LOCUS BC034686 1816 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens acid phosphatase 6, lysophosphatidic, mRNA (cDNA clone
MGC:9655 IMAGE:3463770), complete cds.
ACCESSION BC034686
VERSION BC034686.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1816)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1816)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: b Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1816
/db_xref="H-InvDB:HIT000051198"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9655 IMAGE:3463770"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1816
/gene="ACP6"
/gene_synonym="ACPL1"
/gene_synonym="LPAP"
/gene_synonym="PACPL1"
/db_xref="GeneID:51205"
/db_xref="HGNC:HGNC:29609"
CDS 449..1735
/gene="ACP6"
/gene_synonym="ACPL1"
/gene_synonym="LPAP"
/gene_synonym="PACPL1"
/codon_start=1
/product="acid phosphatase 6, lysophosphatidic"
/protein_id="AAH34686.1"
/db_xref="GeneID:51205"
/db_xref="HGNC:HGNC:29609"
/translation="MITGVFSMRLWTPVGVLTSLAYCLHQRRVALAELQEADGQCPVD
RSLLKLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKP
YSPYDSQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVF
IRSTNIFRNLESTRCLLAGLFQCQKEGPIIIHTDEADSEVLYPNYQSCWSLRQRTRGR
RQTASLQPGISEDLKKVKDRMGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLKRFARM
IEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLYAAH
DVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPDGL
CPLDMFLNAMSVYTLSPEKYHALCSQTQVMEVGNEE"
BASE COUNT 448 a 486 c 488 g 394 t
ORIGIN
1 ggaggtgggt aggagcttgc ttatagaaaa gtggaatcga gtagtccttg ctggtggagc
61 cgctgccgcc agggaactca gggccggctc ctgttccttc aagagtgctg gaggccaaac
121 ttgaaataca agtttaatgt tcctcgtcgg gcaaaagata aagatccgat ctcccccggc
181 ccggtgtgca gcaggagcga ccaaccccga cccgggttaa aactcccagg gactcttcgc
241 tgctgccacc tcttgttctc tcccccgttc ccactcgggg tctccctcag ggccgggagg
301 cacagcggtc cctgcttgct gaggggctgg atgtacgcat ccgcaggttc ccgcggactt
361 gggggcgccc gctgagcccc ggcgcccgca gaagacttgt gtttgcctcc tgcagcctca
421 acccggaggg cagcgagggc ctaccaccat gatcactggt gtgttcagca tgcgcttgtg
481 gaccccagtg ggcgtcctga cctcgctggc gtactgcctg caccagcggc gggtggccct
541 ggccgagctg caggaggccg atggccagtg tccggtcgac cgcagcctgc tgaagttgaa
601 aatggtgcag gtcgtgtttc gacacggggc tcggagtcct ctcaagccgc tcccgctgga
661 ggagcaggta gagtggaacc cccagctatt agaggtccca ccccaaactc agtttgatta
721 cacagtcacc aatctagctg gtggtccgaa accatattct ccttacgact ctcaatacca
781 tgagaccacc ctgaaggggg gcatgtttgc tgggcagctg accaaggtgg gcatgcagca
841 aatgtttgcc ttgggagaga gactgaggaa gaactatgtg gaagacattc cctttctttc
901 accaaccttc aacccacagg aggtctttat tcgttccact aacatttttc ggaatctgga
961 gtccacccgt tgtttgctgg ctgggctttt ccagtgtcag aaagaaggac ccatcatcat
1021 ccacactgat gaagcagatt cagaagtctt gtatcccaac taccaaagct gctggagcct
1081 gaggcagaga accagaggcc ggaggcagac tgcctcttta cagccaggaa tctcagagga
1141 tttgaaaaag gtgaaggaca ggatgggcat tgacagtagt gataaagtgg acttcttcat
1201 cctcctggac aacgtggctg ccgagcaggc acacaacctc ccaagctgcc ccatgctgaa
1261 gagatttgca cggatgatcg aacagagagc tgtggacaca tccttgtaca tactgcccaa
1321 ggaagacagg gaaagtcttc agatggcagt aggcccattc ctccacatcc tagagagcaa
1381 cctgctgaaa gccatggact ctgccactgc ccccgacaag atcagaaagc tgtatctcta
1441 tgcggctcat gatgtgacct tcataccgct cttaatgacc ctggggattt ttgaccacaa
1501 atggccaccg tttgctgttg acctgaccat ggaactttac cagcacctgg aatctaagga
1561 gtggtttgtg cagctctatt accacggaaa ggagcaggtg ccgagaggtt gccctgatgg
1621 gctctgcccg ctggacatgt tcttgaatgc catgtcagtt tataccttaa gcccagaaaa
1681 ataccacgca ctctgctctc aaactcaggt gatggaagtt ggaaatgaag agtaactgat
1741 ttataaaagc aggatgtgtt gattttaaaa taaagtgcct ttatacaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaa
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