LOCUS BC034691 1090 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cysteine-rich hydrophobic domain 2, mRNA (cDNA clone
MGC:21173 IMAGE:4747392), complete cds.
ACCESSION BC034691
VERSION BC034691.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1090)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1090)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29337284.
FEATURES Location/Qualifiers
source 1..1090
/db_xref="H-InvDB:HIT000051202"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21173 IMAGE:4747392"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1090
/gene="CHIC2"
/gene_synonym="BTL"
/gene_synonym="MGC21173"
/db_xref="GeneID:26511"
/db_xref="HGNC:HGNC:1935"
/db_xref="MIM:604332"
CDS 261..758
/gene="CHIC2"
/gene_synonym="BTL"
/gene_synonym="MGC21173"
/codon_start=1
/product="cysteine-rich hydrophobic domain 2"
/protein_id="AAH34691.1"
/db_xref="GeneID:26511"
/db_xref="HGNC:HGNC:1935"
/db_xref="MIM:604332"
/translation="MADFDEIYEEEEDEERALEEQLLKYSPDPVVVRGSGHVTVFGLS
NKFESEFPSSLTGKVAPEEFKASINRVNSCLKKNLPVNVRWLLCGCLCCCCTLGCSMW
PVICLSKRTRRSIEKLLEWENNRLYHKLCLHWRLSKRKCETNNMMEYVILIEFLPKTP
IFRPD"
BASE COUNT 280 a 227 c 267 g 316 t
ORIGIN
1 gcttgtggag gtgtcggcct ctgggcggat gttgacattg tgttgttgtt attgctgatg
61 gtaatggcgg cggcggtggc ggcgacggtc cagaccccat cccctctgta gccggagccg
121 agacagccga cagcgaactc cgcggcctcg gagccggcgg cagcggcgac tcccctcagc
181 ctccgccgcc tcgcccgccg gtaccccggc gccaaccccg ggagtcaggc cctttgggca
241 ggggagctcg gaggctcagg atggcggatt tcgacgaaat ctatgaggaa gaggaggacg
301 aggagcgggc cctggaggag cagctgctca agtactcgcc ggacccggtg gtcgtccgcg
361 gctccggtca cgtcaccgta tttggactga gcaacaaatt tgaatctgaa ttcccttctt
421 cattaactgg aaaagtagct cctgaagaat ttaaagccag catcaacaga gttaacagtt
481 gtcttaagaa gaaccttcct gttaatgtac gttggctact ttgtggctgc ctttgttgct
541 gctgcacatt aggttgcagt atgtggccag ttatttgcct cagtaaaaga acacgaagat
601 cgattgagaa gttattagaa tgggaaaaca ataggttata ccacaagctg tgcttgcatt
661 ggagactgag caaaaggaaa tgtgaaacga ataacatgat ggaatatgtc atcctcatag
721 aatttttacc aaagacaccg atttttcgac cagattagca tttactttat ttatagagac
781 tttccaagta tgttgtcttt ccaatggtgc cttgcttggt gctctcctgg tggtgacata
841 acattggttc tacagaatcg tgtggtgttt tttttgtttt tgtttttttt ttttttttaa
901 ataaccgcat gttctaagtg tgcatttttg tcaatctttg caacagttat ttcatacaga
961 tgtttaatac ttaagttatt gtgctctttt ctgttatgta ttctgatttt caaggattac
1021 ttttttgtat tatcaaaaaa atacatttga acttagcata aaaaaaaaaa aaaaaaaaaa
1081 aaaaaaaaaa
//