LOCUS BC034983 3362 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens GTPase activating Rap/RanGAP domain-like 3, mRNA (cDNA clone MGC:32930 IMAGE:4821143), complete cds. ACCESSION BC034983 VERSION BC034983.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3362) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3362) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC034983.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 46 Row: h Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34222344. FEATURES Location/Qualifiers source 1..3362 /db_xref="H-InvDB:HIT000051281" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:32930 IMAGE:4821143" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3362 /gene="GARNL3" /gene_synonym="bA356B19.1" /gene_synonym="DKFZp761J1523" /gene_synonym="RP11-356B19.1" /db_xref="GeneID:84253" /db_xref="HGNC:HGNC:25425" CDS 66..3053 /gene="GARNL3" /gene_synonym="bA356B19.1" /gene_synonym="DKFZp761J1523" /gene_synonym="RP11-356B19.1" /codon_start=1 /product="GTPase activating Rap/RanGAP domain-like 3" /protein_id="AAH34983.1" /db_xref="GeneID:84253" /db_xref="HGNC:HGNC:25425" /translation="MKHFCSSSVSEDLGCRRGDFSRKHYGSVELLISSDADGAIQRAG RFRVENGSSDENATALPGTWRRTDVHLENPEYHTRWYFKYFLGQVRQNYIGNDAEKSP FFLSVTLSDQNNQRVPQYRAILWRKTGTQKICLPYSPTKTLSVKSILSAMNLDKFEKG PREIFHPEIQKDLLVLEEQEGSVNFKFGVLFAKDGQLTDDEMFSNEIGSEPFQKFLNL LGDTITLKGWTGYRGGLDTKNDTTGIHSVYTVYQGHEIMFHVSTMLPYSKENKQQVER KRHIGNDIVTIVFQEGEESSPAFKPSMIRSHFTHIFALVRYNQQNDNYRLKIFSEESV PLFGPPLPTPPVFTDHQEFRDFLLVKLINGEKATLETPTFAQKRRRTLDMLIRSLHQD LMPDLHKNMLNRRSFSDVLPESPKSARKKEEARQAEFVRIGQALKLKSIVRGDAPSSL AASGICKKEPWEPQCFCSNFPHEAVCADPWGQALLVSTDAGVLLVDDDLPSVPVFDRT LPVKQMHVLETLDLLVLRADKGKDARLFVFRLSALQKGLEGKQAGKSRSDCRENKLEK TKGCHLYAINTHHSRELRIVVAIRNKLLLITRKHNKPSGVTSTSLLSPLSESPVEEFQ YIREICLSDSPMVMTLVDGPAEESDNLICVAYRHQFDVVNESTGEAFRLHHVEANRVN FVAAIDVYEDGEAGLLLCYNYSCIYKKVCPFNGGSFLVQPSASDFQFCWNQAPYAIVC AFPYLLAFTTDSMEIRLVVNGNLVHTAVVPQLQLVASRSDIYFTATAAVNEVSSGGSS KGASARNSPQTPPGRDTPVFPSSLGEGEIQSKNLYKIPLRNLVGRSIERPLKSPLVSK VITPPTPISVGLAAIPVTHSLSLSRMEIKEIASRTRRELLGLSDEGGPKSEGAPKAKS KPRKRLEESQGGPKPGAVRSSSSDRIPSGSLESASTSEANPEGHSASSDQDPVADREG SPVSGSSPFQLTAFSDEDIIDLK" BASE COUNT 911 a 795 c 796 g 860 t ORIGIN 1 cctttttgca aatggtagtt gatttttgca gaaggtttgt ggccagatcg ctatgtataa 61 tactgatgaa gcatttttgt tccagctctg tctcggaaga cctaggctgt agacgtgggg 121 atttcagtag gaaacattat ggatctgtgg agctgcttat ttccagtgat gctgatggag 181 ccatccaaag ggctggaaga ttcagagtgg aaaatggctc ttcagatgag aatgcaactg 241 ccctgcctgg tacttggcga agaacagacg tgcacttaga gaacccagaa taccacacca 301 gatggtattt caaatatttt ttaggacaag tccgtcagaa ctacattgga aacgatgccg 361 agaagagccc tttcttcttg tccgtgaccc tttctgacca aaacaatcaa cgtgtccctc 421 aataccgtgc aattctttgg agaaaaacag gtacccagaa aatatgcctt ccctacagtc 481 ccacaaaaac tctttctgtg aagtccatct taagtgccat gaatctggac aaatttgaga 541 aaggccccag ggaaattttt catcctgaaa tacaaaagga cttgctggtt cttgaagaac 601 aagagggctc tgtgaatttc aagtttgggg ttctttttgc caaagatggg cagctcactg 661 atgatgagat gttcagcaat gaaattggaa gcgagccttt tcaaaaattt ttaaatcttc 721 tgggtgacac aatcactcta aagggctgga