LOCUS BC034990 4464 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens myotubularin related protein 9, mRNA (cDNA clone
MGC:33044 IMAGE:4831337), complete cds.
ACCESSION BC034990
VERSION BC034990.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4464)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4464)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034990.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: d Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33598962.
FEATURES Location/Qualifiers
source 1..4464
/db_xref="H-InvDB:HIT000051286"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33044 IMAGE:4831337"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4464
/gene="MTMR9"
/gene_synonym="DKFZp434K171"
/gene_synonym="LIP-STYX"
/db_xref="GeneID:66036"
/db_xref="HGNC:HGNC:14596"
/db_xref="MIM:606260"
CDS 400..2049
/gene="MTMR9"
/gene_synonym="DKFZp434K171"
/gene_synonym="LIP-STYX"
/codon_start=1
/product="myotubularin related protein 9"
/protein_id="AAH34990.1"
/db_xref="GeneID:66036"
/db_xref="HGNC:HGNC:14596"
/db_xref="MIM:606260"
/translation="MEFAELIKTPRVDNVVLHRPFYPAVEGTLCLTGHHLILSSRQDN
TEELWLLHSNIDAIDKRFVGSLGTIIIKCKDFRIIQLDIPGMEECLNIASSIEALSTL
DSITLMYPFFYRPMFEVIEDGWHSFLPEQEFELYSSATSEWRLSYVNKEFAVCPSYPP
IVTVPKSIDDEALRKVATFRHGGRFPVLSYYHKKNGMVIMRSGQPLTGTNGRRCKEDE
KLINATLRAGKRGYIIDTRSLNVAQQTRAKGGGFEQEAHYPQWRRIHKSIERYHILQE
SLIKLVEACNDQTHNMDRWLSKLEASNWLTHIKEILTTACLAAQCIDREGASILIHGT
EGTDSTLQVTSLAQIILEPRSRTIRGFEALIEREWLQAGHPFQQRCAQSAYCNTKQKW
EAPVFLLFLDCVWQILRQFPCSFEFNENFLIMLFEHAYASQFGTFLGNNESERCKLKL
QQKTMSLWSWVNQPSELSKFTNPLFEANNLVIWPSVAPQSLPLWEGIFLRWNRSSKYL
DEAYEEMVNIIEYNKELQAKVNILRRQLAELETEDGMQESP"
BASE COUNT 1175 a 979 c 1014 g 1296 t
ORIGIN
1 aggagtccct agcggccagg gcgtggaagc ggattctgag gcggctttct cctactgccc
61 tccgcttgcc aacgcgggac ccggagccca acggcagcgg cggtccttgg gcctgtggag
121 aggggttctc tgtggccgag tcctaggcct ggtgaaccgc gcggtgcggg agaggcgctt
181 gggcctcgtc cagccccagc ccctgtctcc ccgcggccgg tgccggcggc tgtaggcctc
241 gccgcgccca cccagcctgg ggcgggccca gcctcaccgc ccggcccgcc ccgccccacg
301 ggccagcccc gcgccgggtg tttccgctac ttccctgcgg cggggtaacc gcctcgcacc
361 taccgggctc ggttccctgg ctccggccgc ggggggagca tggagtttgc ggagctgatt
421 aagaccccgc gggtggacaa tgtggtgctg caccggcctt tctacccggc tgtcgagggc
481 accctgtgcc tgacgggcca ccacttgatc ctgtcctccc ggcaggacaa tacggaggag
541 ctgtggctcc tccattcaaa catcgacgcc atcgacaagc gatttgtagg atcactgggt
601 accatcatca taaaatgtaa agattttcga attattcagt tggatattcc tggaatggag
661 gaatgcttga atatagccag ttccattgag gcattgtcta ctctggactc catcactctg
721 atgtaccctt tcttttaccg tcctatgttt gaagtgatag aagatggctg gcattccttc
781 cttcctgagc aagaatttga actctattct tcagctacca gtgaatggag gctaagctat
841 gtcaataagg aatttgctgt ctgtccctct tacccaccaa ttgtcacagt gcccaaatcc
901 atcgatgatg aagctcttcg gaaggtagct acatttcgac atggagggcg cttcccagta
961 ctaagctatt accacaaaaa aaatgggatg gtaattatgc gaagtggtca gccactcact
1021 ggtacaaacg ggaggaggtg caaggaggac gagaagctga taaatgctac cctcagggct
1081 ggaaagcgtg gctacatcat tgacacccga tccctgaacg tggctcagca aactagagcc
1141 aaaggaggtg gctttgaaca agaagctcat tatcctcagt ggaggcgaat tcataagtcc
1201 attgagaggt atcacattct tcaggagagc ttaatcaaac ttgtggaagc ttgtaatgac
1261 caaacacata acatggaccg atggctcagt aaattggagg cctctaactg gctgactcac
1321 atcaaagaga ttctgacaac tgcctgccta gcggctcagt gcatcgacag ggaaggagca
1381 tcaatattga ttcacggaac agaaggaact gattccacac tccaggtgac ctccttggcc
1441 cagatcatct tagagccaag aagcaggacc attcgtggtt ttgaggccct gattgaaaga
