LOCUS       BC034729                1304 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens lymphotoxin alpha (TNF superfamily, member 1), mRNA
            (cDNA clone MGC:17018 IMAGE:4341621), complete cds.
ACCESSION   BC034729
VERSION     BC034729.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1304)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JUL-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Lou Staudt
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 26 Row: j Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 6806892.
FEATURES             Location/Qualifiers
     source          1..1304
                     /db_xref="H-InvDB:HIT000051218_04"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:17018 IMAGE:4341621"
                     /tissue_type="Lymph, lymphoma"
                     /clone_lib="NIH_MGC_85"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1304
                     /gene="LTA"
                     /gene_synonym="LT"
                     /gene_synonym="TNFSF1"
                     /db_xref="GeneID:4049"
                     /db_xref="HGNC:HGNC:6709"
                     /db_xref="MIM:153440"
     CDS             7..624
                     /gene="LTA"
                     /gene_synonym="LT"
                     /gene_synonym="TNFSF1"
                     /codon_start=1
                     /product="lymphotoxin alpha (TNF superfamily, member 1)"
                     /protein_id="AAH34729.1"
                     /db_xref="GeneID:4049"
                     /db_xref="HGNC:HGNC:6709"
                     /db_xref="MIM:153440"
                     /translation="MTPPERLFLPRVRGTTLHLLLLGLLLVLLPGAQGLPGVGLTPSA
                     AQTARQHPKMHLAHSTLKPAAHLIGDPSKQNSLLWRANTDRAFLQDGFSLSNNSLLVP
                     TSGIYFVYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMVYPGLQ
                     EPWLHSMYHGAAFQLTQGDQLSTHTDGIPHLVLSPSTVFFGAFAL"
BASE COUNT          354 a          395 c          296 g          259 t
ORIGIN      
        1 ctccccatga caccacctga acgtctcttc ctcccaaggg tgcgtggcac caccctacac
       61 ctcctccttc tggggctgct gctggttctg ctgcctgggg cccaggggct ccctggtgtt
      121 ggcctcacac cttcagctgc ccagactgcc cgtcagcacc ccaagatgca tcttgcccac
      181 agcaccctca aacctgctgc tcacctcatt ggagacccca gcaagcagaa ctcactgctc
      241 tggagagcaa acacggaccg tgccttcctc caggatggtt tctccttgag caacaattct
      301 ctcctggtcc ccaccagtgg catctacttc gtctactccc aggtggtctt ctctgggaaa
      361 gcctactctc ccaaggccac ctcctcccca ctctacctgg cccatgaggt ccagctcttc
      421 tcctcccagt accccttcca tgtgcctctc ctcagctccc agaagatggt gtatccaggg
      481 ctgcaggaac cctggctgca ctcgatgtac cacggggctg cgttccagct cacccaggga
      541 gaccagctat ccacccacac agatggcatc ccccacctag tcctcagccc tagtactgtc
      601 ttctttggag ccttcgctct gtagaacttg gaaaaatcca gaaagaaaaa ataattgatt
      661 tcaagacctt ctccccattc tgcctccatt ctgaccattt caggggtcgt caccacctct
      721 cctttggcca ttccaacagc tcaagtcttc cctgatcaag tcaccggagc tttcaaagaa
      781 ggaattctag gcatcccagg ggaccacacc tccctgaacc atccctgatg tctgtctggc
      841 tgaggatttc aagcctgcct aggaattccc agcccaaagc tgttggtctg tcccaccagc
      901 taggtggggc ctagatccac acacagagga agagcaggca catggaggag cttgggggat
      961 gactagaggc agggagggga ctatttatga aggcaaaaaa attaaattat ttatttatgg
     1021 aggatggaga gaggggaata atagaagaac atccaaggag aaacagagac aggcccaaga
     1081 gatgaagagt gagagggcat gcgcacaagg ctgaccaaga gagaaagaag taggcatgag
     1141 ggatcacagg gccccagaag gcagggaaag gctctgaaag ccagctgccg accagagccc
     1201 cacacggagg catctgcacc ctcgatgaag cccaataaac ctcttttctc tgaaaaaaaa
     1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//