LOCUS BC035590 4656 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CCR4-NOT transcription complex, subunit 4, mRNA (cDNA
clone MGC:45148 IMAGE:5576434), complete cds.
ACCESSION BC035590
VERSION BC035590.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4656)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4656)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: n Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56550056.
FEATURES Location/Qualifiers
source 1..4656
/db_xref="H-InvDB:HIT000051429"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45148 IMAGE:5576434"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4656
/gene="CNOT4"
/gene_synonym="CLONE243"
/gene_synonym="NOT4H"
/db_xref="GeneID:4850"
/db_xref="HGNC:HGNC:7880"
/db_xref="MIM:604911"
CDS 292..2010
/gene="CNOT4"
/gene_synonym="CLONE243"
/gene_synonym="NOT4H"
/codon_start=1
/product="CCR4-NOT transcription complex, subunit 4"
/protein_id="AAH35590.1"
/db_xref="GeneID:4850"
/db_xref="HGNC:HGNC:7880"
/db_xref="MIM:604911"
/translation="MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHR
IRTDENGLCPACRKPYPEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLAS
VRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAY
VTYIRSEDALRAIQCVNNVVVDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGD
EAASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKP
SDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLF
SDIFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGS
SKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGF
LHPAAATNANSLNSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMAFPRNSIMHL
NHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGEEEVKVSTMPLSTSSHSLQQGQQPTS
LHTTVA"
BASE COUNT 1453 a 937 c 874 g 1392 t
ORIGIN
1 ccacgcgtcc gggtggcccg tctggctgtg gaacccaccg aaagctgaga gtctctctct
61 cagccgtaaa ggtcggactc gctgaagcaa tcaggcccgg ttctgaagag ttttttcccc
121 gacgctcgtt cggtggtttc ttgtgaggac gcggcagccc gtggagtcgg ctgagggaaa
181 agcgaggcaa ggcaggcggg tcgtcaaagt cctacatttt agctttcagt gctgaacttc
241 cttctccctt aaattattat aaacttttgc tgctgtttaa taaacgtgaa gatgtctcgc
301 agtcctgatg cgaaggaaga ccctgtggag tgccctcttt gcatggagcc cttggagata
361 gatgatatca actttttccc ttgcacctgt ggctaccaga tttgccgatt ttgttggcat
421 cgaattcgca ctgatgaaaa tgggctttgt cctgcatgta gaaagccata tccagaagac
481 ccagcagttt ataaaccact ctcccaggaa gagctgcaaa ggataaagaa tgagaaaaaa
541 cagaaacaaa atgagagaaa acagaaaata tcagaaaatc gcaaacattt ggctagtgta
601 cgtgtcgtac aaaaaaacct cgtctttgtt gtaggtttat ctcagcgcct agcagaccca
661 gaggttttaa aacgaccaga atattttggg aagtttggta aaatacataa agttgtcatc
721 aataatagca catcatatgc aggctcacag ggtccaagtg ccagtgctta tgtaacctat
781 atccggtcag aagacgctct cagagccata cagtgtgtca acaatgtggt agtagatggc
841 agaacactta aggcatctct aggtacaaca aaatactgca gttacttctt aaagaatatg
901 cagtgtccaa aacctgactg catgtatctt catgaattgg gggatgaggc ggccagcttc
961 acaaaagagg aaatgcaggc gggtaaacac caagaatatg aacagaagct acttcaagaa
1021 ttatataaat taaatcccaa ttttcttcag ctatctacgg gttcagttga taaaaataag
1081 aacaaagtga caccactgca gagccccatt gacaaacctt cagattctct cagtataggg
1141 aacggtgata attcccagca gatatctaac agtgatacgc cttcaccacc acctggtttg
1201 tcaaaatcca atccagtcat ccccatcagt tcatccaatc acagtgcacg gtcccctttt
1261 gaaggggcag taacagagtc acagtcgtta ttctcagaca tttttcgcca tcccaaccct
1321 atcccaagtg ggcttcctcc tttccccagc tccccacaga catccagtga ctggcctaca
1381 gcaccagaac cacagagcct cttcacatca gaaacaatcc cagtatcatc ctctacagac
1441 tggcaagcag cttttggctt tggttcttct aaacaaccag aggatgactt gggttttgat
1501 cccttcgatg tcactcgaaa agccttagca gacctgattg agaaggaact gtccgttcaa
1561 gaccaacctt ccctttcgcc cacatctctt cagaactcct cttcacacac tacaaccgcc
