LOCUS BC035041 4358 bp mRNA linear HTC 28-JUL-2005
DEFINITION Homo sapiens nucleolar protein 8, mRNA (cDNA clone IMAGE:4829474),
with apparent retained intron.
ACCESSION BC035041
VERSION BC035041.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4358)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4358)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: c Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4358
/db_xref="H-InvDB:HIT000093652"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4829474"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1564 a 778 c 999 g 1017 t
ORIGIN
1 agcgggaggg agaaggctgg ggtgggtagg ttgggggtgg agacaattag gaagaggtag
61 gctagctctt tttatctttt agtgcgttac atcctgtttc tgtcagactt tgttaaagac
121 agtaaatgaa tgtatgagtg agtcaaggaa aaacatctaa aaacatgaat acataaaatt
181 aagagggata gagtgtaata ttatggcgat ttggaggaaa aaaactctgt ctgtacctgt
241 gtctatatgg gtatggggtt gctgttccaa agtgcattca tgaaagatgt ggatgtaggg
301 cttgggcaaa acctcgaaga ctaaaatttg gaagtaatac aataggaagt gaaatacaga
361 tccaggagac ggatttgata cagaaggttc agaggaagta gttgttttgt tagattttag
421 aagaactaag ggaaagaact cttctctgta tacagaaaat tacttttccc actgaaacac
481 acccaagtat atgcccagcc ttcatgaaag tgaacagaga aacgaagcgc ctttatgtgg
541 gtggccttag ccaggacatt tctgaggcag acctacaaaa tcagttcagc agatttggag
601 aagtttcgga tgtggagatc atcacacgga aagatgacca aggaaaccca cagaaagttt
661 ttgcatatat caacatcagt gtagcagaag cggacctgaa aaaatccatt tttcacgtta
721 tccagaggga cagcagtgat gaagagaatt ccagtatcgt ataactcagc aggtttaggt
781 ccattccatt tggcatcagc agacatggta gcactttact ggtatgtctg ttttaaataa
841 aacaaaatgg aaaggtggaa cattacaaat tcaactagca aaagaaagct ttctgcacag
901 attggcccaa gagagagaag cagcaaaagc taagaaagaa gaatcaacaa caggtaacgc
961 caacttgtta gaaaagacag gaggagtgga tttccatatg aaagctgtgc cagggacaga
1021 agtgccaggg cataagaatt gggttgtgag caaatttgga agagtcttac ctgttcttca
1081 ccttaaaaat caacataaac gtaaaatcat caaatatgat ccctcaaaat actgccacaa
1141 cctgaagaag ataggggagg atttctcaaa caccattcct atatccagcc tgacttggga
1201 attagaagga gggaatgacc ctatgagtaa gaaacggcga ggagagttct ctgactttca
1261 tggccctccc aagaagataa taaaagtgca gaaggatgag agttccactg ggtctctggc
1321 catgagtaca aggcccagga gggtaataga gagaccaccc ttaacacagc aacaggctgc
1381 acaaaaaaga acttgtgatt ccattactcc ttctaaatca tctcctgtac ctgtttctga
1441 tactcagaaa cttaaaaatc taccttttaa gacttctggc ttggaaactg ccaagaagag
1501 aaacagcatt tctgatgatg atactgattc tgaagatgaa ttgagaatga tgattgcgaa
1561 agaggaaaac ttacagagaa ctacacaacc ctcaataaat gaatctgaaa gtgatccttt
1621 tgaagttgta agggatgatt tcaaatcagg cgttcacaaa ctgcattctt taataggttt
1681 aggtatcaaa aatcgtgtct cttgccatga tagtgatgat gatattatga gaaatgatcg
1741 tgagtatgac tcaggagata cagatgaaat tattgcgatg aaaaaaaatg ttgctaaggt
1801 caaaaacagt acagaatttt cacaaatgga aaaatctacg aagaaaactt ctttcaaaaa
1861 tagagaaaac tgtgagcttt ctgatcactg tattaaacta caaaaaagaa aaagcaatgt
