LOCUS BC035162 5104 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens ATPase, class I, type 8B, member 3, mRNA (cDNA clone
MGC:43311 IMAGE:5265541), complete cds.
ACCESSION BC035162
VERSION BC035162.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5104)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5104)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC035162.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: m Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55743078.
FEATURES Location/Qualifiers
source 1..5104
/db_xref="H-InvDB:HIT000051339"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43311 IMAGE:5265541"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..5104
/gene="ATP8B3"
/gene_synonym="ATPIK"
/db_xref="GeneID:148229"
/db_xref="HGNC:HGNC:13535"
/db_xref="MIM:605866"
CDS 235..4137
/gene="ATP8B3"
/gene_synonym="ATPIK"
/codon_start=1
/product="ATPase, class I, type 8B, member 3"
/protein_id="AAH35162.3"
/db_xref="GeneID:148229"
/db_xref="HGNC:HGNC:13535"
/db_xref="MIM:605866"
/translation="MGTGPAQTPRSTRAGPEPSPAPPGPGDTGDSDVTQEGSGPAGIR
GGETVIRAGMGDSPGRGAPERRHKAQPGRARKYEWRPEGPTSMGSLGQREDLQDEDRN
SAFTWKVQANNRAYNGQFKEKVILCWQRKKYKTNVIRTAKYNFYSFLPLNLYEQFHRV
SNLFFLIIIILQSIPDISTLPWFSLSTPMVCLLFIRATRDLVDDMGRHKSDRAINNRP
CQILMGKSFKQKKWQDLCVGDVVCLRKDNIVPADMLLLASTEPSSLCYVETVDIDGET
NLKFRQALMVTHKELATIKKMASFQGTVTCEAPNSRMHHFVGCLEWNDKKYSLDIGNL
LLRGCRIRNTDTCYGLVIYAGFDTKIMKNCGKIHLKRTKLDLLMNKLVVVIFISVVLV
CLVLAFGFGFSVKEFKDHHYYLSGVHGSSVAAESFFVFWSFLILLSVTIPMSMFILSE
FIYLGNSVFIDWDVQMYYKPQDVPAKARSTSLNDHLGQVEYIFSDKTGTLTQNILTFN
KCCISGRVYGPDSEATTRPKENPYLWNKFADGKLLFHNAALLHLVRTNGDEAVREFWR
LLAICHTVMVRESPRERPDQLLYQAASPDEGALVTAARNFGYVFLSRTQDTVTIMELG
EERVYQVLAIMDFNSTRKRMSVLVRKPEGAICLYTKGADTVIFERLHRRGAMEFATEE
ALAAFAQETLRTLCLAYREVAEDIYEDWQQRHQEASLLLQNRAQALQQLLGATAIEDR
LQDGVPETIKCLKKSNIKIWVLTGDKQETAVNIGFACELLSENMLILEEKEISRILET
YWENSNNLLTRESLSQVKLALVINGDFLDKLLVSLRKEPRALAQNVNMDEAWQELGQS
RRDFLYARRLSLLCRRFGLPLAAPPAQDSRARRSSEVLQERAFVDLASKCQAVICCRV
TPKQKALIVALVKKYHQVVTLAIGDGANDINMIKTADVGVGLAGQEGMQAVQNSDFVL
GQFCFLQRLLLVHGRWSYVRICKFLRYFFYKSMASMMVQVWFACYNGFTGQPLYEGWF
LALFNLLYSTLPVLYIGLFEQDVSAEQSLEKPELYVVGQKDELFNYWVFVQAIAHGVT
TSLVNFFMTLWISRDTAGPASFSDHQSFAVVVALSCLLSITMEVILIIKYWTALCVAT
ILLSLGFYAIMTTTTQSFWLFRVSPTTFPFLYADLSVMSSPSILLVVLLSVSINTFPV
LALRVIFPALKELRAKEEKVEEGPSEEIFTMEPLPHVHRESRARRSSYAFSHREGYAN
LITQGTILRRGPGVSSDIASESLDPSDEEAASSPKESQ"
BASE COUNT 1129 a 1566 c 1429 g 980 t
ORIGIN
1 agggccgttg gcaccgggct aacggttcca ccacgtccgc cgccctggac gcccgcggcc
61 tgcccccccc tgcctctcct gcgccgatac acttcgagtg gattctggcc atttgagcat
121 tctctccaac tctccaatcc ccagtctgcc cccacggggg tctcccccac ctctcccccg
181 tcccacagcc taaacccctc ttcgccctga acctcccttt tcctcatgcg gtgaatgggc
241 actggccccg ctcagactcc caggagcacc agagctggcc ctgagccaag ccctgcccca
301 ccaggacctg gggacacggg tgactcagac gtgactcagg aaggctcagg tcctgctggc
