LOCUS BC034977 2336 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens ubiquilin-like, mRNA (cDNA clone MGC:26958
IMAGE:4822902), complete cds.
ACCESSION BC034977
VERSION BC034977.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2336)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2336)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034977.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: e Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50086627.
FEATURES Location/Qualifiers
source 1..2336
/db_xref="H-InvDB:HIT000051277"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26958 IMAGE:4822902"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2336
/gene="UBQLNL"
/gene_synonym="MGC20470"
/gene_synonym="MGC26958"
/db_xref="GeneID:143630"
/db_xref="HGNC:HGNC:28294"
CDS 255..1682
/gene="UBQLNL"
/gene_synonym="MGC20470"
/gene_synonym="MGC26958"
/codon_start=1
/product="ubiquilin-like"
/protein_id="AAH34977.2"
/db_xref="GeneID:143630"
/db_xref="HGNC:HGNC:28294"
/translation="MWHAISRTSRMSQSGCPSGLLADKNISSSATRVIVKTAGNQKDF
MVADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLLKDHDTLSQRGIMDGHTIYLVIKS
KQGSRSLAHSFRDLPTNDPCHRDRNTKGNSSRVHQPTGMNQAPVELAHFVGSDAPKVH
TQNLEVSHPERKAQMLENPSIQRLLSNMEFMWQFISEHLDTQQLMQQNPEVSRLLLDN
SEILLQTLELARNLAMIQEIMQIQQPSQNLEYPLNPQPYLGLETMPGGNNALGQNHAD
INDQMLNSMQDPFGGNPFTALLAGQVLEQVQSSPPPPPPSQEQQDQLTQHPATRVIYN
SSGGFSSNTSANDTLNKVNHTSKANTAMISTKGQSHICATRQPAGIPALPSIELTQQL
QEEYKDATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQLLMNNPYLAAQIMLFTSMP
QLSEQWRQQLPTFLQQTQISDLLSA"
BASE COUNT 652 a 666 c 507 g 511 t
ORIGIN
1 accatgggtg aattatgaat cagtagctat gccaggcctc agctgggcca catctggaga
61 actggggtga gggcacaaca tcacaaaata tctggcccca gtctggtcac tcatcccttt
121 tagggcaaca aggaaactat cctgttgcct gagagcacaa tacctgagac aaaggccagc
181 agaaacattt gtctgccctc accctttctg ccccagcttc cacctgctcc ccatctgccc
241 acccactaaa gcccatgtgg catgccatct ctcgaacatc caggatgtcc cagagtggat
301 gtccatcagg tctgctggca gacaaaaata tctcttcaag tgccactcga gtgatagtga
361 agactgcagg caaccagaaa gactttatgg tagctgatga catctcggta aggcagttca
421 aggagatgct attggctcac ttccaatgcc agatggacca actagtgctg gtcttcatgg
481 gttgccttct caaagaccat gacacactga gccagagggg catcatggat ggccacacca
541 tctacttggt catcaagtcc aagcagggct ccagatctct agcccattcc ttccgggacc
601 tgccaacgaa tgatccctgc caccgggaca gaaacaccaa aggaaacagc agcagagtgc
661 accaaccaac tggtatgaat caagctccag tggaactggc ccactttgtg gggtctgatg
721 cacccaaagt gcatacccaa aacttggaag tgagccaccc agagcgcaaa gcacagatgc
781 tggagaatcc tagcatccag cggcttctgt ccaacatgga gttcatgtgg cagttcattt
841 cagaacatct agacacgcaa caattgatgc agcagaaccc cgaagtttcc cgccttcttc
901 ttgataattc tgagatccta ttgcagactc tggagctggc caggaacctt gctatgatcc
961 aagagataat gcagatccaa caaccttcac aaaaccttga gtatccactg aacccacagc
1021 catatctggg cttagagaca atgccaggtg ggaataatgc cctgggtcag aaccatgctg
1081 atatcaatga tcaaatgctg aacagcatgc aagatccttt tggaggaaac cctttcacag
1141 ctctcctggc aggacaagtg ctagaacaag tccagtcttc acccccacct ccaccaccat
1201 cacaggaaca acaagaccag ctcacacagc atcctgcaac ccgagtcatc tataatagct
1261 ctggtggttt ctcttcaaac acctcagcca atgacaccct taacaaggtc aaccacactt
1321 ccaaagccaa cactgctatg atttccacca agggccagag ccatatctgt gccactcggc
1381 agccagctgg gataccagcc ttacctagca tagagcttac ccagcagctt caagaagaat
1441 acaaggatgc cactgtttct ctaagtagct ccagacagac attaaagggt gatctccagc
1501 tgtcagatga acagagcagc tcccagatca caggaggcat gatgcagttg cttatgaaca
1561 acccctacct ggcagctcag attatgttgt tcacaagtat gccccagctg agtgaacagt
1621 ggaggcagca gctgcccaca ttcctgcagc agacacagat ttctgatctg cttagtgctt
1681 aggcaaccct aaagcattcc aagcaatatt gcagattgag caggccctcc agctgctggc
1741 cacagaggct cctgttcttc tgccttgggt tgcaccctac ctatggggcc tgggttggct
1801 tcctgccccc agctgcagct atcctgacac agtgccctgt tcctggaatg tttcagatac
1861 agctgagccc aagggacctg agtgctgcca caagcctgga acagtcctgc agaggctaca
1921 atccccggat ggggaccctt cccaccctct gcaagctcct gagatttgtt ttagcaaaca
1981 gatggattct ctccaggcca tgggatttgg gaaccaccat gccaatctac aggcactcat
2041 tgctactgaa ggggacacca atgctgctat ccgcaagctc aagagatccc agagattcta
2101 accaccatgc ctacttgttt gcttgctacc tgcctgctga cccacctgac catctcattt
2161 gccttttgca cctttcctga tgcttccagc caggagaagt cctggaataa gagttatcaa
2221 ccaatgtgtc ttgtactgaa taatagatca ttggccgtgg ctgaaacatc tgtcaataaa
2281 atggctacac tcacttgctg cgaaaaaaaa aaaaaaaaag aaaaaaaaaa aaaaaa
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