LOCUS BC035585 5009 bp mRNA linear HUM 24-DEC-2002
DEFINITION Homo sapiens, Similar to triple functional domain (PTPRF
interacting), clone IMAGE:5497679, mRNA, partial cds.
ACCESSION BC035585
VERSION BC035585.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5009)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: f Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6005921.
FEATURES Location/Qualifiers
source 1..5009
/db_xref="H-InvDB:HIT000093969"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5497679"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
CDS 127..>5009
/codon_start=1
/product="Similar to triple functional domain (PTPRF
interacting)"
/protein_id="AAH35585.1"
/translation="MKAMDVLPILKEKVAYLSGGRDKRGGPILTFPARSNHDRIRQED
LRRLISYLACIPSEEVCKRGFTVIVDMRGSKWDSIKPLLKILQESFPCCIHVALIIKP
DNFWQKQRTNFGSSKFEFETNMVSLEGLTKVVDPSQLTPEFDGCLEYNHEEWIEIRVA
FEDYISNATHMLSRLEELQDILAKKELPQDLEGARNMIEEHSQLKKKVIKAPIEDLDL
EGQKLLQRIQSSESFPKKNSGSGNADLQNLLPKVSTMLDRLHSTRQHLHQMWHVRKLK
LDQCFQLRLFEQDAEKMFDWITHNKGLFLNSYTEIGTSHPHAMELQTQHNHFAMNCMN
VYVNINRIMSVANRLVESGHYASQQIRQIASQLEQEWKAFAAALDERSTLLDMSSIFH
QKAEKYMSNVDSWCKACGEVDLPSELQDLEDAIHHHQGIYEHITLAYSEVSQDGKSLL
DKLQRPLTPGSSDSLTASANYSKAVHHVLDVIHEVLHHQRQLENIWQHRKVRLHQRLQ
LCVFQQDVQQVLDWIENHGEAFLSKHTGVGKSLHRARALQKRHEDFEEVAQNTYTNAD
KLLEAAEQLAQTGECDPEEIYQAAHQLEDRIQDFVRRVEQRKILLDMSVSFHTHVKEL
WTWLEELQKELLDDVYAESVEAVQDLIKRFGQQQQTTLQVTVNVIKEGEDLIQQLRDS
AISSNKTPHNSSINHIETVLQQLDEAQSQMEELFQERKIKLELFLQLRIFERDAIDII
SDLESWNDELSQQMNDFDTEDLTIAEQRLQHHADKALTMNNLTFDVIHQGQDLLQYVN
EVQASGVELLCDRDVDMATRVQDLLEFLHEKQQELDLAAEQHRKHLEQCVQLRHLQAE
VKQVLGWIRNGESMLNAGLITASSLQEAEQLQREHEQFQHAIEKTHQSALQVQQKAEA
MLQANHYDMDMIRDCAEKVASHWQQLMLKMEDRLKLVNASVAFYKTSEQVCSVLESLE
QEYKREEDWCGGADKLGPNSETDHVTPMISKHLEQKEAFLKACTLARRNADVFLKYLH
RNSVNMPGMVTHIKAPEQQVKNILNELFQRENRVLHYWTMRKRRLDQCQQYVVFERSA
KQALEWIHDNGEFYLSTHTSTGSSIQHTQELLKEHEEFQITAKQTKERVKLLIQLADG
FCEKGHAHAAEIKKCVTAVDKRYRDFSLRMEKYRTSLEKALGISSDSNKSSKSLQLDI
IPASIPGSEVKLRDAAHELNEEKRKSARRKEFIMAELIQTEKAYVRDLRECMDTYLWE
MTSGVEEIPPGIVNKELIIFGNMQEIYEFHNNIFLKELEKYEQLPEDVGHCFVTWADK
FQMYVTYCKNKPDSTQLILEHAGSYFDEIQQRHGLANSISSYLIKPVQRITKYQLLLK
ELLTCCEEGKGEIKDGLEVMLSVPKRANDAMHLSMLEGFDENIESQGELILQESFQVW
DPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVEGDPC
KFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQERTIHLKGALKEPIHIPKTA
PATRQKGRRDGEDLDSQGDGSSQPDTISIASRTSQNTLDSDKLSGGCELTVVIHDFTA
CNSNELTIRRGQTVEVL"
BASE COUNT 1408 a 1203 c 1360 g 1038 t
ORIGIN
1 ccacgcgtcc gggtctacac ttctgtgaaa cggggcagtc acggcactca ctgcccaggg
61 agtggggacg gtggccgagc tgaagctcgg aggaccggga ggcgcgggtt tcgaaaaaac
121 gatgaaatga aagctatgga tgttttacca attttgaagg aaaaagttgc atacctttca
181 ggtgggagag ataaacgtgg aggtcccatt ttaacgtttc cggcccgcag caatcatgac
241 agaatacgac aggaggatct caggagactc atttcctatc tagcctgtat tcccagcgag