cgggctaccg tggcggtctg gataccaaaa 781 atgataccac agggatacat tcagtttata ctgtgtacca agggcatgag atcatgtttc 841 atgtttccac catgttgcca tattccaaag agaacaaaca gcaggtggaa aggaaacgcc 901 acattggaaa cgatatcgtc accattgtgt tccaagaagg agaggaatct tctcctgcct 961 ttaagccttc catgatccgc tcccacttta cacatatttt tgccttagtg agatacaatc 1021 aacaaaatga caattacagg ctgaaaatat tttcagaaga gagcgtacca ctctttggcc 1081 ctcccttgcc aactccacca gtgtttacag accaccagga attcagggac tttttgctag 1141 tgaaattaat taatggtgaa aaagccactt tggaaacccc aacatttgcc cagaaacgtc 1201 ggcgtaccct ggatatgttg attagatctt tacaccagga tttgatgcca gatttgcata 1261 agaacatgct taatagacga tcttttagtg atgtcttacc agagtcaccc aagtcagcgc 1321 ggaagaaaga ggaggcccgc caggcggagt ttgttagaat agggcaggca ctaaaactga 1381 aatccattgt gagaggggat gctccatcaa gcttggcagc ttcagggatc tgtaaaaaag 1441 agccgtggga gccccagtgt ttctgcagta atttccctca tgaagccgtg tgtgcagatc 1501 cctggggcca ggccttgctg gtttccactg atgctggcgt cttgctagtg gatgatgacc 1561 ttccatcagt gcccgtgttt gacagaactc tgccagtgaa gcaaatgcat gtgcttgaga 1621 ccctggacct tctggttctc agagcagaca aaggaaaaga tgctcgcctc tttgtcttca 1681 ggctaagtgc tctgcaaaag ggccttgagg ggaagcaggc tgggaagagc aggtctgact 1741 gcagagaaaa caagttggag aaaacaaaag gctgccacct gtatgctatt aacactcacc 1801 acagcagaga gctgaggatt gtggttgcaa ttcggaataa actgcttctg atcacaagaa 1861 aacacaacaa gccaagcggg gtcaccagca cctcattgtt atctcccctg tctgagtcac 1921 ctgttgaaga attccagtac atcagggaga tctgtctgtc tgactctccc atggtgatga 1981 ccttagtgga tgggccagct gaagagagtg acaatctcat ctgtgtggct tatcgacacc 2041 aatttgatgt ggtgaatgag agcacaggag aagccttcag gctgcaccac gtggaggcca 2101 acagggttaa ttttgttgca gctattgatg tgtacgaaga tggagaagct ggtttgctgt 2161 tgtgttacaa ctacagttgc atctataaaa aggtttgccc ctttaatggt ggctcttttt 2221 tggttcaacc ttctgcgtca gatttccagt tctgttggaa ccaggctccc tatgcaattg 2281 tctgtgcttt cccgtatctc ctggccttca ccaccgactc catggagatc cgcctggtgg 2341 tgaacgggaa cctggtccac actgcagtcg tgccgcagct gcagctggtg gcctccaggt 2401 cggatatata cttcacagca actgcagctg tgaatgaggt ctcatctgga ggcagctcca 2461 agggggccag tgcccgaaat tctcctcaga cacccccggg ccgagatact ccagtatttc 2521 cttcttccct gggggaaggt gaaattcaat caaaaaatct gtacaagatt ccacttagaa 2581 acctcgtggg cagaagcatc gaacgacctc tgaagtcacc cttagtctcc aaggtcatca 2641 ccccacccac tcccatcagt gtgggccttg ctgccattcc agtcacgcac tccttgtccc 2701 tgtctcgcat ggagatcaaa gaaatagcaa gcaggacccg cagggaacta ctgggcctct 2761 cggatgaagg tggacccaag tcagaaggag cgccaaaggc caaatcaaaa ccccggaagc 2821 ggttagaaga aagccaagga ggccccaagc caggggcagt gaggtcatct agcagtgaca 2881 ggatcccatc aggctccttg gaaagtgctt ctacttccga agccaaccct gaggggcact 2941 cagccagctc tgaccaggac cctgtggcag acagagaggg cagcccggtc tccggcagca 3001 gccccttcca gctcacggct ttctccgatg aagacattat agacttgaag taacagagtt 3061 gaatctcatt tgccatcttt agttttctta tggaggttta tactctttaa acagttctga 3121 tgtaatttct caacaaaatg tggcttttag cctgtcagtg atctattgga ccaaaccttc 3181 tgcacactcg gccagttccc tctccaatgt ccggtgccat ctttcctgac ctttgtttct 3241 ttctgttcag gaaccatcag tccccttgta ataaaggtgg tagatttcat tgaggtttta 3301 gattgaaact ttgaataaat caaaaatact cattcttatt tactgcaaaa aaaaaaaaaa 3361 aa //