LOCUS BC035307 4768 bp mRNA linear HUM 19-JUL-2004 DEFINITION Homo sapiens pleckstrin and Sec7 domain containing 4, mRNA (cDNA clone MGC:17283 IMAGE:4339380), complete cds. ACCESSION BC035307 VERSION BC035307.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4768) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4768) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: p Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..4768 /db_xref="H-InvDB:HIT000051364" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17283 IMAGE:4339380" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4768 /gene="PSD4" /gene_synonym="EFA6B" /gene_synonym="TIC" /db_xref="GeneID:23550" CDS 170..3253 /gene="PSD4" /gene_synonym="EFA6B" /gene_synonym="TIC" /codon_start=1 /product="PSD4 protein" /protein_id="AAH35307.1" /db_xref="GeneID:23550" /translation="MMGDYRLPDHPQPMEILNLYLGDSLEPHPGECPRETCSHEDPPE PFEEQTWATDPPEPTRQNVPPWGSGVELTHLGSWVHQDGLEPCQEQTRATDPPESTRQ DAPPWGSGVELTHLGSPSAQRDHRQNTASPGSPVNSHLPGSPKQNRSTSTQVVFWAGI LQAQMCVLDLEEELEKTEGLKAGLKCCLPTPPVDLPGDTGLHSSPPENEDSGEDSSEP EGEGQAWLREGTPDSSPQWGAEEESMFFSNPLFLASPCSENSASGECFSWAASDSHAG VRTGPESPATLEPPLPEDTVLWELESEPDLGDGAAISGHCTPPFPVPIYKPHSICWAS VAAAEGAPAAPPGHGESEGDRLGPAPSAAPCVDEALTWESGCVGSDLGPAAHPVQPWA SLSPEGWQRGGPFWPQVTLNSQDREPSSPESESRGPGPRPSPASSQEGSPQLQHHSSG ILPKWTLDASQSSLLETDGEQPSSLKKKEAGEAPKPGEEVKSEGTARPAETGDVQPDI HLTSAEHENLRTPMNSSWLPGSPMPQAQSPEEGQRPPAGDKLANGVRNNKVAWNLASR LYRLEGFRKSEVAAYLQKNNDFSRAVAEEYLSFFQFGGQSLDRALRSFLQALVLSGET QERERILYQFSRRFHHCNPGIFPSVDSVHTLTCAIMLLNTDLHGQNIGKSMSCQEFIT NLNGLRDGGNFPKELLKALYWSIRSEKLEWAVDEEDTARPEKAQPSLPAGKMSKPFLQ LAQDPTVPTYKQGILARKMHQDADGKKTPWGKRGWKMFHTLLRGMVLYFLKGEDHCLE GESLVGQMVDEPVGVHHSLATPATHYTKKPHVFQLRTADWRLYLFQAPTAKEMSSWIA RINLAAATHSAPPFPAAVGSQRRFVRPILPVGPAQSSLEEQHRSHENCLDAAADDLLD LQRNLPERRGRGRELEEHRLRKEYLEYEKTRYETYVQLLVARLHCPSDALDLWEEQLG REAGGTREPKLSLKKSHSSPSLHQDEAPTTAKVKRNISERRTYRKIIPKRNRNQL" BASE COUNT 1025 a 1445 c 1415 g 883 t ORIGIN 1 gccaggaagt gctcttgggg agcccaggcc aagccatcca ttcttgggtc ctttggaggg 61 tagatatgga ttcccagttt ctccagcggc cagtgctccc cctagtccac acagtgagac 121 cgtgaaagca gatgctccgg ggcactcctg ggcagctttt gctcagtgga tgatgggtga 181 ctacagactc cctgaccacc cccagcccat ggaaattctc aacctgtact tgggagacag 241 cctggagccc cacccaggag agtgcccaag ggaaacgtgc agccatgagg atccaccgga 301 gcctttcgag gagcaaacct gggccactga ccctcctgaa cctaccagac aaaatgttcc 361 tccctggggc tccggtgtgg agctcacaca cctggggagc tgggtccatc aggacgggct 421 ggagccttgc caggagcaaa cccgggccac tgaccctcct gaatctacca gacaagatgc 481 tcctccctgg ggctccggtg