LOCUS BC034589 4253 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens KIAA0090, mRNA (cDNA clone MGC:41898 IMAGE:4831005),
complete cds.
ACCESSION BC034589
VERSION BC034589.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4253)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4253)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: i Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22095330.
FEATURES Location/Qualifiers
source 1..4253
/db_xref="H-InvDB:HIT000051188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41898 IMAGE:4831005"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4253
/gene="KIAA0090"
/gene_synonym="RP1-43E13.1"
/db_xref="GeneID:23065"
/db_xref="HGNC:HGNC:28957"
CDS 44..3025
/gene="KIAA0090"
/gene_synonym="RP1-43E13.1"
/codon_start=1
/product="KIAA0090"
/protein_id="AAH34589.1"
/db_xref="GeneID:23065"
/db_xref="HGNC:HGNC:28957"
/translation="MAAEWASRFWLWATLLIPAAAVYEDQVGKFDWRQQYVGKVKFAS
LEFSPGSKKLVVATEKNVIAALNSRTGEILWRHVDKGTAEGAVDAMLLHGQDVITVSN
GGRIMRSWETNIGGLNWEITLDSGSFQALGLVGLQESVRYIAVLKKTTLALHHLSSGH
LKWVEHLPESDSIHYQMVYSYGSGVVWALGVVPFSHVNIVKFNVEDGEIVQQVRVSTP
WLQHLSGACGVVDEAVLVCPDPSSRSLQTLALETEWELRQIPLQSLDLEFGSGFQPRV
LPTQPNPVDASRAQFFLHLSPSHYALLQYHYGTLSLLKNFPQTALVSFATTGEKTVAA
VMACRNEVQKSSSSEDGSMGSFSEKSSSKDSLACFNQTYTINLYLVETGRRLLDTTIT
FSLEQSGTRPERLYIQVFLKKDDSVGYRALVQTEDHLLLFLQQLAGKVVLWSREESLA
EVVCLEMVDLPLTGAQAELEGEFGKKADGLLGMFLKRLSSQLILLQAWTSHLWKMFYD
ARKPRSQIKNEINIDTLARDEFNLQKMMVMVTASGKLFGIESSSGTILWKQYLPNVKP
DSSFKLMVQRTTAHFPHPPQCTLLVKDKESGMSSLYVFNPIFGKWSQVAPPVLKRPIL
QSLLLPVMDQDYAKVLLLIDDEYKVTAFPATRNVLRQLHELAPSIFFYLVDAEQGRLC
GYRLRKDLTTELSWELTIPPEVQRIVKVKGKRSSEHVHSQGRVMGDRSVLYKSLNPNL
LAVVTESTDAHHERTFIGIFLIDGVTGRIIHSSVQKKAKGPVHIVHSENWVVYQYWNT
KARRNEFTVLELYEGTEQYNATAFSSLDRPQLPQVLQQSYIFPSSISAMEATITERGI
TSRHLLIGLPSGAILSLPKALLDPRRPEIPTEQSREENLIPYSPDVQIHAERFINYNQ
TVSRMRGIYTAPSGLESTCLVVAYGLDIYQTRVYPSKQFDVLKDDYDYVLISSVLFGL
VFATMITKRLAQVKLLNRAWR"
BASE COUNT 1019 a 1012 c 1109 g 1113 t
ORIGIN
1 ggtgcatgcc gggacggcgg tgggtggtgc atgcgctcgc atcatggcgg ctgagtgggc
61 ttctcgtttc tggctttggg ctacgctgct gattcctgcg gccgcggtct acgaagacca
121 agtgggcaag tttgattgga gacagcaata tgttgggaag gtcaagtttg cctccttgga
181 attttcccct ggatccaaga agttggttgt agccacagag aagaatgtga ttgcagcatt
241 aaattcccga actggggaga tcttgtggcg ccatgttgac aagggcacgg cagaaggggc
301 tgtggatgcc atgctgctgc acggacagga tgtgatcact gtgtccaatg gaggccgaat
361 catgcgttcc tgggagacta acatcggggg cctgaactgg gagataaccc tggacagtgg
421 cagtttccag gcacttgggc tggttggcct gcaggagtct gtaaggtaca tcgcagtcct
481 gaagaagact acacttgccc tccatcacct ctccagtggg cacctcaagt gggtggaaca
541 tctcccagaa agtgacagca tccactacca gatggtgtat tcttacggct ctggggtggt
601 gtgggccctc ggagttgttc ccttcagcca tgtgaacatt gtcaagttta atgtggaaga
661 tggagagatt gttcagcagg ttagggtttc aactccgtgg ctgcagcacc tgtctggagc
721 ctgtggtgtg gtggatgagg ctgtcctggt gtgtcctgac ccgagctcac gttccctcca
781 aactttggct ctggagacgg aatgggagtt gagacagatc ccactgcagt ctctcgactt
841 agaatttgga agtggattcc aaccccgggt cctgcctacc cagcccaacc cagtggacgc
901 ttcccgggcc cagttcttcc tgcacttgtc cccaagccac tatgctctgc tgcagtacca
961 ttatggaacg ctgagtttgc ttaaaaactt cccacagact gccctagtga gctttgccac
1021 cactggggag aagacggtgg ctgcagtcat ggcctgtcgg aatgaagtgc agaaaagtag
1081 cagttctgaa gatgggtcaa tggggagctt ttcggagaag tctagttcaa aggactctct
1141 ggcttgcttc aatcagacct acaccattaa cctatacctc gtggagacag gtcggcggct
1201 gctggacacc acgataacat ttagcctgga acagagcggc actcggcctg agcggctgta
1261 tatccaggtg ttcttgaaga aggatgactc agtgggctac cgggctttgg tgcagacaga
