LOCUS       BC035364                2230 bp    mRNA    linear   HUM 19-JUL-2004
DEFINITION  Homo sapiens FYVE, RhoGEF and PH domain containing 5, mRNA (cDNA
            clone IMAGE:5171976), complete cds.
ACCESSION   BC035364
VERSION     BC035364.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 51 Row: g Column: 18
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..2230
                     /db_xref="H-InvDB:HIT000051382"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:5171976"
                     /tissue_type="Brain, adult medulla"
                     /clone_lib="NIH_MGC_119"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2230
                     /gene="FGD5"
                     /gene_synonym="ZFYVE23"
                     /db_xref="GeneID:152273"
     CDS             314..1936
                     /gene="FGD5"
                     /gene_synonym="ZFYVE23"
                     /codon_start=1
                     /product="FGD5 protein"
                     /protein_id="AAH35364.1"
                     /db_xref="GeneID:152273"
                     /translation="MRALDDMDHEGRDTLAREELRQGLSELPAIHDLHQGILEELEER
                     LSNWESQQKVADVFLAREQGFDHHATHILQFDRYLGLLSENCLHSPRLAAAVREFEQS
                     VQGGSQTAKHRLLRVVQRLFQYQVLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRAN
                     DSMEQGENLQKLVHIEHSVRGQGDLLQPGREFLKEGTLMKVTGKNRRPRHLFLMNDVL
                     LYTYPQKDGKYRLKNTLAVANMKVSRPVMEKVPYALKIETSESCLMLSASSCAERDEW
                     YGCLSRALPEDYKAQALAAFHHSVEIRERLGVSLGERPPTLVPVTHVMMCMNCGCDFS
                     LTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGELKKRGRAVPGLMRER
                     PVSMSFPLSSPRFSGSAFSSVFQSINPSTFKKQKKVPSALTEVAASGEGSAISGYLSR
                     CKRGKRHWKKLWFVIKGKVLYTYMASEDKVALESMPLLGFTIAPEKEEGSSEVGPIFH
                     LYHKKTLFYSFKAEDTNSAQRWIEAMEDASVL"
BASE COUNT          573 a          591 c          581 g          485 t
ORIGIN      
        1 tgaagcccct gggtgtggaa acagctctgc accccttctt gattgctgaa cactatgatg
       61 tgaatatttc tacatagcca ccacctttat catttttagt gacagcttaa tataccatag
      121 ggtggatgcc tataatttcc ttagacttcg ttttgaaaca acatagctca tgaacctctt
      181 caaagatgaa taatgagaaa gcaaaacctt ctgcttcgtt atagaaggaa ttacccaatc
      241 tctcccctat cttgaaaaag aagagtgttc accacgtggc cacaacgaga ggagagattt
      301 ccatggagct gtcatgaggg ccttggatga catggaccat gaaggcagag acacattggc
      361 ccgggaggag ctgaggcagg gcctgagtga actcccagcc atccacgacc ttcatcaagg
      421 catcctggag gagctggagg aaaggctgtc aaattgggag agccagcaga aggtagctga
      481 cgtcttcctt gcccgggagc aggggtttga tcaccacgcc actcacatcc tgcagttcga
      541 caggtaccta ggtctgctca gtgagaattg cctccactct ccccggctgg cagctgctgt
      601 ccgtgaattt gagcagagtg tacaaggagg cagccagact gcgaagcatc ggctgctgcg
      661 ggtggttcaa cgcctcttcc agtaccaagt gctcctcaca gactatttaa acaacctttg
      721 tccggactcc gccgagtacg acaacacaca gggtgcactg agcctcatct ccaaagtcac
      781 agaccgtgcc aacgacagca tggagcaagg ggaaaacctg cagaagctgg tccacattga
      841 gcacagcgtc cggggccaag gggatctcct ccagccagga agggagtttc tgaaggaagg
      901 gacgctgatg aaagtaacag ggaaaaacag acggccccgg cacctatttc tgatgaacga
      961 tgtgctcctg tacacctatc cccagaagga tgggaagtac cggctgaaga acacattggc
     1021 tgtggccaac atgaaggtca gccgccctgt gatggagaaa gtgccctacg ctctaaagat
     1081 tgagacttcc gagtcctgcc tgatgctgtc tgcgagctcc tgtgcagaga gggacgagtg
     1141 gtatggctgt ctgagcagag ccctccctga ggactacaag gcccaggcgc tggctgcatt
     1201 ccaccatagc gtggagatac gagagaggct gggggttagc cttggggaga ggccccccac
     1261 cctggtgcct gtcacacacg tcatgatgtg catgaactgc ggctgcgact tctccctcac
     1321 cctgcggcgt catcactgtc acgcctgtgg caagatcgtg tgccggaact gttcgcggaa
     1381 caagtacccg ctgaagtacc tgaaggacag gatggccaag gtctgcgacg gctgcttcgg
     1441 ggagctgaag aagcggggca gggctgtccc gggcctgatg agagagcggc ctgtgagcat
     1501 gagcttcccg ctgtcttcac cccgcttctc gggcagtgcc ttttcatccg tcttccagag
     1561 cattaacccc tcgaccttca agaagcagaa gaaagtccct tcagccctga cagaggtggc
     1621 tgcctctgga gagggctctg ccatcagtgg ctatctcagc cggtgtaaga ggggcaagcg
     1681 gcactggaag aagctctggt ttgtcatcaa aggcaaagtt ctctacacct acatggccag
     1741 tgaggacaaa gtggccttgg agagtatgcc tctgctaggc ttcaccattg ctccagaaaa
     1801 ggaagagggc agcagtgaag taggacctat ttttcacctt taccacaaga aaaccctatt
     1861 ttatagcttc aaagcagaag ataccaattc agctcagagg tggatcgagg ccatggaaga
     1921 tgcgagtgtg ttatagcagt tatcaagcat gtggacttgt aacaaattct taggtcaata
     1981 tgtgaatgct tttagaagct aagctgtggc tcaactcatc cggacacaca cctggattca
     2041 gcaatgaggc ctgacctttt ttgctataac cgccccacca ctcccctgcc cttgccaaca
     2101 tcttcatgaa tggaatcctt aagggatatt tatggacctc tccttttctg tgttttccac
     2161 ccctaccccc acccgccacc cagtaataaa ctatttcctt accccgcaaa aaaaaaaaaa
     2221 aaaaaaaaaa
//