LOCUS BC034624 1443 bp mRNA linear HUM 06-OCT-2005
DEFINITION Homo sapiens ADAM metallopeptidase domain 18, mRNA (cDNA clone
IMAGE:4827627), complete cds.
ACCESSION BC034624
VERSION BC034624.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1443)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1443)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: b Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7656860
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1443
/db_xref="H-InvDB:HIT000093511"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4827627"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1443
/gene="ADAM18"
/gene_synonym="ADAM27"
/gene_synonym="tMDCIII"
/db_xref="GeneID:8749"
/db_xref="HGNC:HGNC:196"
/db_xref="IMGT/GENE-DB:196"
/db_xref="MIM:196"
CDS 36..584
/gene="ADAM18"
/gene_synonym="ADAM27"
/gene_synonym="tMDCIII"
/codon_start=1
/product="ADAM18 protein"
/protein_id="AAH34624.1"
/db_xref="GeneID:8749"
/db_xref="HGNC:HGNC:196"
/db_xref="IMGT/GENE-DB:196"
/db_xref="MIM:196"
/translation="MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERK
MIYIITIDGQPYTLHLGKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFP
NSFVTLSICSGLRGFLQFENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHI
WQKDQPYKVPLNSQVTVIILML"
BASE COUNT 441 a 248 c 233 g 521 t
ORIGIN
1 gtccttggct gtggctcctg cgctctggct gagccatgtt ccttctcctc gccctcctca
61 ctgagcttgg aagactgcaa gcccacgaag gttctgaagg aatatttctg catgtcacag
121 ttccacggaa gattaagtca aatgacagtg aagtttcaga gaggaagatg atttacatca
181 ttacaattga tggacaacct tacactctac atctcggaaa acaatcattc ttaccccaga
241 actttttggt ttatacatat aatgaaactg gatctttgca ttctgtgtct ccatatttta
301 tgatgcattg ccattaccaa ggatatgctg ccgaatttcc aaattcattt gtgacactca
361 gtatatgttc tggtctcagg ggatttctcc agtttgaaaa tatcagttat ggaattgaac
421 cagtagaatc ttcagcaaga tttgagcata taatttatca aatgaaaaat aatgatccaa
481 atgtatccat tttagcagta aattacagtc atatttggca gaaagaccag ccctacaaag
541 ttcctttaaa ctcacaggtg actgtcatca ttctgatgtt atgacatact agaacattgc
601 ctgtgtagtt ttcttgtaaa tcatgaaagg aatttagtta gctgttgagt aggaatatta
661 aattttatgt atttttctac ctttaaataa aacattgaaa cttcatctaa aatatttgga
721 aagttacata tttcaagctt aatattttat gatgtattat gtaacattaa tttttatatt
781 tttttcaaac aaaatgatac tattgaaaaa gtttagaaat gcagaaagaa cagagtcact
841 gttattctag taccttggta aaattacttt taatattttg ttatatatct tacatactac
901 ctgaacatat ctttctaaaa tgcacagcca tttgcatgtt gccagatgct cttaatttgc
961 tggtagacta ggtatagaat tcttgctggc agtttctttc tttcagcact ttgaatattt
1021 caatccatca ccatgtggcc tctgtttttt ctgataaaaa tattctatta ttcttattgg
1081 gaattccttg gacaaaatga gttgcttctc ttttgtttct tttgagattc ttcctttgcc
1141 tttgtcttat ggcagtgtgc ttatcatgtt tctatgaatg tatctctttg tgtttaccat
1201 acttggagct caaagcactt cttgggtctg aaaatggatg tgttttgaaa ttaaattagc
1261 ttgtgtgaat cctgaaaaaa aaaaatccca tgaagctatg aaaccaacta tctgtatggt
1321 tcctagagac ttcacacttt tattctactt taaaatttgt ctcgattttg tagttcatta
1381 ttgccaaaag tatttactgg gataaataaa aaaagcattc ttctcggaaa aaaaaaaaaa
1441 aaa
//