301 gaggtctgca agcgtggctt cacggtgatc gtggacatgc gtgggtccaa gtgggactcc
361 atcaagcccc ttctgaagat cctgcaggag tccttcccct gctgcatcca tgtggccctg
421 atcatcaagc cagacaactt ctggcagaaa cagaggacta attttggcag ttctaaattt
481 gaatttgaga caaatatggt ctctttagaa ggccttacca aagtagttga tccttctcag
541 ctaactcctg agtttgatgg ctgcctggaa tacaaccacg aagaatggat tgaaatcaga
601 gttgcttttg aagactacat tagcaatgcc acccacatgc tgtctcggct ggaggaactt
661 caggacatcc tagctaagaa ggagctgcct caggatttag agggggctcg gaatatgatc
721 gaggaacatt ctcagctgaa gaagaaggtg attaaggccc ccatcgagga cctggatttg
781 gagggacaga agctgcttca gaggatacag agcagtgaaa gctttcccaa aaagaactca
841 ggctcaggca atgcggacct gcagaacctc ttgcccaagg tgtccaccat gctggaccgg
901 ctgcactcga cacggcagca tctacaccag atgtggcatg tgaggaagct gaagctggac
961 cagtgcttcc agctgaggct gtttgaacag gatgctgaga agatgtttga ctggatcaca
1021 cacaacaaag gcctgtttct aaacagctac acagagattg ggaccagcca ccctcatgcc
1081 atggagcttc agacgcagca caatcacttt gccatgaact gtatgaacgt gtatgtaaat
1141 ataaaccgca tcatgtcggt ggccaatcgt ctggtggagt ctggccacta tgcctcgcag
1201 cagatcaggc agatcgcgag tcagctggag caggagtgga aggcgtttgc ggcagccctg
1261 gatgagcgga gcaccttgct ggacatgtcc tccattttcc accagaaggc cgaaaagtat
1321 atgagcaacg tggattcatg gtgtaaagct tgcggtgagg tagaccttcc ctcagagctg
1381 caggacctag aagatgccat tcatcaccac cagggaatat atgaacatat cactcttgct
1441 tattctgagg tcagccaaga tgggaagtcg ctccttgaca agctccagcg gcccttgact
1501 cccggcagct ccgattccct gacagcctct gccaactact ccaaggccgt gcaccatgtc
1561 ctggatgtca tccacgaggt gctgcaccac cagcggcagc tggagaacat ctggcaacac
1621 cgcaaggtcc ggctgcatca gaggctgcag ctgtgtgttt tccagcagga cgttcagcag
1681 gtgctagact ggatcgagaa ccacggagaa gcatttctga gcaaacatac aggtgtgggg
1741 aaatctcttc atcgggccag agcattgcag aaacgtcatg aagattttga agaagtggca
1801 cagaacacat acaccaatgc ggataaatta ctggaagcag cagaacagct ggctcagact
1861 ggggaatgtg accccgaaga gatttatcag gctgcccatc agctggaaga ccggattcaa
1921 gatttcgttc ggcgtgttga gcagcgaaag atcctactgg acatgtcagt gtcctttcac
1981 acccatgtga aagagctgtg gacgtggctg gaggagctgc agaaggagct gctggacgac
2041 gtgtatgccg agtcggtgga ggccgtgcag gacctcatca agcgctttgg ccagcagcag
2101 cagaccaccc tgcaggtgac tgtcaacgtg atcaaggaag gggaggacct catccagcag
2161 ctcagggact ctgccatctc cagtaacaag accccccaca acagctccat caaccacatt
2221 gagacggtgc tgcagcagct ggacgaggcg cagtcgcaga tggaggagct cttccaggag
2281 cgcaagatca agctggagct cttcctgcag ctgcgcatct tcgagaggga cgccatcgac
2341 attatctcag acctcgagtc ttggaatgat gagctttctc agcaaatgaa tgacttcgac
2401 acagaagatc tcacgattgc agagcagcgc ctccagcacc atgcagacaa agccttgacc
2461 atgaacaact tgacttttga cgtcatccac caagggcaag atcttctgca gtatgtcaat
2521 gaggtccagg cctctggtgt ggagctgctg tgtgatagag atgtagacat ggcaactcgg
2581 gtccaggacc tgctggagtt tcttcatgaa aaacagcagg aattggattt agccgcagag