tggagctcac acacctgggg agcccctctg cccagaggga 541 tcacaggcag aacacagcat caccagggtc accagtgaac agccatctac cggggagccc 601 aaagcagaac cggagcacgt ccacacaggt agtgttctgg gcaggcatcc tgcaggccca 661 gatgtgtgtc ctagacctgg aggaggagct ggagaagacg gaagggctca aggctgggct 721 gaaatgctgt ctccccacgc cccctgtgga cctccccggg gacacgggcc tgcactccag 781 cccacctgag aatgaagact caggggaaga cagcagcgag cctgagggag agggccaggc 841 atggctgaga gagggaaccc cagactcttc cccacagtgg ggagctgagg aggagagcat 901 gttcttcagc aaccccctct tcctggcgag tccttgctca gagaacagtg cttctggaga 961 gtgcttttcc tgggcggctt cagactccca tgcaggtgtg aggactggac ctgagagccc 1021 agcgactctg gagcctcccc tcccagaaga cacagtgctg tgggagctgg aaagtgagcc 1081 agatttgggg gacggcgctg ctatcagtgg gcattgtacc cctccattcc ctgtgcccat 1141 ctataaacca cactccatct gctgggcctc agtggctgcc gctgaggggg ctcctgcagc 1201 acctcctggt cacggggaga gtgagggaga taggcttggt cctgctccat ctgcagcacc 1261 gtgtgtggac gaagcattga cctgggaatc aggatgtgtc ggatctgatc ttggccctgc 1321 tgcacatcct gtgcaacctt gggcctctct cagccctgag ggctggcaga gaggaggtcc 1381 tttttggccc caggtgactc ttaactccca ggacagagag cctagcagcc cagaatctga 1441 gagcagaggc cctggtccca ggcccagccc tgcatcgtcc caggagggca gcccgcagct 1501 tcaacaccac agctcaggca ttttgcccaa gtggacacta gatgcttcac agtcttcact 1561 cttggagacg gatggggaac agccaagttc cttgaagaaa aaggaggcag gggaggcccc 1621 aaaaccaggc gaggaagtaa agagtgaagg aacagccagg cctgcagaga ctggagacgt 1681 ccagcctgac attcacctga cttctgcaga acatgagaat ctgaggacac cgatgaactc 1741 ttcttggctt cctgggagcc ctatgcccca agcacagtcc ccagaggaag gccagagacc 1801 accagctgga gacaagctag ctaatggcgt caggaacaac aaggtagcct ggaacttggc 1861 ctcacgcctc tatcgcctgg agggcttccg gaagtctgaa gtggctgcct acctgcagaa 1921 gaacaatgac tttagcaggg ctgtggctga ggagtacctg tccttcttcc agtttggagg 1981 ccagagtctg gaccgagccc tccggagctt cctccaggcc ttggtgctca gtggggagac 2041 tcaggaacgg gagcgaatcc tctaccagtt ctccagacgc ttccaccatt gcaatccggg 2101 gatcttcccc tcagtagatt ctgtacacac cttgacatgt gcaatcatgc tgcttaacac 2161 ggacctgcat ggacagaaca ttgggaagag catgagctgc caggaattca taaccaacct 2221 gaatgggctg agggatggcg ggaacttccc caaggagctg ctgaaggccc tctactggtc 2281 tatccgcagc gagaagctcg agtgggccgt ggatgaagaa gacacagcca gacctgagaa 2341 ggcccagccg tccctgccag ctggcaagat gagcaagccc ttccttcagc tggctcagga 2401 tcccacagtg cccacctaca agcagggcat cctggctcgg aaaatgcatc aagatgcaga 2461 cggcaagaag acgccatggg gcaagcgtgg ctggaagatg ttccacacct tactgcgagg 2521 gatggttctc tacttcctga agggagaaga ccactgtctg gagggggaga gcttggtggg 2581 gcagatggtg gatgagcccg tgggggtgca ccactcgctg gccacccccg ccacgcatta 