNMHS
SNC"
BASE COUNT 366 a 369 c 391 g 341 t
ORIGIN
1 gctgactggg gtggttggga ccgttagctc ggcaggctgg caggctccgg ggcgctactc
61 cattggcggc cgggatggag actatgcgag cgcagcggct gcagcctggt gtgggcacca
121 gcgggagggg cactctccga gcgctgcggc ccggagtgac tggggccgcg gctgccaccg
181 ccacaccccc tgcgggcccc ccgcctgccc cgccgcctcc cgcaccgccc ccgccgccgc
241 tgctcctgtc tggggcccca ggactacccc tgccccccgg cgccgccggc agcccggcag
301 tgctgcgaga ggccgtggag gccgtggtga ggagcttcgc caagcacacg cagggctatg
361 gccgagtgaa tgtggtggag gcacttcagg aattctggca gatgaagcag tcccgtggtg
421 ctgacttaaa gaatggggct ctagtggttt atgagatggt tccctccaac agccctcctt
481 atgtctgcta tgtcaccctg cctgggggaa gctgctttgg gagtttccag ttttgcccca
541 caaaagctga ggcccggagg agtgctgcaa agattgcgct aatgaattct gtgtttaatg
601 aacatccttc ccgaagaatc actgatgagt tcatcgagaa gagtgtctct gaggccctgg
661 catcttttaa tggcaacagg gaggaagctg acaacccaaa tacagggatt ggtgccttcc
721 gattcatgct ggaatccaac aagggcaaat caatgttgga gttccaggag ctaatgacag
781 tttttcaact gctacactgg aatggcagcc ttaaggccat gagggaacga caatgctctc
841 ggcaggaggt gttggctcat tattcgcacc gggccctgga tgatgatatt cgccaccaaa
901 tggccttgga ctgggtgagc cgggagcaga gtgtgccggg ggcactgtct agagagctgg
961 cctctactga gcgggagctg gatgaagccc gactggcagg caaggagctg cgcttccaca
1021 aggagaagaa agatattctt gtgctggctg ctgggcagtt gggcaatatg cattcttcca
1081 actgctaggc atccacccac ataactcccc aggctttcca cagccttttt ttatgtctcc
1141 tttctaagat ttaggatgat tttttgtaca tactttctca tttttatact ttaaaaaata
1201 tatatgtgta taaattctac acctagattc ctatttgcta agagatccct tttcttacta
1261 ccagtttttg gatgtagttt tatttgaaac atcttcagtc cactttacaa caaagagcag
1321 cttgtctttg cagctttgtt agctcttaaa cttccagatt aactgtgtag ccatttcagt
1381 agcactaaaa gattaactct aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//