LOCUS BC035407 1760 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens interleukin 3 receptor, alpha (low affinity), mRNA (cDNA clone MGC:34174 IMAGE:5167281), complete cds. ACCESSION BC035407 VERSION BC035407.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1760) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1760) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 52 Row: o Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 28416950. FEATURES Location/Qualifiers source 1..1760 /db_xref="H-InvDB:HIT000051392_04" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34174 IMAGE:5167281" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1760 /gene="IL3RA" /gene_synonym="CD123" /gene_synonym="hIL-3Ra" /gene_synonym="IL3R" /gene_synonym="IL3RAY" /gene_synonym="IL3RX" /gene_synonym="IL3RY" /gene_synonym="MGC34174" /db_xref="GeneID:3563" /db_xref="HGNC:HGNC:6012" /db_xref="MIM:430000" CDS 350..1486 /gene="IL3RA" /gene_synonym="CD123" /gene_synonym="hIL-3Ra" /gene_synonym="IL3R" /gene_synonym="IL3RAY" /gene_synonym="IL3RX" /gene_synonym="IL3RY" /gene_synonym="MGC34174" /codon_start=1 /product="interleukin 3 receptor, alpha (low affinity)" /protein_id="AAH35407.1" /db_xref="GeneID:3563" /db_xref="HGNC:HGNC:6012" /db_xref="MIM:430000" /translation="MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLN RNVTDIECVKDADYSMPAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGK PWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQG TRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCN KTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARE RVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRL FPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT" BASE COUNT 461 a 456 c 457 g 386 t ORIGIN 1 gtcaggttca tggttacgaa gctgctgacc ccaggatccc agcccgtggg agagaagggg 61 gtctctgaca gcccccaccc ctccccactg ccagatcctt attgggtctg agtttcaggg 121 gtggggcccc agctggaggt tataaaacag ctcaatcggg gagtacaacc ttcggtttct 181 cttcggggaa agctgctttc agcgcacacg ggaagatatc agaaacatcc taggatcagg 241 acaccccaga tcttctcaac tggaaccacg aaggctgttt cttccacaca gcactttgat 301 ctccatttaa gcaggcacct ctgtcctgcg ttccggagct gcgttcccga tggtcctcct 361 ttggctcacg ctgctcctga tcgccctgcc ctgtctcctg caaacgaagg aagatccaaa 421 cccaccaatc acgaacctaa ggatgaaagc aaaggctcag cagttgacct gggaccttaa 481 cagaaatgtg accgatatcg agtgtgttaa agacgccgac tattctatgc cggcagtgaa 541 caatagctat tgccagtttg gagcaatttc cttatgtgaa gtgaccaact acaccgtccg 601 agtggccaac ccaccattct ccacgtggat cctcttccct gagaacagtg ggaagccttg 661 ggcaggtgcg gagaatctga cctgctggat tcatgacgtg gatttcttga gctgcagctg 721 ggcggtaggc ccgggggccc ccgcggacgt ccagtacgac ctgtacttga acgttgccaa 781 caggcgtcaa cagtacgagt gtcttcacta caaaacggat gctcagggaa cacgtatcgg 841 gtgtcgtttc gatgacatct ctcgactctc cagcggttct caaagttccc acatcctggt 901 gcggggcagg agcgcagcct tcggtatccc ctgcacagat aagtttgtcg tcttttcaca 961 gattgagata ttaactccac ccaacatgac tgcaaagtgt aataagacac attcctttat 1021 gcactggaaa atgagaagtc atttcaatcg caaatttcgc tatgagcttc agatacaaaa 1081 gagaatgcag cctgtaatca cagaacaggt cagagacaga acctccttcc agctactcaa 1141 tcctggaacg tacacagtac aaataagagc ccgggaaaga gtgtatgaat tcttgagcgc 1201 ctggagcacc ccccagcgct tcgagtgcga ccaggaggag ggcgcaaaca cacgtgcctg 1261 gcggacgtcg ctgctgatcg cgctggggac gctgctggcc ctggtctgtg tcttcgtgat 1321 ctgcagaagg tatctggtga tgcagagact ctttccccgc atccctcaca tgaaagaccc 1381 catcggtgac agcttccaaa acgacaagct ggtggtctgg gaggcgggca aagccggcct 1441 ggaggagtgt ctggtgactg aagtacaggt cgtgcagaaa acttgagact ggggttcagg 1501 gcttgtgggg gtctgcctca atctccctgg ccgggccagg cgcctgcaca gactggctgc 1561 tggacctgcg cacgcagccc aggaatggac attcctaacg ggtggtgggc atgggagatg 1621 cctgtgtaat ttcgtccgaa gctgccagga agaagaacag aactttgtgt gtttatttca 1681 tgataaagtg attttttttt ttttaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1741 aaaaaaaaaa aaaaaaaaaa //