1501 gagtggctgc aggctggtca cccattccag cagcgctgtg cacagtcagc ctactgtaac
1561 accaagcaga agtgggaggc tcctgtattt cttctcttct tggactgcgt gtggcagatc
1621 cttcgtcagt ttccctgttc ttttgagttt aatgagaatt tcctcatcat gctctttgag
1681 catgcttatg cctcacagtt tggaacattt ctgggcaaca atgaaagtga aagatgtaag
1741 ttgaagctac agcagaagac gatgtctttg tggtcctggg ttaatcagcc cagtgagctg
1801 agtaaattca ccaatcccct ctttgaagcc aacaaccttg tcatctggcc ttcagttgct
1861 ccgcagagtc ttccactgtg ggaaggtatt ttcctacgtt ggaatagatc ctctaagtat
1921 ttggatgaag catatgaaga aatggttaac atcattgaat ataataaaga attacaagca
1981 aaagtcaata tccttcgaag gcagttggca gaactggaaa cagaggacgg gatgcaggag
2041 agtccctgaa aggtctcctc gcacccttcg caaggacctt cttgggcctg tgtccgccgt
2101 tctctccttg tgcccttcag ttcactttta cacggtagcc ttgaagtgaa ggctttagat
2161 gtgggacccc cctaatgtaa tggatttctc aatactgtat gaataatgaa acttactatc
2221 ataaaccatg tttcatgtgg cctgttaggg cctgtcactt tgggagccgg aaggaggtgc
2281 tagtcatttt atttttatgt gaaatagatg acctatttaa tgccatttgt gtttcatgcc
2341 attttatcca aagctttttc tctgtgtcca ctctccaaac agcattctag agcagtcaag
2401 gagacagcta atctctctag ggactatttg gtggtttaaa aaaagggtca gacttttaaa
2461 cactctgacc atagaaatgt ttttcaaaat ggcaacaatg gataaaccaa ggattttgtg
2521 tttaacaatc catttccagt gtcttcgcca cataaaatag ccattttctt taaaatagtt
2581 ttggactaac gaagctgaaa tctattctca ttcttgtttg tcaagaaagg aaaatctgtt
2641 attcaaggta aattatttct acaagggcaa caggtatggt cctccgatat ttacattaag
2701 aagagttaaa tttattttaa cgtagacact aaaagtatgt gcaatataca attaaagtag
2761 gaatttgtta ctgattgaga attgttactg gtgaattggt tttcaggttt tgagcataca
2821 tatacaatgt gtttcaaatg ctgcttgtaa aattaaacca tcatctagaa tagagttaat
2881 ttattataat caagctacaa ataggttttc ttaaaccaga gatgcactgc ccttgtctaa
2941 agttcttatt gcactggttt atatgtgtat gtgtgtttta ttgtgtgttt ttttaatttg
3001 taagtattct aagagtttcc taatactaag gttaaaattt tcatgttgac ctgagccttt
3061 tgcaaatttg ctttggctct attgatttgt ccattatgtg ttaggcaaat ataacttaag
3121 tggaggggga agtttatgaa tataatatag ctctgtgttt taaacctcag aaacagattt
3181 gagtgtttca gtattataga aacagtgatg actattcatg ctctgctagt ctatgcctgc
3241 aactccaaat gtttgtggtt cagtatttcc cacctacatt tctgtttggt gacattgctc
3301 attttaacaa atatgaccga gtctagtttt tctttaaaag gatagtttat gagtaatctt
3361 taaaaccatt tccataccat ctgtatataa ccatttcggt agagaacaca ctacactgaa
3421 ccctgcttta gagctgtgtg ttgagctaaa aatataattt tttaaaaatt gactagcaaa
3481 atctatggcc acactgagaa gcctttgaaa atggcgaata cttttcatca ccaattgccc
3541 aattcatctt tcttctgctt cctcagcctt gtagcaaagg ctacacagca gcccacagtc
3601 cacagtcttt ttgggaaaat tggcctgcca ccttctttaa gctcagttta tttttgactt
3661 actttctttg ctgtagttat gaaccttggg gcattaaaat cccatggcaa ggagcataag
3721 agatgttctc gtagctctgc gttgtgtgaa atgtccatct tagttttgtt aaaaaaaaaa
3781 aaaaaaaaag gaaacagcct cacttttttg tgctccctca gaattgcttg ctatgtctgt
3841 taatacagct gagctttttg ttttcttctc tttttgtctc aagattgtat atgaaggagg
3901 cttttcttct cagctaacag gcatataagg aaaaccatct agagagtttt ctttagaagt
3961 gactcccatt agcctggtgt ggtggtgtgt gcctatagtc ccagccacta ggaaagctga
4021 ggcagaagga tcccttgagc ctaggaggtt gaggctgcag tgagctatga tcgcatcagt
4081 ccactccagc ctgagcaaca gagcgagacc ctgtgtctaa gtaaagaaaa agccagaagt
4141 gactcccact acttctgttg atcggccata gggcttccat gggtggaaac ttgtgaggga
4201 gtttgtatta ggtctggtca tggagggatg atgtaccatc aaggtagacc catcttcctg
4261 atgcacattt gctgtgcgag ccagagtaca gtcataacac ggtattcgca tttcgttttc
4321 tctgtctcac tgagacaaca atctatactg ttttggcaag tttgcatttt agtattaatt
4381 tataattagg gattgttcaa acttcagatc tgtttacagg ttgtaaaaat aaacttcggt
4441 atcagtgcaa aaaaaaaaaa aaaa
//