LOCUS BC035054 1703 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens RAB28, member RAS oncogene family, mRNA (cDNA clone
MGC:41862 IMAGE:5263482), complete cds.
ACCESSION BC035054
VERSION BC035054.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1703)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1703)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC035054.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: h Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758993.
FEATURES Location/Qualifiers
source 1..1703
/db_xref="H-InvDB:HIT000051318"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41862 IMAGE:5263482"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1703
/gene="RAB28"
/db_xref="GeneID:9364"
/db_xref="HGNC:HGNC:9768"
CDS 189..854
/gene="RAB28"
/codon_start=1
/product="RAB28, member RAS oncogene family"
/protein_id="AAH35054.1"
/db_xref="GeneID:9364"
/db_xref="HGNC:HGNC:9768"
/translation="MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQT
IGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFE
NLEDWYTVVKKVSEESETQPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSA
KTGDSVFLCFQKVAAEILGIKLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMC
AVQ"
BASE COUNT 484 a 339 c 368 g 512 t
ORIGIN
1 agggggcggg gaggtgggca agatggcgct tgccgagtga ttctcctcga atacctcctg
61 ccggcgcgga gacaccgggg cgggggtcct gccgcaacta cctcccttcc tcctctcccc
121 cgcccccgga gccttcatcc ttcccttccc cccccacctc gaggggcggg cctggttccc
181 gggacaccat gtcggactct gaggaggaga gtcaggaccg gcaactgaaa atcgtcgtgc
241 tgggggacgg cgcctccggg aagacctcct taactacgtg ttttgctcaa gaaacttttg
301 ggaaacagta caaacaaact ataggactgg atttcttttt gagaaggata acattgccag
361 gaaacttgaa tgttaccctt caaatttggg atataggagg gcagacaata ggaggcaaaa
421 tgttggataa atatatctat ggagcacagg gagtcctctt ggtatatgat attacaaatt
481 atcaaagctt tgagaattta gaagattggt atactgtggt gaagaaagtg agcgaggagt
541 cagaaactca gccactggtt gccttggtag gcaataaaat tgatttggag catatgcgaa
601 caataaaacc tgaaaaacac ttacggtttt gccaggaaaa tggttttagt agccactttg
661 tctcagccaa gacaggagac tctgtcttcc tgtgctttca gaaagttgct gctgaaatcc
721 ttgggatcaa attaaacaaa gcagaaatag aacagtcaca gagggtggtg aaggcagata
781 ttgtaaacta caaccaggaa cctatgtcaa ggactgttaa ccctcctaga agctctatgt
841 gtgcagttca gtgagcgcat ttttcttttg tgttgatagt tctggctgcc cttcacctct
901 gggtgggccc gaggacttct aggaacttgt tttatcagtg accatctctg tagttcagtt
961 aacactttac tcccaacttg cttcatcatt gctattgcct cacagtggca ggcagctcct
1021 tggatttgaa agaattcaac tttgggacca cacactttga attcaaaatg gaaaacccat
1081 tccctggaat tagactgctt cattgcaaaa gaatgatgtt gtttctttgt atgtccttgc
1141 ttcttttttc attgatgtaa atttttttaa cttaatatga aaactctcca agtcttgatc
1201 atcagccagg attttgccac agcaatttca ttctcttatc ggaacttgta tgtgtcaaag
1261 tatacttcag agtgcaaaca ttaagcaagt aatatatttt acctacagat acttatgaag
1321 acattctttc gctatcgtga gtaaaagtat ataaagctgt ttctaactga aaatgcttga
1381 aataagcctg taatagaaat attttttcat tttttaaaaa agggcctaaa ttgtttatat
1441 tgtagtttgt aactcacaaa gtaatatttg atattgtatt tttattactg tatcgttgtc
1501 gttatgtatt gtgtaatact caggtttgaa ggctttctga attctgataa atgttcagct
1561 gatgctccac gtggaatttc tcttgcaaac tgcataagag tactcccgag aatgagttat
1621 gacattgtgg atcagactgt acctgatgtt cagatgtttt tctttcacaa ataaacttat
1681 ttaaattaaa aaaaaaaaaa aaa
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