361 atccgcggag gtgagacggt gatcagagct gggatgggag actccccagg cagaggggca
421 cccgagagga ggcacaaggc ccagcctggc cgggctagga agtatgaatg gagaccagaa
481 ggccccacca gcatgggcag cctcggccag agagaagatc tccaagatga ggacaggaac
541 tcagcattca cctggaaggt ccaggccaac aaccgtgcct acaacgggca gttcaaggag
601 aaggtgatcc tgtgctggca aaggaagaaa tacaagacca atgtcatccg cacggccaag
661 tacaacttct actcgttcct gccgctgaac ctgtacgagc agttccaccg cgtgtccaac
721 ctgttcttcc tcatcatcat catcctgcag agcattcccg acatctccac gctgccctgg
781 ttctcgctca gtacccctat ggtctgcctc ctcttcatcc gtgccacccg ggacctggtg
841 gacgacatgg ggagacacaa gagtgacaga gccatcaaca acagaccctg ccagattctg
901 atggggaaga gcttcaagca gaagaaatgg caggatctgt gcgtggggga tgtggtctgt
961 ctccgcaagg acaacatcgt cccagccgac atgctcttgc tggccagcac ggagcccagc
1021 agcctgtgct atgtggagac ggtggacatt gacggggaga ccaacttgaa gttcagacag
1081 gccctgatgg tcacccacaa agaactggcc actataaaga agatggcgtc ctttcaaggc
1141 acagtgacgt gtgaggcgcc taacagtcgg atgcaccact tcgtggggtg cctggaatgg
1201 aatgacaaga aatactccct ggacattggc aacctcctcc tccgaggctg caggattcgc
1261 aacacagaca cctgctatgg actggtcatt tatgctggtt ttgacacaaa aattatgaag
1321 aactgtggca agatccattt gaagagaacc aagctggacc tcctgatgaa caagctggtg
1381 gttgtgatct tcatctccgt ggtgcttgtc tgcctggtgt tggccttcgg cttcggtttc
1441 tcagtcaaag aattcaaaga ccaccactac tacctctcgg gggtgcatgg gagcagcgtg
1501 gccgcagagt ccttcttcgt cttctggagc ttcctcatcc tgctcagcgt caccatcccg
1561 atgtccatgt tcatcctgtc cgagttcatc tacctgggga acagcgtctt catcgactgg
1621 gacgtgcaga tgtactacaa gccgcaggac gtgcctgcca aggcccgcag caccagcctc
1681 aacgaccacc tgggccaggt ggaatacatc ttctcggaca agacgggcac gctcacgcag
1741 aacatcttga ccttcaacaa gtgctgcatc agcggccgcg tctatgggcc ggattcagag
1801 gccacgaccc gacctaagga gaacccctac ctctggaaca agttcgccga cgggaagctg
1861 ctcttccaca atgcggccct gctgcacctc gtgcggacca acggggacga ggccgtgcgg
1921 gagttctggc gcctgctggc catctgccac acggtgatgg tgcgggagag cccccgtgag
1981 cgcccagacc agctgttgta ccaggcggcc tcccccgacg agggggcgct ggtcaccgca
2041 gcccggaact tcggctacgt gttcctgtcc cgcacccagg acaccgtcac gatcatggag
2101 ctgggggagg aacgggtcta ccaggtcctg gccataatgg acttcaacag cacgcgcaaa
2161 cggatgtcgg tgctggttcg aaagccagag ggcgccatct gcctgtacac caagggcgcc
2221 gacacggtca tcttcgaacg cttgcacagg aggggggcaa tggaatttgc cacagaggag
2281 gccttggctg cctttgccca ggagaccctg cggacactgt gcctggccta cagggaggtg
2341 gctgaggaca tttacgagga ctggcagcag cgccaccagg aggccagcct cctgctgcag
2401 aaccgggcac aggccctgca acagctgctg ggagccacag ccatcgagga cagactccag
2461 gacggtgtcc ctgaaaccat caaatgtctc aagaagagca acatcaaaat atgggtgctc
2521 accggggaca agcaggaaac ggctgtgaac atcggcttcg cctgcgagct gctgtcagag
2581 aatatgctca ttctggagga gaaggagatt agccgcatcc tggagaccta ctgggaaaac
2641 agtaacaacc ttctaaccag ggagtccctg tcgcaggtca agctggcctt ggtcattaac
2701 ggagacttcc tggacaaact gctggtgtcc ctgcggaagg agccgcgcgc cctggcgcag