1621 aaaggtccag gctctggatt cctgcatcct gctgcagcta caaatgccaa ttctctcaat
1681 agtacctttt cagtcttgcc ccagaggttc cctcaatttc agcagcaccg agcggtttat
1741 aattcattca gttttccagg ccaggcagcc cgctatcctt ggatggcctt tccacgcaat
1801 agcatcatgc acttgaacca cacagcaaac cccacctcaa atagtaattt cttggacttg
1861 aatctcccgc cacagcacaa cacaggtctg ggagggatcc ctgtagcagg ggaagaagag
1921 gtgaaggttt cgaccatgcc actgtcaacc tcttcccatt cattacaaca aggacagcag
1981 cctacaagtc tccacactac tgtggcctga caacagaact gagaggagag gattagactc
2041 tggggtgctt gcatgggcaa ctggattttt gcatgattcc tttatgattt tgcttttaat
2101 gtatacaccc agaagagcca atataaacgt tcctcatgcc tacagctagc gtgttacctc
2161 atagttgttg aagtatttct tcattaggcc tttaacataa tttattagtg taataatttt
2221 ggcattgttt ctcatgagtg atactatttc taactcataa aaataaactt gtagtactaa
2281 gatcccaggt gagattagct agaattgttg ttattttggc tctattattg aaaaattata
2341 caaaggtaat ggtagtatct tgttttctgg tttgtgaaaa aataatatcc taatctcctg
2401 aaaaatttgc aaattaacaa gataatgtct attgcattct ttgaatactt gagaagaaag
2461 aatacatata aaacaaaatt ggtggtgtca tttaatgctc agaaggatat tgttggcgat
2521 tgtttttagt tgtctagatt tatatcctat aatatgcatt acatgtgtag aaactgtttt
2581 gttctctctc ttttgcactt ttgcactttc tttttgaatg gttgttaatt atgcatagat
2641 ggttaaaaga taattattgt agcctaaatg caatataatc tcttttctaa tgcactgcct
2701 agtataccag gaaatgcctc aaaaacagaa cttcagttta tagttgactt atctgaaact
2761 tgaatacgga gtaaacattg tatgtgaaaa gcaaccatag tagtgtaaca ttgttactga
2821 acaaacagta attctgtggg atattgtttt ggaaatttca ttgtttaata attaaaatgt
2881 gataataaga taatattata agtacctgac cagaatgaga ctaaggcaga agagaagaga
2941 ttggatgtcc tctaaaatta ggccacctaa attgtaacag ataattttaa tcaagagaat
3001 agtggagtac tttattagga cataatgtga agtgatattt ctgaaaacac atttcttgaa
3061 atagttttaa aactgataat aaaggaaaag aaactgtact tagtttggag cagtggacaa
3121 aagctgattc agaaaacatg accatattct gcctacatga agcatctggg aagaaaggga
3181 aagtcacacc tcctcttgag attttaacca ttatgataaa aggtatgctt taatttgtta
3241 aaaaaaaaaa gtatgaaagg ggataatgtg aatacaaaaa agaagcctag agattgaaaa
3301 taataataat agaacatgtt attaggagat ggtacttaat gtcatgttgg agttggagtt
3361 ttcaaggtta cctctatata aaattggatt attttctgtt agatataatg tgacaaatta
3421 aatgacttta tcccaaggta cagtgaggta aacaaaaatc tattcttaga tatccttaga
3481 tttggttaac tgaggctgta gaagcagcga attgtctagc catttaagtt atttttgtaa
3541 aattcagcat aaacatcaat ctctaatttc tatctagaag tgactttaag acattacaag
3601 aacattgcca atttggaaaa ttccaataaa atactgtaga cttattaata ttgtagactt
3661 attatcagcc ttttactata gcttaattta attatggttt tcatttttac tgtaagaggc
3721 caagacttca cttatgtctc ctgtggagct gaggctcctg ggccttgtta ttataacaaa
3781 ctctggctcc ttgtaatgat gcttactagc tcaaagcctt ctccagcatt cagtgttagc
3841 ctttcattgc ctggatcttc ttacaaagcc atagcaagtg gttagtgcca tttgctcctt
3901 ggtgttgaga gatatacctg ttaaatgagg cttctttcct ttctcattca tagccagcgt
3961 ggaaaaatca tcaggtagtt tgcccagatt tgccagagcc ctaaataaaa tggcaaaacg
4021 atctccctgc ctgcttctcc tccccacccc cacttacatg cacaccgtaa atcaagaaat
4081 gctttttggg caattagact ttatcttcta aatttttgca tagaatggct aaacatgatc
4141 ttttgcctca ctttgtaatt cctacacctt ccttgtaagc ttcacctttt gcttacctaa
4201 tattttattt aaacatggtt ttttaaaaaa cctgaagctt taaaatcata gtcataatta
4261 attttacact aaaggacaga agaaattata caacacataa aagaagccac tacttcacat
4321 agcaagcaaa ttgaaatcaa aatgacagaa gaatgagaaa ttctttaaaa gcttcaggtt
4381 ttttttgttg ttgttgttaa attcctgcat gatgcatcat gtgcaaggga aacttaatat
4441 acttttacac ccttaacctt tataaagtga ctagcttttc ccttaacata ggaattttta
4501 acctggagcc cagatttttg agagtacaca caaaattgtg ggtttgtgtg catgtacata
4561 tgtccatttt tttctaggga gaagatccat agttattaga tttgtgaagg atttggtgat
4621 ccccttctcc catcaaaaaa aaaaaaaaaa aaaaaa
//