LOCUS BC035374 1600 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 83, mRNA (cDNA clone
MGC:35300 IMAGE:5176979), complete cds.
ACCESSION BC035374
VERSION BC035374.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1600)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1600)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23308504.
FEATURES Location/Qualifiers
source 1..1600
/db_xref="H-InvDB:HIT000051386"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35300 IMAGE:5176979"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1600
/gene="C1orf83"
/gene_synonym="FLJ32112"
/gene_synonym="RP4-758J24.3"
/db_xref="GeneID:127428"
/db_xref="HGNC:HGNC:26494"
CDS 134..760
/gene="C1orf83"
/gene_synonym="FLJ32112"
/gene_synonym="RP4-758J24.3"
/codon_start=1
/product="chromosome 1 open reading frame 83"
/protein_id="AAH35374.1"
/db_xref="GeneID:127428"
/db_xref="HGNC:HGNC:26494"
/translation="MDKFVIRTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKR
WKTMLELPDQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLARE
VYTEWKTFTEKHSNRPSIEVRSDPKTESLRKNAQKLLSEALELKMDHLLVENIERETF
HLCSRLINGPYRRTVRALVFTLKHRAEIRAQVKSGSLPVGTFVQTHKK"
BASE COUNT 466 a 373 c 373 g 388 t
ORIGIN
1 gtttagtttc aacacagacg actgggcttg ggagcctacg aggttgcagt ctggagggcg
61 ccaacagcag ctaccagggc tgcttttcct gaacacgctg caagcacgtc aaggtagtcg
121 gagtccccta acaatggata aattcgtcat tcgaacgcct agaatccaga atagccctca
181 gaagaaagat tctggaggaa aggtttacaa gcaggccacg attgaatctc tgaagagagt
241 tgtggttgta gaagacataa aaagatggaa aactatgctg gagcttcctg atcaaaccaa
301 agagaatctt gttgaagcct tacaagaatt aaagaagaaa ataccctcca gggaagtgtt
361 aaaatcaaca aggataggtc acactgtgaa caagatgcgt aaacactcag attcagaagt
421 ggcttctctt gccagagaag tttacactga gtggaaaact ttcactgaaa aacattcaaa
481 tagaccttct attgaagtta gaagtgatcc caaaaccgag tcgttgagga aaaatgctca
541 gaaattactc tcagaagcct tggaattaaa gatggatcac ctactggttg aaaatattga
601 acgggaaacg tttcatctct gctcccgcct cattaatggg ccgtaccggc ggacggtgag
661 agccctggtc ttcacattaa agcaccgagc tgaaatccgg gctcaggtga agagcggctc
721 gctgccagtc ggcacgtttg tacagaccca caaaaagtga cctgaggacg gttccagccc
781 tgggccaggc agagaggaaa atgggcctgt ctctgccgtt caaagacgct tttgagtttg
841 ggtgatggct gatgctggct gtgctagatt ttcccatggt gccgttcctt tgcagacaga
901 ggattcggag agccctagga gacaggcctg caggaatgtg cttcattagc tgcagtgcgc
961 tggtgctgcc taacagaacg cacactggct gtcactagga agcgccatac ggttgctatc
1021 acccaacatg gtgaaagggt gatggatttc actgtgagta tgccaaggac acctctaaac
1081 ttcccccatg tcagtcagat gaagttacta ctatatttca ccaccctgca ggtaactgaa
1141 actcaattac cgctgccgct cactcggttc catccccctg agtttagata gctctggtgc
1201 ctctcagaac tcccctgtct gttctctttg ctctatccca ggggtgagcc tgcgagagcc
1261 agccaactac cccttcttcc cagagctcac ttatctgaac gtttcagctc tccctggaag
1321 accttctgcg ttggtctcca gagcccccat gctgaggcta ctaatgagga actggcccga
1381 agcctcccac acctcagggt ttatttgaat acgctggcgc tctcagttta gggctctgta
1441 gaagatacat aatgaaattt ctcttgaaat gaattactgc agtagaaaaa agtacataca
1501 tatatatgtt aaaatgaaat atctctacac aggcctgttt taacaattac gtaaataata
1561 cttgtttttt taaaagtaaa aaaaaaaaaa aaaaaaaaaa
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