LOCUS BC035005 3970 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens FtsJ methyltransferase domain containing 1, mRNA (cDNA clone MGC:33269 IMAGE:5267637), complete cds. ACCESSION BC035005 VERSION BC035005.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3970) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3970) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC035005.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: l Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34222354. FEATURES Location/Qualifiers source 1..3970 /db_xref="H-InvDB:HIT000051295" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33269 IMAGE:5267637" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3970 /gene="FTSJD1" /gene_synonym="AFT" /db_xref="GeneID:55783" /db_xref="HGNC:HGNC:25635" CDS 338..2650 /gene="FTSJD1" /gene_synonym="AFT" /codon_start=1 /product="FtsJ methyltransferase domain containing 1" /protein_id="AAH35005.1" /db_xref="GeneID:55783" /db_xref="HGNC:HGNC:25635" /translation="MSKCRKTPVQQLASPASFSPDILADIFELFAKNFSYGKPLNNEW QLPDPSEIFTCDHTELNAFLDLKNSLNEVKNLLSDKKLDEWHEHTAFTNKAGKIISHV RKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKS HRYPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTG LQNFISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKM FTMFEHCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYKGREAIHPLLSKMT LNFGTEMKRKALFPHHVIPDSFLKRHEECCVFFHKYQLETISENIRLFECMGKAEQEK LNNLRDCAIQYFMQKFQLKHLSRNNWLVKKSSIGCSTNTKWFGQRNKYFKTYNERKML EALSWKDKVAKGYFNSWAEEHGVYHPGQSSILEGTASNLECHLWHILEGKKLPKVKCS PFCNGEILKTLNEAIEKSLGGAFNLDSKFRPKQQYSCSCHVFSEELIFSELCSLTECL QDEQVVVPSNQIKCLLVGFSTLRNIKMHIPLEVRLLESAELTTFSCSLLHDGDPTYQR LFLDCLLHSLRELHTGDVMILPVLSCFTRFMAGLIFVLHSCFRFITFVCPTSSDPLRT CAVLLCVGYQDLPNPVFRYLQSVNELLSTLLNSDSPQQVLQFVPMEVLLKGALLDFLW DLNAAIAKRHLHFIIQREREEIINSLQLQN" BASE COUNT 1123 a 735 c 818 g 1294 t ORIGIN 1 gggcggagcc aaagaatgct ccgcctgcgc gcgccgcttc cgttgccata gtggccgggg 61 gcgggaggct ggcgcctccc agcttctgta ctccgcgaag caaaacctag ggagctgagg 121 cctaggcgag gcgagagtcg ccggcgtgcg taacgttggc gcacgtgact ccggcccggc 181 ctacagggcg cgtgcgcagt gggacttgag tgcctcctgg tccctgtctg ccggcattcg 241 cggctgcggg gcccggagtt gctggtagga ggagttggcg gaagcacttg gaactccttt 301 ataagtgtca gctgtgagat tttaatttga tttgaaaatg agtaagtgca gaaagacacc 361 agttcagcag ctagcaagtc ccgcgtcatt cagcccagat attcttgctg acatttttga 421 actctttgcc aagaactttt cttatggcaa gccacttaat aatgagtggc agttaccaga 481 tcccagtgag attttcacct gtgaccacac tgaacttaat gcatttcttg atttgaagaa 541 ctccctaaat gaagtaaaaa acctactgag tgataagaaa ctggatgagt ggcatgagca 601 cactgctttc actaataaag cggggaaaat catttctcat gttagaaaat ctgtgaatgc 661 tgaactttgt actcaagcat ggtgtaagtt ccatgagatt ttgtgcagct ttccacttat 721 tccacaggaa gcttttcaga atggaaaact gaattctcta cacctttgtg aagctccagg 781 agcttttata gctagtctca accactactt aaaatcccat cggtatcctt gtcattggag 841 ttgggtagcg aatactctga atccatacca tgaagcaaat gacgacctca tgatgattat 901 ggatgaccgg cttattgcaa ataccttgca ctggtggtac tttggtccag ataacactgg 961 tgatatcatg accctgaaat tcttgactgg acttcagaat ttcataagca gcatggctac 1021 tgttcacttg gtcactgcag atgggagttt tgattgccaa ggaaacccag gtgaacaaga 1081 agctttagtt tcttctttgc attactgtga agttgtcact gctctgacca ctcttggaaa 1141 cggtggctct tttgttctaa agatgtttac tatgtttgaa cattgttcca taaacttgat 1201 gtacctgcta