LOCUS BC034671 2888 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens carcinoembryonic antigen-related cell adhesion
molecule 5, mRNA (cDNA clone MGC:34212 IMAGE:5184800), complete
cds.
ACCESSION BC034671
VERSION BC034671.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2888)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2888)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: e Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11386170.
FEATURES Location/Qualifiers
source 1..2888
/db_xref="H-InvDB:HIT000051194"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34212 IMAGE:5184800"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2888
/gene="CEACAM5"
/gene_synonym="CD66e"
/db_xref="GeneID:1048"
/db_xref="HGNC:HGNC:1817"
/db_xref="MIM:114890"
CDS 96..2204
/gene="CEACAM5"
/gene_synonym="CD66e"
/codon_start=1
/product="carcinoembryonic antigen-related cell adhesion
molecule 5"
/protein_id="AAH34671.1"
/db_xref="GeneID:1048"
/db_xref="HGNC:HGNC:1817"
/db_xref="MIM:114890"
/translation="MESPSAPPHRWCIPWQRLLLTASLLTFWNPPTTAKLTIESTPFN
VAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIY
PNASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDK
DAVAFTCEPETQDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDSASYKCETQ
NPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGT
FQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNP
VEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYE
CGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWL
IDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSN
NSKPVEDKDAVAFTCEPEAQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDA
RAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQ
YSWRINGIPQQHTQVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSITVSASGTSPG
LSAGATVGIMIGVLVGVALI"
BASE COUNT 833 a 826 c 586 g 643 t
ORIGIN
1 ggacagcaga ccagacagtc acagcagcct tgacaaaacg ttcctggaac tcaagctctt
61 ctccacagag gaggacagag cagacagcag agaccatgga gtctccctcg gcccctcccc
121 acagatggtg catcccctgg cagaggctcc tgctcacagc ctcacttcta accttctgga
181 acccgcccac cactgccaag ctcactattg aatccacgcc gttcaatgtc gcagagggga
241 aggaggtgct tctacttgtc cacaatctgc cccagcatct ttttggctac agctggtaca
301 aaggtgaaag agtggatggc aaccgtcaaa ttataggata tgtaatagga actcaacaag
361 ctaccccagg gcccgcatac agtggtcgag agataatata ccccaatgca tccctgctga
421 tccagaacat catccagaat gacacaggat tctacaccct acacgtcata aagtcagatc
481 ttgtgaatga agaagcaact ggccagttcc gggtataccc ggagctgccc aagccctcca
541 tctccagcaa caactccaaa cccgtggagg acaaggatgc tgtggccttc acctgtgaac
601 ctgagactca ggacgcaacc tacctgtggt gggtaaacaa tcagagcctc ccggtcagtc
661 ccaggctgca gctgtccaat ggcaacagga ccctcactct attcaatgtc acaagaaatg
721 actcagcaag ctacaaatgt gaaacccaga acccagtgag tgccaggcgc agtgattcag
781 tcatcctgaa tgtcctctat ggcccggatg cccccaccat ttcccctcta aacacatctt
841 acagatcagg ggaaaatctg aacctctcct gccacgcagc ctctaaccca cctgcacagt
901 actcttggtt tgtcaatggg actttccagc aatccaccca agagctcttt atccccaaca
961 tcactgtgaa taatagtgga tcctatacgt gccaagccca taactcagac actggcctca
1021 ataggaccac agtcacgacg atcacagtct atgcagagcc acccaaaccc ttcatcacca
1081 gcaacaactc caaccccgtg gaggatgagg atgctgtagc cttaacctgt gaacctgaga
1141 ttcagaacac aacctacctg tggtgggtaa ataatcagag cctcccggtc agtcccaggc
1201 tgcagctgtc caatgacaac aggaccctca ctctactcag tgtcacaagg aatgatgtag
1261 gaccctatga gtgtggaatc cagaacgaat taagtgttga ccacagcgac ccagtcatcc
1321 tgaatgtcct ctatggccca gacgacccca ccatttcccc ctcatacacc tattaccgtc
1381 caggggtgaa cctcagcctc tcctgccatg cagcctctaa cccacctgca cagtattctt
1441 ggctgattga tgggaacatc cagcaacaca cacaagagct ctttatctcc aacatcactg
1501 agaagaacag cggactctat acctgccagg ccaataactc agccagtggc cacagcagga
1561 ctacagtcaa gacaatcaca gtctctgcgg agctgcccaa gccctccatc tccagcaaca
1621 actccaaacc cgtggaggac aaggatgctg tggccttcac ctgtgaacct gaggctcaga
1681 acacaaccta cctgtggtgg gtaaatggtc agagcctccc agtcagtccc aggctgcagc
1741 tgtccaatgg caacaggacc ctcactctat tcaatgtcac aagaaatgac gcaagagcct
1801 atgtatgtgg aatccagaac tcagtgagtg caaaccgcag tgacccagtc accctggatg
1861 tcctctatgg gccggacacc cccatcattt cccccccaga ctcgtcttac ctttcgggag
1921 cgaacctcaa cctctcctgc cactcggcct ctaacccatc cccgcagtat tcttggcgta
1981 tcaatgggat accgcagcaa cacacacaag ttctctttat cgccaaaatc acgccaaata
2041 ataacgggac ctatgcctgt tttgtctcta acttggctac tggccgcaat aattccatag
2101 tcaagagcat cacagtctct gcatctggaa cttctcctgg tctctcagct ggggccactg
2161 tcggcatcat gattggagtg ctggttgggg ttgctctgat atagcagccc tggtgtagtt
2221 tcttcatttc aggaagactg acagttgttt tgcttcttcc ttaaagcatt tgcaacagct
2281 acagtctaaa attgcttctt taccaaggat atttacagaa aagactctga ccagagatcg
2341 agaccatcct agccaacatc gtgaaacccc atctctacta aaaatacaaa aatgagctgg
2401 gcttggtggc gcgcacctgt agtcccagtt actcgggagg ctgaggcagg agaatcgctt
2461 gaacccggga ggtggagatt gcagtgagcc cagatcgcac cactgcactc cagtctggca
2521 acagagcaag actccatctc aaaaagaaaa gaaaagaaga ctctgacctg tactcttgaa
2581 tacaagtttc tgataccact gcactgtctg agaatttcca aaactttaat gaactaactg
2641 acagcttcat gaaactgtcc cccaagatca agcagagaaa ataattaatt tcatgggact
2701 aaatgaacta atgaggataa tattttcata attttttatt tgaaattttg ctgattcttt
2761 aaatgtcttg tttcccagat ttcaggaaac tttttttctt ttaagctatc cacagcttac
2821 agcaatttga taaaatatac ttttgtgaac aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2881 aaaaaaaa
//