LOCUS BC035190 3519 bp mRNA linear HTC 09-SEP-2005
DEFINITION Homo sapiens WD repeats and SOF1 domain containing, mRNA (cDNA
clone IMAGE:5266509), with apparent retained intron.
ACCESSION BC035190
VERSION BC035190.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3519)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3519)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: p Column: 19
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3519
/db_xref="H-InvDB:HIT000051343"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5266509"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1073 a 572 c 652 g 1222 t
ORIGIN
1 agcggtaggt tcaagtgatt ctcctgcctc agcctcccta gtaactggga ttacaggtgt
61 gtgccaccac gcccaactaa cttttgtaat tttagtagag acaaggtttc accatgttgg
121 gcaggctggt ctaattaatt aagcttttta aacaatttaa ccaaaacaaa attctggcat
181 tagattcagc atatcaggag gtactctttg aagaccattg catttctttc tttttcagta
241 aaatgaaggg gaaaaaaagt gtgttgacct gaattgattt gatatgggga agaggccttt
301 taagatcaag tcctttcttt ttgttacaaa gttaccttgg ttgaacatca tattttattt
361 gcattttatg cttttagtta ttctgtgaac ttttctgtac atctggtttt gcttagtttg
421 ttcatattta tttctcttac tagatagtaa gttctctgag agcagaaatt tgtttactac
481 cccagcactt aacacggaac cttattagtt gggttcaata aaaatacatt gacaagaatt
541 tgagttttta ttttatactc ctataggact cagaaatagt atcctgatac ttaataggca
601 gtggttactc aaaatctgta ccaaaatcca aagggtttta acttaattcg ttttctatag
661 ggaggtatat catacaaaga gaatgcaaca tgttatctgt gtaaaatgga cttctgacag
721 caagtatatt atgtgtggat ctgatgaaat gaacattcgc ctgtggaaag ctaatgcttc
781 tgaaaaattg ggtgtggtaa gagaattcat tttctttcat tgtcataaag ctgatttcta
841 attttattag atattacatt atgaaaattt acttttaggt atttttgggt attttgatta
901 aattgacata gctgtgataa aaaaagcaat aaatggacaa ggttgtattg ataattattt
961 gcttcattct gatctattat tgtagacact gtacattcaa attgacattt aagaccttca
1021 gaatgccttt gttaattcag atgtttgata atattgagtc ttactggttt tttgtgtttt
1081 ccttgaggta gggacagaag atgcaggaac tagaggctca gaacttagag ctcgtatctc
1141 ttgttagaga aatagtcatc cagcaactca aaggctgcaa gtccctggga gatcttgtaa
1201 tatcaaagac acaatggaac atttaataaa tacagaaagc ttcatacttt aaaaaagatt
1261 ccatgaaaaa atagcaggtg ttatcattgg ctggttacct ccaggatagg ggattatggt
1321 tgattttgtt ttgttcttga tgtttttcta aatgtcccat attttctata agaaacagag
1381 tgtttatatt agaaataaat attaagttta agaaggaaag ggtaagtgtg aattattttc
1441 tacttagtcc tgataggaaa atcaaaggca attctgtttt aggtttaatg attgataagt
1501 attgcattgt gcctaggtcc atcattaaat gttcctctaa atcgtatcat ccttaacatt
1561 cgttaaacaa agggtagttc ttatggaatt ggatacttat tttttctttg ctgtttcact
1621 atgtttaact cacctcttta cccaccccca aaatttgagt gagtgattta ggtgcttttc
1681 tatgttattg atgcctaggg aaggtccaac tcagtgatcc acgtggccct actccttcag
1741 cactgctgct ttctactggg tggcatctat ctacatggcg agtgtgttgc ctaaaaggaa
1801 attcagtgct tgcagagcta gtgttactaa tataaccttg taaagtgcag aattacattg
1861 gcaattttgg ttgcatatca taaaagatta ggttaggggg aaaagggtgc tttctagctt
1921 ttttatactg aagcaaaaca acacactatt cattaagata ccaaaatgtg tattttcagc
1981 ttacatcacg agaaaaagca gccaaggatt ataaccagaa attgaaggag aaatttcagc
2041 attatcctca tataaaacgt atagctcgtc atcgacatct accaaaatct atctatagcc
2101 agattcagga acagcgcatc atgaaagaag ctcgtcgacg aaagtatgtt ttgaggcatt
2161 tgactctatt acccttttct gacttctgct ctcatctcac caaaaacaaa gttaactgcc
2221 attcaaggga gtagtttatg tgctattatt taatagtatg ttagtgatgt gtttgaagac
2281 ttctacagaa ggccttttct tttttctttt tttttttttt tgagacggag tctcgctctg
2341 gagtgcagtg gcacaatctt ggttcactgc aagctccgcc tcccgggttc atgccattct
2401 cctgtctcag cctcctgagt agctaggact acaggcacgc gccaccatgc gcggctaatt
2461 ttttgtattt ttagtagaga cagggtttca ccatgttagc caagatggtc tcaatctcct
2521 gacctcgtga tcgcctgcct cggcctccca aagtgctggg attacaggtg tgagccacca
2581 tgccccgccc agaaggccat ttctttttct ttttcccaaa aaagggaaac agtgactatc
2641 tgagaatggg agaacttcca ttacctgttt ttgagaatat gtttaaagga caaacgatga
2701 aaatgagtta ccaaaataag aaaacacttg ctcatattaa aaaattattg taaaaaatgt
2761 tttaaaaaat aatttctgat gtagctggaa ttaagagatt ttgtgtattt tccaagttaa
2821 agaattaatc tatagtagag ctcttttctt aagtaaaaag tgttctgata tactttatta
2881 taacatgaca tctatcattt tggatataga gcagagctac taccaccacc accatttccc
2941 gtgaaatatt cttctctttg aaatacttga agtcatgcat gaaattctaa gagctcttta
3001 tttttcaatt agaatataca aatggctctt ttttttctgt ctttgggtag atgttgcagt
3061 agaatcactt ttagaaattt tattaactgt ggaaggtttt taaacttagt aaaggaccct
3121 attaggtaaa tatgataaga agcaattaaa taagtaaagt tgatttcttg gtactagctt
3181 ccttttacct attgtcatcg tgaaaatatt tttttaaata ggtgtttttc tagtgaaaga
3241 aaatgctttg atttttctga gaaagttttc tttaagatga gttcccataa cttgcttata
3301 ttttgtatat tttatttcta gggaagtgaa tcgtattaaa cacagcaagc ctggatctgt
3361 gccacttgtg tcagagaaga agaaacacgt agtggcagtt gtaaaataat tggtattcct
3421 aacaatcctg atgtataatt atttgttact tttgatttga gaactctaca aataaaagtg
3481 ctgggactag attaattgca aacaaaaaaa aaaaaaaaa
//