1921 agagtcagcc ctcagtcatg gattaaagtc tcttaatcgt aaatctccct ctcactccag
1981 tagcagtgaa gatgctgatt ctgcatcaga attagctgac tctgaaggag gtgaggagta
2041 taatgccatg atgaaaaact gccttcgtgt gaatctcact ttagctgatt tggaacaatt
2101 ggctggcagt gatctgaagg ttccaaatga agatactaag agtgatggac cagaaaccac
2161 cacccaatgc aagtttgaca gaggctccaa gagccccaag actcccactg gcctccgcag
2221 aggccgacag tgtattcgtc ctgcggagat tgtggcttcc ctgttagaag gagaggagaa
2281 cacctgtggc aaacagaaac caaaggaaaa caatttaaag ccaaaatttc aggctttcaa
2341 gggagtaggc tgtctatatg aaaaggagtc aatgaaaaaa tccttgaaag acagtgttgc
2401 ctctaacaat aaagatcaga attccatgaa acatgaggat cccagtatca tatccatgga
2461 agatgggtcc ccatatgtta atggctcatt aggtgaagtg actccatgcc aacatgcaaa
2521 gaaggcgaat ggcccaaact atattcagcc tcaaaaaaga cagaccactt ttgaaagcca
2581 ggatcgcaag gcagtgtccc ctagcagttc tgaaaagaga agtaagaatc ctatttctag
2641 gccattagaa ggtaagaagt ccttaagtct tagtgcaaag actcacaaca taggctttga
2701 caaagacagc tgccatagta ccacaaagac agaagcttca caggaagagc ggtctgattc
2761 aagcggcctc acatctctca agaaatcacc aaaggtctca tccaaggaca ctcgggaaat
2821 caaaactgat ttctcacttt ctattagtaa ttcgtcagat gtgagtgcta aagataagca
2881 tgctgaagac aatgagaagc gtttggcagc cttggaagcg aggcaaaaag caaaagaagt
2941 gcagaagaag ctggtgcata atgctctggc aaatttggat ggtcatccag aggataagcc
3001 aacgcacatc atcttcggtt ctgacagtga atgtgaaaca gaggagacat cgactcagga
3061 gcagagccat ccaggagagg aatgggtgaa agagtctatg ggtaaaacat cagggaagct
3121 gtttgatagc agtgatgatg acgaatctga ttctgaagat gacagtaata ggttcaaaat
3181 taaacctcag tttgagggca gagctggaca gaagctcatg gatttacagt cgcactttgg
3241 caccgatgac agattccgca tggactctcg atttctagaa actgacagtg aagaggaaca
3301 ggaagaggta aatgaaaaga aaactgctga ggaagaagag cttgctgaag aaaaaaagaa
3361 agccctgaat gttgtacaaa gtgttttgca aatcaactta agcaattcta caaacagagg
3421 atcagtagct gctaagaaat ttaaggacat catacattat gatccaacga agcaagacca
3481 tgccacttac gaaagaaaaa gagatgataa accaaaagaa agtaaagcaa aacgaaaaaa
3541 gaaaagggag gaagctgaga aactacctga ggtgtctaaa gaaatgtatt ataatattgc
3601 tatggatctg aaagaaatat tccaaactac aaaatatacc agtgaaaagg aagagggcac
3661 accctggaat gaggactgtg gtaaagagaa acctgaggaa atccaggacc ctgcagctct
3721 gaccagtgac gctgagcagc ccagcgggtt cacgttctct ttttttgatt cagacactaa
3781 agacataaag gaagagacct acagagttga aacagtgaaa cctggaaaga ttgtctggca
3841 ggaagaccct cgtttacaag acagcagttc agaagaggaa gatgttactg aagaaacaga
3901 tcacagaaac tccagtcctg gagaagcatc attacttgag aaagagacca ctagattttt
3961 ctttttctct aagaatgatg aacgacttca aggttctgac ttattctgga gaggagtagg
4021 aagtaatatg agcaggaact cttgggaggc cagaacaacc aacctgcgta tggattgtcg
4081 aaagaaacat aaagacgcaa aaaggaaaat gaaaccaaaa taataaatgt cagctggttt
4141 tgatactgaa tgtgaacaag gctcacctaa ggaaactgac ccagaaaaca gttttagctg
4201 acaaagaaga aatttcagag tgaaggaatt ttaaaaatct ggctgacgga atatcattct
4261 ggttgccatc tttttctgtg gaactcctct gcatttcttc ctaagtaatt acttcaaaaa
4321 ttaaattcaa cttcttataa aggaaaaaaa aaaaaaaa
//