LOCUS BC035708 3690 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens tetratricopeptide repeat domain 7A, mRNA (cDNA clone
IMAGE:5577216), with apparent retained intron.
ACCESSION BC035708
VERSION BC035708.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3690)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3690)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: c Column: 20
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3690
/db_xref="H-InvDB:HIT000094037"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5577216"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 794 a 1051 c 1044 g 801 t
ORIGIN
1 ccacgcgtcc gcctctgcct cagaactttg agacaatggc tctctctctg tttcccttcc
61 cagaccacaa ataacagcac gtcgaggcat ctgaaaggct gtcacccgct tgactatgag
121 ctcacctact tcctggaagc tgccctccag agcgcctatg tgaaaaacct gaagaagggg
181 aacatcgtga agggcatgag agagctccgg gaagtgctgc ggactgtgga gaccaaagca
241 actcagaact tcaaagtgat ggcggccaag cacctggcgg gggtcctgct gcactccctg
301 agtgaggagt gctactggag ccccctgtcc caccctctgc ctgagttcat gggcaaggag
361 gagagttctt tcgccactca ggccctgcgg aaacctcacc tctatgaagg agacaacctc
421 tactgcccca aggacaacat cgaggaagcc ctcctgctcc tcctcatcag cgaatccatg
481 gcaactcgag atgtggtgct gagccgggtg ccggagcagg aggaggaccg gacagtgagc
541 ttgcagaatg ccgcagccat ctatgacctc ctgagcatca cgttgggcag aaggggacag
601 tacgtcatgc tctcggagtg cctggagcga gccatgaagt ttgcgtttgg agaatttcac
661 ctttggtacc aggtggccct ctccatggtg gcttgtggga agtcagccta cgctgtgtcc
721 ctgctgcggg agtgtgtgaa gttgcggccc tcggacccca ccgtgcccct gatggccgcg
781 aaggtctgca tcgggtccct tcgctggcta gaggaagcag agcactttgc catgatggtg
841 atcagcctcg gagaggaagc cggggagttc ctccccaagg gctacctggc tctgggtctc
901 acctatagcc tgcaggccac cgacgccacc ctgaagtcca agcaagatga attgcaccgg
961 aaggcactgc agacgctgga gagggctcag cagctggcgc ccagtgaccc ccaggtcatc
1021 ctctatgtct cgctgcagct ggccctcgtc cgacagatct ccagtgccat ggagcagctg
1081 caggaggccc tgaaggtacg caaggatgat gcccacgccc tccacctgct ggcactgctc
1141 ttctctgccc agaagcacca ccagcatgcc ctggatgttg tcaacatggc catcaccgag
1201 caccctgaga acttcaacct gatgttcacc aaggtgaagc tggagcaggt gctgaaaggc
1261 ccagaggaag ccctcgtgac ctgcagacaa gtgctgaggc tgtggcagac cctgtacagc
1321 ttctcccagc tgggaggcct agaaaaggat ggcagcttcg gtgagggcct caccatgaag
1381 aagcagagtg gcatgcacct gactttgcct gatgcccatg atgcagactc tggctcccgg
1441 cgggcttcgt ccatcgccgc ctcccggctg gaggaggcca tgtcagagct gactatgccc
1501 tcttcggtcc tgaagcaggg ccccatgcag ctgtggacca cactggaaca gatctggctg
1561 caggctgctg agctgttcat ggagcagcag cacctcaagg aagcaggttt ctgcatccag
1621 gaggcggcgg gcctcttccc cacttctcac tcagtactct atatgcgggg ccggctggct
1681 gaggtgaagg gcaacctgga ggaggccaag cagctgtaca aggaggcgct cacggtgaac
1741 ccagatggcg tgcgcatcat gcatagcctg ggtctgatgc tgagtcggct gggccacaag
1801 agcttggccc agaaggtgct tcgtgatgcc gtggagaggc agagtacgtg ccacgaggcg
1861 tggcagggcc tgggcgaggt gctgcaggcc cagggccaga acgaggctgc cgttgactgc
1921 ttcctcaccg cccttgagct ggaggccagc agccctgtac tgcccttctc catcatcccc
1981 agagagctct gacgacgctg cagccgcagg gagggagggg ctggccagag ggagaggcag
2041 cagggaacgt gggtcagggt ggggcaacag tggcatcagg tgcggggcct cagggaaata
2101 catctttagt gaacgcctct gcagctgcag ccctcgttct cttggctggg ccaagagggc
2161 cttcctggat ttctttgttg gtgccttggg aaacagtctg acttgaaccc taagtgcctt
2221 tggagagttt tgtggtgacc agacttgctc cccaagagct gggcagcggg gagcctcaca
2281 gctgtccttc accctcaccc atgcctctgg cttggggtct gggtgggggg ttctcactcc
2341 ccactctcag cacagtacag acttctggat ctctctcagg tcttgcccag ggcggtcaca
2401 atgtgaagaa actgcgggca agtgggaaga ctatgagatt tctgggttcc cttctcagac
2461 ttggagttag tagatgattc ctgcattgcc cctgcttgcc ctctgagacc agctgggccc
2521 caccttgctc tttccccctg ctaccaagtg cctttggggc ctctggggtc tgaccagggg
2581 tactgagcac cggccctaac acttccatct ccacccaccc catctccctg gcgatgtgct
2641 ccagcccaag cagcctccgt aggctttaga tcctgtggtt gccagatcca gtcctttcta
2701 ataccctgag tcaacacatt actcctgcag gtcttaggct acaatgcagg tcccttgagg
2761 gccaccaaca tggaggtagg cagtttctag gactgtcccc agtacatctc accacccaca
2821 gccctttttt tgccttgatt cgagcctcac cctggccttt tggcttcccc tgcctgagag
2881 agacctgagg aggggacaga gcccagcccc tctcctgtgg ctgagcaggc ctctgtgtcc
2941 atgacacctg tcttccgggc ctgggggctg tgggtgtatg tcctccctac tggcttcccc
3001 ggcccctgct gcatgatgct cttggaactc ttccccaagg agtcagtccc ccaggcctat
3061 caggggatcc ttttgtatct gcactttggg ttttagtttc aaagctccat caggtacagc
3121 ttgcatttca ggatgtgtgg aaagctcggg tgagggctgc cctggttcat catagctcca
3181 ccttcctcgg aaggagtggg ctgttggaga ccccccatcc atggcacact agctcagcac
3241 tgcatttccc gagatgattc ccaagacagc tggtgcctcc tggctttcct gtgccaggcc
3301 aaggggcacc acagaggacc ctggatcctt tgcctcttct tggttgaagg atctctatgt
3361 atgtgtgtat ataaatatag ttttttatct atatatataa aatagagatc tatttttttt
3421 ctggaattct gttagaaaag taaagaaaaa gcaaatgctg ttggtttatc tcagggtgcc
3481 caaagtggtt atagtcaatt tttggtacta ggaaaggcac ccaatgcatt tcctgacttt
3541 taagcatttc cttgttggaa gcagcagagg gccaggccaa gttgctgaca gtgactttgc
3601 aggttgaata aagaaaccct tggaggggaa gcaggaaaaa aaaaaaaaaa aaaaaaaaaa
3661 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//