1321 ggatcatctg ctacttttcc tgcagcagtt ggcagggaag gtggtgctgt ggagccgtga
1381 ggagtccctg gcagaagtgg tgtgcctaga gatggtggac ctccccctga ctggggcaca
1441 ggccgagctg gaaggagaat ttggcaaaaa ggcagatggc ttgctgggga tgttcctgaa
1501 acgcctctcg tctcagctta tcctgctgca agcatggact tcccacctct ggaaaatgtt
1561 ttatgatgct cggaagcccc ggagtcagat taagaatgag atcaacattg acaccctggc
1621 cagagatgaa ttcaacctcc agaagatgat ggtgatggta acagcctcag gcaagctttt
1681 tggcattgag agcagctctg gcaccatcct gtggaaacag tatctaccca atgtcaagcc
1741 agactcctcc tttaaactga tggtccagag aactactgct catttccccc atcccccaca
1801 gtgcaccctg ctggtgaagg acaaggagtc gggaatgagt tctctgtatg tcttcaatcc
1861 catttttggg aagtggagtc aggtagctcc cccagtgctg aagcgcccca tcttgcagtc
1921 cttgcttctc ccagtcatgg atcaagacta cgccaaggtg ttgctgttga tagatgatga
1981 atacaaggtc acagcttttc cagccactcg gaatgtcttg cgacagctac atgagcttgc
2041 cccttccatc ttcttctatt tggtggatgc agagcaggga cggctgtgtg gatatcggct
2101 tcgaaaggat ctcaccactg agctgagttg ggagctgacc attcccccag aagtacagcg
2161 gatcgtcaag gtgaagggga aacgcagcag tgagcacgtt cattcccagg gccgtgtgat
2221 gggggaccgc agtgtgctct acaagagcct gaaccccaac ctgctggccg tggtgacaga
2281 gagcacagac gcgcaccatg agcgcacctt tattggcatc ttcctcattg atggcgtcac
2341 tgggcgtatc attcactcct ctgtgcagaa gaaagccaaa ggccctgtcc atatcgtgca
2401 ttcagagaac tgggtggtgt accagtactg gaacaccaag gctcggcgca acgagtttac
2461 cgtactggag ctctatgagg gcactgagca atacaacgcc accgccttca gctccctgga
2521 ccgcccccag ctgccccagg tcctccagca gtcctatatc ttcccgtcct ccatcagtgc
2581 catggaggcc accatcaccg aacggggcat caccagccga cacctgctga ttggactacc
2641 ttctggagca attctttccc ttcctaaggc tttgctggat ccccgccgcc ccgagatccc
2701 aacagaacaa agcagagagg agaacttaat cccgtattct ccagatgtac agatacacgc
2761 agagcgattc atcaactata accagacagt ttctcgaatg cgaggtatct acacagctcc
2821 ctcgggtctg gagtccactt gtttggttgt ggcctatggt ttggacattt accaaactcg
2881 agtctaccca tccaagcagt ttgacgttct gaaggatgac tatgactacg tgttaatcag
2941 cagcgtcctc tttggcctgg tttttgccac catgatcact aagagactgg cacaggtgaa
3001 gctcctgaat cgggcctggc gataaagaac aaagactgtg cctaaaagtg gagagccagg
3061 ggagtgtggg tcagataagc agctacagct gcagtttggt ggattggtgg agtatgtgtg
3121 tgtgtcagtg ctcagctaag aactgtaggg aagatggatg accttcacgc agaactcctt
3181 ttgggatata catgatgcag aaaggatcct acatggagag agacagaact ctctcagctg
3241 acactctcag agattcctga tgggctttct cttgaagtcc aaaggcgtct gcattgtttc
3301 ctttctttgc ccatccatga atgttctgtt ttgttttttt taataagaat tccggctgat
3361 ttttgtgagg cctgtttaaa ttgactttac tttgcctttt gtgtttctca attttatcta
3421 gaaatctttc tgactttttc catctcttgc ttcaaagtaa gaggggaact ctccttgccg
3481 actccacctt ataggtacat ttggtgtttt gcactgggaa gaaataggat ccatccttag
3541 ctgaggcttg aggactgatc cagcctctca tggcttccct ccaaagtaac ttagggttga
3601 gggatctata tgtgatgtca aaacttactt taaacctcta gtttcgtgct gtcatttatt
3661 aggctgggcc accaaatctt tgtttcaatt tatcagaagc caagtgcata ctagcgtctt
3721 gtttgttgcc cattgcctat acttttcacc tgagatgtgt gagttggggc cttttaaaaa
3781 ctactgaatt gtctgagcct tgaagacatt tccagggaga agagataatc tctcatttca
3841 cccacaggct ggtctaatca taacctagtt aaagatgtcc ttgtttaaga accccattat
3901 ttatttttag tttttaatat aaattaacat gtgggtcatt atatttctcc ttaaatgagg
3961 aaattttaaa ttttattgat ctaacctttg aagctttaaa aaaggagaaa gagggtaggg
4021 gtgggaaact ggcatactgt gtgtatagca ctgccgattg gctaggccac tgtgtctctg
4081 ctacaaatta aagaaatcct aaaagttttc cttggtcata gagttgggga atgacagaat
4141 ttttctttgt tgtgaaatgt atgtacagag tagaccatct ctagccctgt ggtgaaagag
4201 gtacactcga atgtttgcat aaagcaagtg acaaatgaaa aaaaaaaaaa aaa
//