2641 caccaagaag ccgcacgtct tccagctgcg cacggctgac tggcgcctct acctcttcca 2701 ggcacccact gccaaggaga tgagctcctg gatcgcgcgc atcaacttgg ctgcggccac 2761 ccactccgcg ccgcccttcc ccgccgctgt gggctcccag cgcagattcg tgcggcccat 2821 cctgcccgtg ggccccgccc agagctccct ggaggagcag catcgatccc acgagaactg 2881 cctggacgct gccgcggacg acctgctgga tctacagagg aacctgccgg agcggcgggg 2941 ccgtggccgc gagctggagg agcaccgcct gcggaaggag tacctggagt acgagaaaac 3001 ccgctacgag acctacgtgc agctgctggt ggcccgcctg cactgcccct ctgatgctct 3061 ggacctgtgg gaggagcagc tggggaggga agctggaggc actcgggagc ccaagctcag 3121 cctgaagaag tcccactcga gcccgtccct gcaccaggat gaggctccca ccacggccaa 3181 ggtgaagcgc aacatctcag agcgcagaac ctaccggaag atcatcccta agcggaaccg 3241 caatcagctg tgaagccagc accacctcag agacactgtt ccctgctcca gggtagacct 3301 gagatgaacc tccctggagg agacttattt caatgagtcc accatgacgg atgaggcacc 3361 tcctttccct gctgaaggac aaaccttgtt tccctgtggc cctcattctt gtgctccctg 3421 aagctttcct aatattgctg tgctccccac cacccccatg gcagtccctc cgcagcccca 3481 gtccctggcc acgcccaagg gaagagggag gtgaggactt gactttcctc ccagagctca 3541 gcccatgtca ccctccaggc cccagaatcc agagtggcct catttcctag acttgctgag 3601 aactcagcac ttgtttgaga accagtgctt atgtggtgtg cccttggctt ctgggggaga 3661 gcttggggca gcagaggccc ctgggcagcc cagccagggg agccacagcc ccgaggatgg 3721 tcttgctctg ggaattaggt gaccttcctg gggaggcccc aggagagtga atcagggact 3781 cttgagaaat tcctaaccag cctcctgtga cccagggagc agggtcgcta aggtcctgcc 3841 cactgagggg acagccttct gggcagggac ctcggggggc ttcaagggct ctgcacggct 3901 gtggggccct gtgcctttgt ctccttgtgt ctcctttccc ccgaagtaga tgaaacagtc 3961 tcacataccc aactgctcat caacagagca gagctgatgg catgagtgag ggctgggcgg 4021 ggtggggcct ccagagcttt gcagggaacc ctggaaccct aggaacaagg agcctttgtt 4081 ccaacagagc agagaaggag gttctctatg ttcagaccac tggagaggat agagaggtaa 4141 aaggtggcga cagtttccct taggggtctg cctggcagga gccacagctc aggagagttg 4201 tgagggatgg gacggaggct ggcgaccagg cgaggcctag gccaggctcg ggagactttt 4261 ctgtgctcct ttctacacat gccttaaacc ttccttcctg tggggtgcct ggaccccttc 4321 cccatctctg gcagctcaga gggtctctgc tgctctcccc tgggaaatcc cctcatcctg 4381 ccctctggct gcctcccagc tgggcttgtt ctctgaggga ggttccggag actcatggac 4441 ttggggctct gcctgtagga aggagtctgg gccggaggga ccagccacca ttgtctctgt 4501 tcagccaagt gtgcaagtag gctgcccgcc aagagggggc ctctgctacc cgctgctgcc 4561 tgccggctga cacactgcct ccccagcctt cctgctaggc caccctcctc ccttcccatg 4621 cttgtaacca gctctggggc ttgcacctcc acaaagtaag gttggccctt ggaggccatg 4681 tttgggtctc cggccagggc ctagggctag gccatgcacc caatgggtgc acaataaata 4741 acaggtcaac aaaaaaaaaa aaaaaaaa //