LOCUS BC035699 1656 bp mRNA linear HTC 10-MAY-2004
DEFINITION Homo sapiens protein tyrosine phosphatase domain containing 1, mRNA
(cDNA clone IMAGE:5547531), with apparent retained intron.
ACCESSION BC035699
VERSION BC035699.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1656)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1656)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: a Column: 8
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1656
/db_xref="H-InvDB:HIT000094030"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5547531"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 482 a 387 c 398 g 389 t
ORIGIN
1 ccacgcgtcc gcaggtgttt taatagcctg ttacttagtt tttgcaacga gaatgactgc
61 tgaccaagca attatatttg tgcgggcaaa gcgacccaat tccatacaaa ccagaggaca
121 gctcctctgt gtaagggaat ttactcagtt tctaactcct ctccgcaata tattctcttg
181 ctgtgatccc aaagcacatg ctgtcacctt acctcaatat ctaattcgcc agcgtcatct
241 gcttcatggt tatgaggcac gacttctgaa acacgtgcca aaaattatcc acctagtttg
301 caaattgctg ctggacttag cggagaacag gccagtgatg atgaaggatg tgtccgaagg
361 acctggtctc tctgctgaaa tagaaaagac aatgtctgag atggtcacca tgcagctgga
421 taaagagtta ctgaggcatg acagtgattt ttccaacccg cctaacccca ctgcagtggc
481 agcagatttt gacaatcgag gcatgatttt ctccaatgag caacagtttg accctctttg
541 gaaaaggcgg aatgttgagt gccttcaacc cctgactcat ctgaaaaggc ggctcagcta
601 cagtgactca gatttaaaga gggccgagaa cctcctggag caaggggaga ctccacagac
661 agtgcctgcc cagatcttgg ttggccacaa gcccaggcag cagaagctca taagccattg
721 ttacatccca cagtctccag aaccagactt acacaaggaa gccttggttc gcagcacact
781 ttctttctgg agtcagtcaa agtttggagg cctggaagga ctcaaagata atgggtcacc
841 aattttccat ggaaggatca ttccaaagga agcacagcag agtggagctt tctctgcaga
901 tgtttcaggc tcacacagcc ctggggagcc agtttcaccc agctttgcaa atgtccataa
961 ggatccaaac cctgctcacc agcaagtgtc tcactgtcag tgtaaaactc atggtgttgg
1021 gagccctggc tctgtcaggc agaacagcag gacaccccga agccctctgg actgtggctc
1081 cagtcccaaa gcacagttct tggttgaaca tgaaacccag gacagtaaag atctgtctga
1141 agcagcttca cactctgcat tacagtctga attgagtgct gaggcaagaa gaatactggc
1201 ggccaaagcc ctagcaaatt taaatgaatc tgtagaaaag gaggaactaa aaaggaaggt
1261 agaaatgtgg cagaaagagc ttaattcccg agatggagct tgggaaagaa tatgtggcga
1321 gagggaccct ttcatcctat gcagcttgat gtggtcttgg gtggagcaac tgaaggagcc
1381 tgtaatcacc aaagaggatg tggacatgtt ggttgacagg cgagcagatg ccgcagaagc
1441 acttttttta ttagagaagg gacagcacca gactattctc tgcgtgttgc actgcatagt
1501 gaacctgcag acaattcccg tggatgtgga ggaagctttc cttgcccatg ccattaaggc
1561 attcactaag gttaattttg attctgaaaa tggaccaaca gtttacaaca ccctgaagaa
1621 aatatttaag cacacgctgg aaaaaaaaaa aaaaaa
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