LOCUS BC035248 1877 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens chromosome 3 open reading frame 15, mRNA (cDNA clone
IMAGE:4837061), partial cds.
ACCESSION BC035248
VERSION BC035248.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1877)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1877)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: k Column: 8.
FEATURES Location/Qualifiers
source 1..1877
/db_xref="H-InvDB:HIT000093794"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4837061"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..>1877
/gene="C3orf15"
/gene_synonym="AAT1"
/gene_synonym="AAT1alpha"
/db_xref="GeneID:89876"
CDS 78..>1877
/gene="C3orf15"
/gene_synonym="AAT1"
/gene_synonym="AAT1alpha"
/codon_start=1
/product="C3orf15 protein"
/protein_id="AAH35248.1"
/db_xref="GeneID:89876"
/translation="MSHAVTIEEPQAQPQVSQTRYRERSRAGSHISSNRAYDFLYDPL
FIVSSEKDHTQANIQATLIRSRLRKVPRFKTMFSNLIHYPRYSLYWSKSDPVPPFISR
EWKGHKEKHREALRQLTTTDASFQMPKEVYEDPEVTGKNRYKYFERPFLPFFQQMPFN
VVYAVSKAEPYTFPPTSTKHLSIPSKSTVGTQTDYRDADVQTDPYSPEYVVCQDSIPE
LLTLATLTWGRGLPAGQAEVEMIERAREKRAWEASLPALSDTSQFEKRRKMMNEMERK
EWAFREQEIEKLQEIRLEVLKELLRKREENQNEVNMKHLNARWSKLQEGKEAKMAKIQ
RTHVSTIRKLVGKRKNIEGKLERRNIIKDYSDYASQVYGPLSRLGCFPDNNSEDFVVK
NYYLNTYEGLVELESCLPDFVTQPQIRAPKPKVITTKAGFLKRAARLDYELAEVHKAL
LDKKNKVLEVKKPPRFLQRNPIPQPRLPTPTLEMTSNEEEEMEMAVIYLQKLLRGRVV
QNMMFEGKEKRLELIQELRTCHALQEDEKLVKKAEKQVTLALQRQRNLHEHKVFLFLF
SCYFLVKFSPLILSSHSTIIIKINEMLKKKKKKK"
BASE COUNT 587 a 410 c 443 g 437 t
ORIGIN
1 gttgccatag cgacgtgcac gcagtagcca ggcctgaccc gcaggtccct tgctggcggg
61 aggaaggagg cggcaccatg agccacgcag taactatcga ggagccccag gcccagccgc
121 aggtgtctca aactcggtac cgggagaggt cgcgggctgg gagccacatc tcctccaatc
181 gagcgtatga ttttctgtac gatccattgt ttattgtgtc aagtgagaaa gaccatacac
241 aggcaaatat ccaagctacc ctgattcgca gcagactgag aaaagttccc aggtttaaaa
301 ccatgttcag taacctgatc cattatccaa gatattctct atattggagc aagtcagatc
361 ctgtcccacc atttatcagt cgggaatgga agggacataa ggagaaacac agagaagccc
421 tccggcagct caccacaact gacgcttctt ttcagatgcc taaagaagtt tatgaagatc
481 ctgaagttac tggaaagaat cgctataaat actttgaaag gccttttctc ccattttttc
541 agcagatgcc attcaatgtt gtttatgccg tatccaaggc agaaccatac acttttcctc
601 ctacttctac taagcaccta tccatccctt caaagtctac tgtgggcact cagactgatt
661 atcgggatgc tgacgttcaa acagatccat actctccaga atatgtagta tgtcaggact
721 caatccctga gctcttgacc ctggctacgc ttacttgggg tcggggtctc ccagcaggac
781 aagctgaggt ggagatgata gaaagagccc gcgagaagcg tgcttgggaa gcctctctcc
841 ccgctctgag tgacacctcc cagtttgaga agaggaggaa aatgatgaat gaaatggaga
901 ggaaggagtg ggccttcaga gagcaggaga ttgaaaaact gcaggagatt cgcctggaag
961 ttctaaaaga gctgttgagg aagcgtgaag agaatcagaa tgaagtgaat atgaagcact
1021 tgaatgcccg gtggtctaaa ctgcaggagg gaaaagaggc aaaaatggca aaaattcagc
1081 gcacgcatgt atcaacaatc agaaaacttg taggaaagag aaagaatata gaagggaagt
1141 tggagagaag aaatatcatc aaggattatt ctgattatgc atcacaggtc tatggacctc
1201 tgtctcgtct tgggtgtttc ccagacaaca actcagagga ctttgtagta aaaaactact
1261 atctcaacac ctatgaagga ttagtggaac ttgagtcatg tctcccagat tttgtgacac
1321 aaccccaaat cagagctcca aaacctaaag tcattaccac caaagctggt tttctgaaga
1381 gggcagcaag gttggactat gagttggcag aggttcataa ggcactgttg gataagaaga
1441 ataaagttct tgaagtaaag aaaccccctc gcttccttca aagaaaccca atacctcaac
1501 ctcggcttcc aactccaacc ttggaaatga cgtccaatga agaagaagaa atggaaatgg
1561 ctgtgatcta ccttcaaaag ttactccggg gcagagtcgt tcagaacatg atgtttgaag
1621 ggaaagaaaa gcgactggag ttgatccagg agttgcgcac ctgccacgca ctacaagaag
1681 atgaaaagct ggtgaaaaaa gccgagaagc aagtgaccct ggccttacag cggcagagga
1741 acttgcatga gcacaaggtt ttcctttttt tgttttcttg ttactttctt gttaaatttt
1801 ctcccttgat tttatcatca cacagcacca ttataataaa aattaatgaa atgttgaaaa
1861 agaaaaaaaa aaaaaaa
//