LOCUS BC035118 2791 bp mRNA linear HUM 11-AUG-2005
DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member
12, mRNA (cDNA clone IMAGE:5263281), complete cds.
ACCESSION BC035118
VERSION BC035118.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2791)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2791)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: h Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749432
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2791
/db_xref="H-InvDB:HIT000093704"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5263281"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2791
/gene="SLC39A12"
/gene_synonym="bA570F3.1"
/gene_synonym="FLJ30499"
/db_xref="GeneID:221074"
CDS 1345..2274
/gene="SLC39A12"
/gene_synonym="bA570F3.1"
/gene_synonym="FLJ30499"
/codon_start=1
/product="SLC39A12 protein"
/protein_id="AAH35118.1"
/db_xref="GeneID:221074"
/translation="MLGTALVLFHSCEENYRLILQLFVGLAVGTLSGDALLHLIPQVL
GLHKQEAPEFGHFHESKGHIWKLMGLIGGIHGFFLIEKCFILLVSPNDKGLSLVNGHV
GHSHHLALNSELSDQAGRGKSASTIQLKSPEDSQAAEMPIGSMTASNRKCKAISLLAI
MILVGDSLHNFADGLAIGAAFSSSSESGVTTTIAILCHEIPHEMGDFAVLLSSGLSMK
TAILMNFISSLTAFMGLYIGLSVSADPCVQDWIFTVTAGMFLYLSLVEMLPEMTHVQT
QRPWMMFLLQNFGLILGWLSLLLLAIYEQNIKI"
BASE COUNT 857 a 592 c 548 g 794 t
ORIGIN
1 agcggccgtg cacagtcaaa gaattttaaa aacagggaac tttgtaactg tgaaatactc
61 tccaggattt aaaaggctgt ggagctccag ataaagaatc gtttatcttt cttctgaaga
121 aattcctttg gttacaagtt taccccataa acggcaacac actcacctcc atccaagaca
181 gactcaaggt ggaggaagcg tggaaatgtg cttccggaca aagctctcag tatcctgggt
241 gccattgttt cttctactca gccgtgtttt ttctactgag acagacaaac cctcagccca
301 ggacagcaga agccgtggga gttcaggcca accggcagac ctgctacagg ttctctctgc
361 tggtgaccac ccaccccaca accactcaag aagcctcatc aaaacattgt tggagaaaac
421 tgggtgccca cggaggagaa acggaatgca aggagattgc aatctgtgct ttgaaccaga
481 tgcactatta ctaatagctg gaggaaattt tgaagatcag cttagagaag aagtggtcca
541 gagagtttct cttctccttc tctattacat tattcatcag gaagagatct gttcttcaaa
601 gctcaacatg agtaataaag agtataaatt ttacctacac agcctactga gcctcaggca
661 ggatgaagat tcctctttcc tttcacagaa tgagacagaa gatatcttgg ctttcaccag
721 gcagtacttt gacacttctc aaagccagtg tatggaaacc aaaacgctgc agaaaaaatc
781 tggaatagtg agcagtgaag gtgctaatga aagtacgctt cctcagttgg cagccatgat
841 cattactttg tccctccagg gtgtttgtct gggacaagga aacttgcctt ccccagacta
901 ctttacagaa tatattttca gttccttgaa tcgtacgaat acactccgcc tgtcagaact
961 agaccaactc ctcaacactc tcaccagaag tacttgtatc aaaaatgaga aaatccatca
1021 atttcaaagg aaacaaaaca acataataac ccatgatcag gactattcta atttctcttc
1081 atccatggaa aaagagtctg aggatggtcc aatttcctgg gatcagacct gcttctctgc
1141 taggcagctg gtggagatat ttctacagaa gggcctctca ctcatttcta aggaggactt
1201 taagcaaatg agtccaggga tcatccagca gctcctcagc tgctcctgcc acttaccaag
1261 gaccaacaag caaagctgcc acctaccact ctggagaaat acggctacag cacggtggct
1321 gtcacccttc tcacactggg ctacatgctg gggacagcgc tggtcctttt ccatagctgt
1381 gaggagaact acaggcttat cttacagctg tttgtgggct tggccgtcgg gacactgtct
1441 ggggacgctc tgctccacct tatccctcag gttcttggtt tacataagca ggaagcccca
1501 gaatttgggc atttccatga aagcaaaggt catatttgga aactgatggg attaattgga
1561 ggcatccatg gatttttctt gatagaaaaa tgttttattc ttcttgtatc accaaatgac
1621 aagggcctgt cattggttaa tgggcacgtg ggtcattccc accatcttgc actcaactct
1681 gaattaagtg accaggcagg cagaggcaaa tctgcttcaa ctatccagtt gaaaagccca
1741 gaagattcac aggcagctga aatgcctata ggcagtatga cagcctccaa cagaaaatgt
1801 aaagccatta gcttgttagc aatcatgatt ctggttgggg acagcctgca taattttgca
1861 gatggcctag ccataggagc agccttctca tcatcatccg agtcaggagt gaccactacg
1921 attgctatct tgtgtcatga aatcccacat gaaatgggag actttgccgt gctcttaagc
1981 tctggacttt ctatgaagac tgccatcctg atgaatttta taagctccct aactgccttc
2041 atgggattat acattggcct ttccgtgtca gctgatccat gtgttcaaga ctggatcttc
2101 acagtcactg ctgggatgtt cttatattta tccttggttg aaatgcttcc tgaaatgact
2161 catgttcaaa cacaacgacc ctggatgatg tttctcctgc aaaactttgg attgatccta
2221 ggttggcttt ctctcctgct cttggctata tatgagcaaa atattaaaat ataagtgagg
2281 atcttcaaca tctttcaaaa atgcatttat atagtcttac tttgtttctt tcattgcact
2341 atataatgat ttttaaatta agaatttttt atcttaggca aagtgtgtct ctttcaattc
2401 attaacttat taattttata atgcagtttt atttttggaa acatataaat atcagactgt
2461 acttaattga aattttgtct ttggtttcca acaccatgat gaagctcttg ctttttaaaa
2521 agtagttagt aaattctgca tgaattttag taaactttaa aaaatagatt ttttccctaa
2581 gaaagaatgt ttgtagaatt taaagtggac agatgcctgt tggggtaaaa tcaactgcaa
2641 ctttttgatg ttaatttttt tccctgtgca attataaact ataagcaagt taagtgacaa
2701 gcaaatgtaa taaagactag ttttaataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2761 aaaaaaaaaa aaaagaaaaa aaaaaaaaaa a
//