LOCUS BC035259 2857 bp mRNA linear HUM 01-SEP-2008
DEFINITION Homo sapiens DEK oncogene, mRNA (cDNA clone MGC:29866
IMAGE:5122743), complete cds.
ACCESSION BC035259
VERSION BC035259.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2857)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2857)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: n Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542502.
FEATURES Location/Qualifiers
source 1..2857
/db_xref="H-InvDB:HIT000051357"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29866 IMAGE:5122743"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2857
/gene="DEK"
/gene_synonym="D6S231E"
/db_xref="GeneID:7913"
/db_xref="HGNC:HGNC:2768"
/db_xref="MIM:125264"
CDS 166..1293
/gene="DEK"
/gene_synonym="D6S231E"
/codon_start=1
/product="DEK oncogene"
/protein_id="AAH35259.1"
/db_xref="GeneID:7913"
/db_xref="HGNC:HGNC:2768"
/db_xref="MIM:125264"
/translation="MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDDEEEE
EEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSKKK
TDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSVQYKKKEEMLKKFRNAMLKSI
CEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAK
RTKCPEILSDESSSDEDEKKNKEESSDDEDKESEEEPPKKTAKREKPKQKATSKSKKS
VKSANVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLA
SANLEEVTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS"
BASE COUNT 1004 a 465 c 586 g 802 t
ORIGIN
1 ttttgaaaat cttgttgatt ctggggagcc gagcgcgcgg cgcgagcgtc acgccagaca
61 gcggcccgcg cgccttctcc tcggcgtcgg ccgccgccgc ctcccagaac ctcctcgtgc
121 cctcgcgtgc caggcccgcg gcggccgaaa tccgcggttc acagcatgtc cgcctcggcc
181 cctgctgcgg agggggaggg aacccccacc cagcccgcgt ccgagaaaga acccgaaatg
241 cccggtccca gagaggagag cgaggaggaa gaggacgagg acgacgagga ggaggaggag
301 gaggaaaaag aaaagagtct catcgtggaa ggcaagaggg aaaagaaaaa agtagagagg
361 ttgacaatgc aagtctcttc cttacagaga gagccattta caattgcaca aggaaagggg
421 cagaaacttt gtgaaattga gaggatacat ttttttctaa gtaagaagaa aaccgatgaa
481 cttagaaatc tacacaaact gctttacaac aggccaggca ctgtgtcctc attaaagaag
541 aatgtgggtc agttcagtgg ctttccattt gaaaaaggaa gtgtccaata taaaaagaag
601 gaagaaatgt tgaaaaaatt tagaaatgcc atgttaaaga gcatctgtga ggttcttgat
661 ttggagagat caggtgtaaa tagtgaacta gtgaagagga tcttgaattt cttaatgcat
721 ccaaagcctt ctggcaaacc attgccgaaa tctaaaaaaa cttgtagcaa aggcagtaaa
781 aaggaacgga acagttctgg aatggcaagg aaggctaagc gaaccaaatg tcctgaaatt
841 ctgtcagatg aatctagtag tgatgaagat gaaaagaaaa acaaggaaga gtcttcagat
901 gatgaagata aagaaagtga agaggagcca ccaaaaaaga cagccaaaag agaaaaacct
961 aaacagaaag ctacttctaa aagtaaaaaa tctgtgaaaa gtgccaatgt taagaaagca
1021 gatagcagca ccaccaagaa gaatcaaaac agttccaaaa aagaaagtga gtctgaggat
1081 agttcagatg atgaaccttt aattaaaaag ttgaagaaac cccctacaga tgaagagtta
1141 aaggaaacaa taaagaaatt actggccagt gctaacttgg aagaagtcac aatgaaacag
1201 atttgcaaaa aggtctatga aaattatcct acttatgatt taactgaaag aaaagatttc
1261 ataaaaacaa ctgtaaaaga gctaatttct tgagatagag gacagagaag atgactcgtt
1321 cccatagatt tgaagatctg atttatacca ttataccagc aaagagaatg tatttccttt
1381 tctaaatcct tgttaagcaa cgttagtaga acttactgct gaccttttta tcttgagtgt
1441 tatgtgaatt tgagtttgct gttttaaatt gcatttctat gccattttta gtttaaaatc
1501 ttgcatggca ttaattgttc cttgctttta tagttgtatt ttgtacattt tggatttctt
1561 tatataaggt catagattct tgagctgttg tggtttttag tgcacttaat attagcttgc
1621 ttaaggcata cttttaatca agtagaacaa aaactattat caccaggatt tatacataca
1681 gagattgtag tatttagtat atgaaatatt ttgaatacac atctctgtca gtgtgaaaat
1741 tcagcggcag tgtgtccatc atattaaaaa tatacaagct acagttgtcc agatcactga
1801 attggaactt ttctcctgca tgtgtatata tgtcaaattg tcagcatgac aaaagtgaca
1861 gatgttattt ttgtattttt aaaaaacaat tggttgtata taaagttttt ttatttcttt
1921 tgtgcagatc actttttaaa ctcacatagg taggtatctt tatagttgta gactatggaa
1981 tgtcagtgtt cagccaaaca gtatgatgga acagtgaaag tcaattcagt gatggcaaca
2041 ctgaaggaac agttaccctg ctttgcctcg aaagtgtcat caatttgtaa ttttagtatt
2101 aactctgtaa aagtgtctgt aggtacgttt tatattatat aaggacagac caaaaatcaa
2161 cctatcaaag cttcaaaaac tttgggaaag ggtgggatta agtacaagca catttggctt
2221 acagtaaatg aactgatttt tattaactgc ttttgcccat ataaaatgct gatatttact
2281 ggaaacctag ccagcttcac gattatgact aaagtaccag attataatgc cagaatataa
2341 tgtgcaggca atcgtggatg tctctgacaa agtgtgtctc aaaaataata tacttttaca
2401 ttaaagaaat ttaatgtttc tctggagttg gggctcttgg ctttcagagt ttggttaatc
2461 agtgttgatt ctagatgatc aacataatgg accactcctg aatgagactt aattttgtct
2521 ttcaaattta ctgtcttaaa tcagtttatt aaatctgaat tttaaaacat gctgtttatg
2581 acacaatgac acatttgttg caccaattaa gtgttgaaaa atatctttgc atcatagaac
2641 agaaatatat aaaaatatat gttgaatgtt aacaggtatt ttcacaggtt tgtttcttga
2701 tagttactca gacactaggg aaaggtaaat acaagtgaac aaaataagca actaaatgag
2761 acctaataat tggccttcga ttttaaatat ttgttcttat aaaccttgtc aataaaaata
2821 aatctaaatc aaaaaaaaaa aaaaaaaaaa aaaaaaa
//