2641 cagcatcgga aacacctgga gcagtgcgtg cagctgcgcc acctgcaggc agaagtgaaa
2701 caggtgctgg gttggatccg caacggagag tccatgttaa atgccggact tatcacagcc
2761 agctcgttac aagaggcaga gcagctccag cgagagcacg agcagttcca gcatgccatt
2821 gagaaaacac atcagagcgc gctgcaggtg cagcagaagg cagaagccat gctacaggcc
2881 aaccactacg acatggacat gatccgggac tgcgccgaga aggtggcgtc tcactggcaa
2941 cagctcatgc tcaagatgga agatcgcctc aagctcgtca acgcctctgt cgctttctac
3001 aaaacctcag agcaggtctg cagcgtcctc gagagcctgg aacaggagta caagagagaa
3061 gaagactggt gtggcggggc ggataagctg ggcccaaact ctgagacgga ccacgtgacg
3121 cccatgatca gcaagcacct ggagcagaag gaggcattcc tgaaggcttg cacccttgct
3181 cggaggaatg cagacgtctt cctgaaatac ctgcacagga acagcgtgaa catgccagga
3241 atggtgacgc acatcaaagc tcctgaacag caagtgaaaa atatcttgaa tgaactcttc
3301 caacgggaga acagggtatt gcattactgg accatgagga agagacggct ggaccagtgt
3361 cagcagtacg tggtctttga gaggagtgcc aagcaggctt tggaatggat ccatgacaat
3421 ggcgagttct acctttccac acacacctcc acgggctcca gtatacagca cacccaggag
3481 ctcctgaaag agcacgagga gttccagata actgcaaagc aaaccaaaga gagagtgaag
3541 ctattgatac agctggctga tggcttttgt gaaaaagggc atgcccatgc ggcagagata
3601 aaaaaatgtg ttactgctgt ggataagagg tacagagatt tctctctgcg gatggagaag
3661 tacaggacct ctttggaaaa agccctgggg atttcttcag attccaacaa atcgagtaaa
3721 agtctccagc tagatatcat tccagccagt atccctggct cagaggtgaa acttcgagat
3781 gctgctcatg aacttaatga agagaagcgg aaatctgccc gcaggaaaga gttcataatg
3841 gctgagctca ttcaaactga aaaggcttat gtaagagacc tccgggaatg tatggatacg
3901 tacctgtggg aaatgaccag tggcgtggaa gagattccac ctggcattgt aaacaaagaa
3961 ctcatcatct tcggaaacat gcaagaaatc tacgaatttc ataataacat attcctaaag
4021 gagctggaaa aatatgaaca gttgccagag gatgttggac attgttttgt tacttgggca
4081 gacaagtttc agatgtatgt cacatattgc aaaaataagc ctgattctac tcagctgata
4141 ttggaacatg cagggtccta ttttgacgag atacagcagc gacatggatt agccaattcc
4201 atttcttcct accttattaa accagttcag cgaataacga agtatcagct ccttttaaaa
4261 gagctgctga cgtgctgtga ggaaggaaag ggagagatta aagatggcct ggaggtgatg
4321 ctcagcgtgc cgaagcgagc caatgacgcc atgcacctca gcatgctgga agggtttgat
4381 gaaaacattg agtctcaggg agaactcatc ctacaggaat ccttccaagt gtgggaccca
4441 aaaaccttaa ttcgaaaggg tcgagaacgg catctcttcc tttttgaaat gtccttagta
4501 tttagtaaag aagtgaaaga ttccagtggg agaagcaagt acctttataa aagcaaattg
4561 tttacctcag agttgggtgt cacagaacat gttgaaggag acccttgcaa atttgcactg
4621 tgggtgggga gaacaccaac ttcagataat aaaattgtcc ttaaggcttc cagcatagag
4681 aacaagcagg actggataaa gcatatccgc gaagtcatcc aggagcggac gatccacctg
4741 aagggagccc tgaaggagcc cattcacatc cctaagaccg ctcccgccac aagacagaag
4801 ggaaggaggg atggagagga tctggacagc caaggagacg gcagcagcca gcctgatacg
4861 atttccatcg cctcacggac gtctcagaac acgctggaca gcgataagct ctctggtggc
4921 tgtgagctga cagtggtgat ccatgacttc accgcttgca acagcaacga gctgaccatc
4981 cgacggggcc agaccgtgga agttctgga
//