LOCUS BC035364 2230 bp mRNA linear HUM 19-JUL-2004 DEFINITION Homo sapiens FYVE, RhoGEF and PH domain containing 5, mRNA (cDNA clone IMAGE:5171976), complete cds. ACCESSION BC035364 VERSION BC035364.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2230) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2230) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 51 Row: g Column: 18 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2230 /db_xref="H-InvDB:HIT000051382" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5171976" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2230 /gene="FGD5" /gene_synonym="ZFYVE23" /db_xref="GeneID:152273" CDS 314..1936 /gene="FGD5" /gene_synonym="ZFYVE23" /codon_start=1 /product="FGD5 protein" /protein_id="AAH35364.1" /db_xref="GeneID:152273" /translation="MRALDDMDHEGRDTLAREELRQGLSELPAIHDLHQGILEELEER LSNWESQQKVADVFLAREQGFDHHATHILQFDRYLGLLSENCLHSPRLAAAVREFEQS VQGGSQTAKHRLLRVVQRLFQYQVLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRAN DSMEQGENLQKLVHIEHSVRGQGDLLQPGREFLKEGTLMKVTGKNRRPRHLFLMNDVL LYTYPQKDGKYRLKNTLAVANMKVSRPVMEKVPYALKIETSESCLMLSASSCAERDEW YGCLSRALPEDYKAQALAAFHHSVEIRERLGVSLGERPPTLVPVTHVMMCMNCGCDFS LTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGELKKRGRAVPGLMRER PVSMSFPLSSPRFSGSAFSSVFQSINPSTFKKQKKVPSALTEVAASGEGSAISGYLSR CKRGKRHWKKLWFVIKGKVLYTYMASEDKVALESMPLLGFTIAPEKEEGSSEVGPIFH LYHKKTLFYSFKAEDTNSAQRWIEAMEDASVL" BASE COUNT 573 a 591 c 581 g 485 t ORIGIN 1 tgaagcccct gggtgtggaa acagctctgc accccttctt gattgctgaa cactatgatg 61 tgaatatttc tacatagcca ccacctttat catttttagt gacagcttaa tataccatag 121 ggtggatgcc tataatttcc ttagacttcg ttttgaaaca acatagctca tgaacctctt 181 caaagatgaa taatgagaaa gcaaaacctt ctgcttcgtt atagaaggaa ttacccaatc 241 tctcccctat cttgaaaaag aagagtgttc accacgtggc cacaacgaga ggagagattt 301 ccatggagct gtcatgaggg ccttggatga catggaccat gaaggcagag acacattggc 361 ccgggaggag ctgaggcagg gcctgagtga actcccagcc atccacgacc ttcatcaagg 421 catcctggag gagctggagg aaaggctgtc aaattgggag agccagcaga aggtagctga 481 cgtcttcctt gcccgggagc aggggtttga tcaccacgcc actcacatcc tgcagttcga 541 caggtaccta ggtctgctca gtgagaattg cctccactct ccccggctgg cagctgctgt 601 ccgtgaattt gagcagagtg tacaaggagg cagccagact gcgaagcatc ggctgctgcg 661 ggtggttcaa cgcctcttcc agtaccaagt gctcctcaca gactatttaa acaacctttg 721 tccggactcc gccgagtacg acaacacaca gggtgcactg agcctcatct ccaaagtcac 781 agaccgtgcc aacgacagca tggagcaagg ggaaaacctg cagaagctgg tccacattga 841 gcacagcgtc cggggccaag gggatctcct ccagccagga agggagtttc tgaaggaagg 901 gacgctgatg aaagtaacag ggaaaaacag acggccccgg cacctatttc tgatgaacga 961 tgtgctcctg tacacctatc cccagaagga tgggaagtac cggctgaaga acacattggc 1021 tgtggccaac atgaaggtca gccgccctgt gatggagaaa gtgccctacg ctctaaagat 1081 tgagacttcc gagtcctgcc tgatgctgtc tgcgagctcc tgtgcagaga gggacgagtg 1141 gtatggctgt ctgagcagag ccctccctga ggactacaag gcccaggcgc tggctgcatt 1201 ccaccatagc gtggagatac gagagaggct gggggttagc cttggggaga ggccccccac 1261 cctggtgcct gtcacacacg tcatgatgtg catgaactgc ggctgcgact tctccctcac 1321 cctgcggcgt catcactgtc acgcctgtgg caagatcgtg tgccggaact gttcgcggaa 1381 caagtacccg ctgaagtacc tgaaggacag gatggccaag gtctgcgacg gctgcttcgg 1441 ggagctgaag aagcggggca gggctgtccc gggcctgatg agagagcggc ctgtgagcat 1501 gagcttcccg ctgtcttcac cccgcttctc gggcagtgcc ttttcatccg tcttccagag 1561 cattaacccc tcgaccttca agaagcagaa gaaagtccct tcagccctga cagaggtggc 1621 tgcctctgga gagggctctg ccatcagtgg ctatctcagc cggtgtaaga ggggcaagcg 1681 gcactggaag aagctctggt ttgtcatcaa aggcaaagtt ctctacacct acatggccag 1741 tgaggacaaa gtggccttgg agagtatgcc tctgctaggc ttcaccattg ctccagaaaa 1801 ggaagagggc agcagtgaag taggacctat ttttcacctt taccacaaga aaaccctatt 1861 ttatagcttc aaagcagaag ataccaattc agctcagagg tggatcgagg ccatggaaga 1921 tgcgagtgtg ttatagcagt tatcaagcat gtggacttgt aacaaattct taggtcaata 1981 tgtgaatgct tttagaagct aagctgtggc tcaactcatc cggacacaca cctggattca 2041 gcaatgaggc ctgacctttt ttgctataac cgccccacca ctcccctgcc cttgccaaca 2101 tcttcatgaa tggaatcctt aagggatatt tatggacctc tccttttctg tgttttccac 2161 ccctaccccc acccgccacc cagtaataaa ctatttcctt accccgcaaa aaaaaaaaaa 2221 aaaaaaaaaa //