aactgttgtt ttgaccaagt ccatgttttc aaacctgcta ctagcaaggc 1261 aggaaactcc gaagtctatg tggtttgcct ccactataag gggagagagg ccatccatcc 1321 tctgttatct aagatgacct tgaattttgg gactgaaatg aaaaggaaag ccctttttcc 1381 ccatcatgtg attcctgatt cttttcttaa gagacatgaa gaatgttgtg tgttctttca 1441 taaatatcag ctagagacta tttctgaaaa cattcgtcta tttgagtgca tgggaaaggc 1501 ggaacaagaa aagctgaata atttaaggga ttgtgctata caatatttta tgcaaaaatt 1561 tcaactgaaa catctttcca gaaataattg gctagtaaaa aaatctagta ttggttgtag 1621 tacaaataca aaatggtttg ggcagaggaa caaatatttt aaaacttata atgaaaggaa 1681 gatgctagaa gccctttcat ggaaagataa agtagccaaa ggatacttta atagttgggc 1741 tgaagaacat ggtgtatatc atcctgggca gagttctatt ttagaaggaa cagcttccaa 1801 tcttgagtgt cacttatggc atattttgga gggaaagaaa ctgccaaagg taaaatgttc 1861 tcctttttgc aatggtgaaa ttttaaaaac tcttaatgaa gcaattgaaa agtcattagg 1921 aggagctttt aatttggatt ccaagtttag gccaaaacag cagtattctt gttcttgtca 1981 tgttttttct gaagaactga tattttccga gttgtgtagc cttactgagt gccttcagga 2041 tgagcaggtt gtagtaccca gcaatcaaat aaagtgcctg ctggtgggct tttcgactct 2101 ccgtaatatc aaaatgcata taccgttgga agttcgactc ctagaatcag ctgaactcac 2161 aacttttagc tgttcattgc ttcatgatgg agatccaact taccagcgtt tatttttgga 2221 ctgccttcta cattcattgc gggagcttca tacaggagat gttatgattt tgcctgtact 2281 ttcttgcttc acaagattta tggctggttt gatctttgta ctccacagtt gttttagatt 2341 catcactttt gtttgtccca catcctctga tcccctgagg acctgcgcag tcctgctatg 2401 tgttggttat caggaccttc caaatccagt tttccgatat ttgcagagtg tgaatgaatt 2461 gttgagcact ttgctcaact ctgactcacc ccagcaggtt ttacagtttg tgccaatgga 2521 ggtactcctt aagggggccc tgcttgattt tttgtgggat ttgaatgctg ccattgctaa 2581 aaggcatttg catttcatta ttcaaagaga gagagaagaa attatcaaca gccttcagtt 2641 acaaaactga acatatgctt tctgagattc aactttatga tttcttataa tttgcccagt 2701 atttgcatcc tgttgctcta ttaatttaaa aaccttttat tttggggaaa ggccaacatt 2761 tgcatcattc aaagtctcat taattctgga aaaccatcca ttctgatctc tagggtatat 2821 acacccacag gcatagagct cttccacgtg gtggaatcta tgcaatgata gatattcaca 2881 ctctaaatat gaggtgtgtg tatgtgtatg ggtggccaca gccatgctta cctatgccat 2941 ttagttggtc ttacttaatc tgcttaagat ttgcatctgt gtacctttgt tcagattagt 3001 tttttttttc cagccgattt cctcttagtg gctaatgctg ttagtgaatt ttccaactaa 3061 tttcctctca ttggttaatg ttgttaatga attgagagag gtaattgagg aaaggaaatg 3121 agtaaatcac tgttcagcaa cactgatttc cgttaacaca tcagttatga atttcaggga 3181 attcatctcg ccagattctt gataacatgc cattcattgc ccttaggtga ttgaccctat 3241 tttcttacat ggctcaaata aaactagtat gctgttgtat gaatctttta ctgaccacac 3301 catccaacta taaaaatata acgggacagc tttaaaccaa agatcatgtt tagaacaatg 3361 aaaaattatt tgttgtatct aatacacgcc tgtattgtga aaagcttcat ttagcaatga 3421 tgtaataatt tttaacttcc aggaaataat ctgtgaatgg aaagattttt taagattttg 3481 agatagtgtt tagtctcatg ttgggaacac atgaatgtga tgaacatagt gaatactaaa 3541 gaaaacgctt cagactttca gaatgatggt tcagaattta aaatttttaa tcttttctaa 3601 tttctttttt tcagtgtgaa aatagcactt taccaaaaga ttagccatga aatggttatt 3661 ttgccagtta catttgattt cttttgtatc tgcaatgtaa tgagttattt tatttcttct 3721 gtatttgcag tgtaatgagt ttttgtggca aagtgtatta agcaattttt cattatcttg 3781 aagttccaca aagtggagaa tatttatatt ctcacatgca ttttaggcac ttttgatatg 3841 tgaaaataga tgtattttct gatgcatttg gttaataaat attaatctga acattttcat 3901 gttctttgct attttgaatt ccattataga ttcatgaata aagtcattac tagagaaaaa 3961 aaaaaaaaaa //