2761 aacgtgaaca tggacgaggc gtggcaggag ctcggccagt ccaggaggga tttcctctac
2821 gccaggcgcc tgtccctgct gtgccggagg ttcgggctcc cgctggctgc accgccagcc
2881 caggactcca gagcccgccg tagctccgag gtgctgcagg agcgcgcctt cgtggacctg
2941 gcgtccaagt gccaggcggt catctgctgc cgcgtgacgc ccaagcagaa ggccctgatc
3001 gtggccctgg tcaagaagta ccaccaggtg gtgaccctgg ccatcgggga cggtgccaac
3061 gacatcaaca tgatcaagac cgcggacgtg ggcgtggggc tggcgggcca ggagggcatg
3121 caggcagttc agaacagcga cttcgtgctc ggccagttct gcttcctgca gcgcctcctg
3181 ctggtgcacg gccgctggtc ctacgtgcgg atctgcaagt tcctgcgcta cttcttctac
3241 aagagcatgg ccagcatgat ggtgcaggtc tggtttgcct gctacaacgg cttcaccggc
3301 cagcccctgt atgaaggatg gttcctggct cttttcaacc tcctgtacag caccctgcca
3361 gttctctaca ttgggctctt tgagcaggac gtgagcgcag agcagagcct ggagaagccg
3421 gagctgtacg tggtggggca gaaggacgag ctcttcaact actgggtctt cgtccaagcc
3481 atcgcccatg gtgtgaccac ctctctggtc aacttcttca tgacactgtg gatcagccgc
3541 gacacggcgg gacccgccag cttcagcgac caccagtcct ttgcggtcgt ggtggccctg
3601 tcttgcctgc tgtccatcac catggaggtc attcttatca tcaagtactg gaccgccctg
3661 tgcgtggcga ccatcctcct cagccttggt ttctacgcca tcatgactac caccacccag
3721 agcttctggc tcttcagagt atcccccacg accttcccgt ttctgtatgc cgacctcagc
3781 gtgatgtcct ctccctccat cctgctggtg gtcctgctga gtgtgtccat aaacaccttc
3841 cctgtcctgg ccctccgagt catcttccca gccctcaagg agctacgtgc caaggaggag
3901 aaggtggagg agggccccag cgaggagatt ttcaccatgg agcccttgcc tcatgtacac
3961 cgggagtctc gtgcccgccg ttccagctat gctttctccc accgtgaggg atatgcaaac
4021 ctcatcactc agggcacaat tctgcggagg ggaccagggg tcagcagtga catagcatct
4081 gaatccctag acccatctga tgaagaggca gcttcgagcc caaaagagtc acagtgacac
4141 ctcaggaaga tgtccttcct ggggaagaag aagcaccagc cacaggggca ggtgtcctcc
4201 caggaagtac agctcccccc tacacctagc tcatcatttt ctatggatag acaatccgct
4261 cttcatccag aaaaccaacc tgccctcccc aaatatgtgc tcaccagcag caacaggcta
4321 tctgagtctt tccaagagca attgccaagg gcacaggaga ggtcattgtc acccaagcag
4381 aggccacctt ctcctgagaa gttgctgttg accaaggaga ggtcacattc ttttcaggag
4441 aaatcactgt tgcacagaga aagccagctg tcgtcatttg agagccagcc acagcctctg
4501 gggagccagt catttctttc aggccagctg acgttggaga gccagccaga ctcctcggag
4561 gagaagtcag catttttgaa gccctccaca ccgttccgga agagctggca aaaggagcct
4621 cacaccccca aggaggggac ggtgccactt ccagacaaga cccacaaatc tcaggtggag
4681 actctgccac caagtctgga agaatcgtcc acgtccacga gcgagcagcc tatggaggtg
4741 gagctgtggc ccgcggagaa gcagtcatca tcatccatgg agtggctgct ggtgccaggg
4801 gaggagcagc tatccttgcc cccagaggag cagtcattgc cctctgcgga ggggaccagg
4861 gttcagcagt gacgtagcat ctgaatccct agacccatct gatgaagagg catcttcgag
4921 cccaaaggag tcacgctggc atatcaggaa gatgtccttc ctgggaagaa gaagctccag
4981 ccagttctgc tgcaagtcaa ccagcatgca gggggccttc ctctaaagac aaggactcca
5041 catgcttttc tttttctaat aaaccagggt ccatctgacc ccagcgctaa aaaaaaaaaa
5101 aaaa
//