LOCUS BC034571 3348 bp mRNA linear HUM 19-OCT-2006
DEFINITION Homo sapiens phospholipase A2, group IVD (cytosolic), mRNA (cDNA
clone IMAGE:5167964), complete cds.
ACCESSION BC034571
VERSION BC034571.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3348)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3348)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: p Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29837661
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..3348
/db_xref="H-InvDB:HIT000051186"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5167964"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3348
/gene="PLA2G4D"
/gene_synonym="cPLA2delta"
/db_xref="GeneID:283748"
/db_xref="HGNC:HGNC:30038"
CDS 54..704
/gene="PLA2G4D"
/gene_synonym="cPLA2delta"
/codon_start=1
/product="PLA2G4D protein"
/protein_id="AAH34571.1"
/db_xref="GeneID:283748"
/db_xref="HGNC:HGNC:30038"
/translation="MGRLMRRIPEPRICFLEAIWSNIFSLNLLDAWYDLTSSGESWKQ
HIKDKTRSLEKEPLTTSGTSSRLEASWLQPGTALAQAFKGFLTGRPLHQRSPNFLQGL
QLHQDYCSHKDFSTWADYQLDSMPSQLTPKEPRLCLVDAAYFINTSSPSMFRPGRRLD
LILSFDYSLSAPFEVPWSPQGNPSAQPGQAPEASSRATEPLPHTARVPKGRRGVRP"
BASE COUNT 712 a 962 c 802 g 872 t
ORIGIN
1 tcctgaagta cggggccttc gtccctcctg agctcttcgg ctccgagttc ttcatgggac
61 ggctgatgag gaggatcccg gagccccgga tctgctttct ggaagccatc tggagcaaca
121 ttttctccct gaacctgctg gatgcctggt atgacctcac cagttctggg gagtcctgga
181 aacagcacat caaggacaag accaggagct tagagaagga gcccctgacc acctcgggga
241 cctcctcgcg gctggaggcc tcgtggctgc agccaggcac ggcgctggcc caggcattta
301 aaggcttcct gacaggcagg cccctccacc agcgcagccc caacttcctc cagggcctcc
361 agctgcacca ggactactgt agccacaaag acttctccac ctgggcagac taccagcttg
421 actccatgcc cagccagctg acccccaagg agccccggct ctgcctggtg gacgccgcct
481 acttcatcaa caccagctct ccctccatgt tccggccagg ccgcaggctg gacctcatcc
541 tctccttcga ctactcccta tctgcgccct tcgaggtacc ctggtcaccc caggggaacc
601 cctctgccca gccaggccaa gctccagagg cgagcagcag ggccactgag cccctgcccc
661 acaccgcccg ggtcccgaag ggaaggagag gtgtcaggcc ttgatctgct ggctcctgcc
721 agggtcctta ggtgggaagg ctggggtggt gcaggggcct tgggctccca ggacaggtga
781 acagggaggg acctccccac acctactcca aagaacagct ggacggagct gagaggagac
841 cctagcatct ccatgtccat cccccagacc tcccctgaga cgctgtgcca atgtgggtct
901 cctctcggct ctgggatttg aacagtccag caatagcaat ccagaattgg ggttttgggg
961 ggctggggga tgggtctgac cccacctaga gcttttaacc aaacaacatt gcagaccacc
1021 agagtccttg gactccccct gggtctccct ccgagtcact ctgcagcttg gcccgaccac
1081 aaacaggaca gagccaggct gttgtcttga cactgaagca gctggtgtgg gctggaactg
1141 gcccagcatt gacctgggcc gggctggttc tctccgggcc accttctccc ccccaggcac
1201 tgcagcagac ggagctgtac tgccgggccc gggggctgcc cttcccccgg gtggaaccca
1261 gccctcagga ccagcaccag ccaagggaat gccacctctt ctcagacccc gcctgccccg
1321 aggccccgat cctgctgcac ttcccgctgg tcaatgcctc cttcaaggac cactcagccc
1381 ccggtgtcca gcgcagcccc gcagagctcc agggtggcca agtggatctc accggggcca
1441 cctgccccta caccctgtcc aacatgacct acaaggagga agacttcgag cgcctgctgc
1501 ggctcagtga ctacaacgtg cagaccagcc agggtgccat cctgcaggcc ctgaggaccg
1561 cgctgaagca ccggactcta gaggcgaggc ctccaagggc acagacctga ggttgctcag
1621 aggctgcagg accctccagg gcctgcgggc ataacctgat ctgtagctgg gctcagccac
1681 aggccttcct ggttggagtt ctgggctctc ccaggcctgg gtggcctctg tagctggtct
1741 cactgcccag agggaactgc acacacagac ttctctctta cgttcatggc tggcttgaga
1801 tgagttgaaa ataacttcgc caggccagtg tgtagaacag ctggtccaac cagacagact
1861 ttcacaccac aattacttcc atgcctgagc aggatagatt tgaagtgcaa gccggaggca
1921 gcagatcagg agtagggaca ggaaggacag gggatgcctg acctgacagg tggcttcagg
1981 cctcgggaat cacaagacat cctgaacaca ttgcctcctc atcttcttcc tgctcctcca
2041 cctcctcctc tccttgtcct tctcctcttt gtcctcctgc tttccgtatc caagtcttgt
2101 acttgtttaa atttattcct aaatatttta ttctttttga taagtggagt tactttctta
2161 atttcattta gattattcat tgctatttta tagaaataca atggattttt aaatgttgat
2221 cttgtattcc gcaatcttgc tgaagttgtt taccggctct aatacttttg cggatttctt
2281 agaattttct gtagacagat catgccatct ccaaatagag atggttttac ttcttcctgt
2341 ctgatctgaa tgccttttat ttatttttcc caattgccct gagcagtaca atgatgaaca
2401 cacgtttcaa gagcagacat cttgtcttgt tcctgactct gacaagaaag cataagtctc
2461 tcaccattta gtgtgatttt agctgtgggt ttttcttgga catccttatc aggttgagaa
2521 agttctcttt tatttctagt ttattgagtg ttttatgatg aaacggtgtt aggttttgtc
2581 aagtgatttt tctgtgtcta tgggcatgat catgtggttt tgtcgtgtat tttattaatg
2641 tactctattg cattaattgg tttttggata ttaaaccaac tttgcattcc tggggcagtt
2701 tccatttgat tatggtatat aaaccttttt gtttattgct ggcacatttc tttttctttt
2761 tctttctttt tttttttttt ttgagacaga atctcatcac actctgtcac ccaggccaag
2821 ttcaatggtg caatctggct cactgcatcc tcaacttcct gggctcaagt gatccttcca
2881 cttcagcctc ccaagtagct gggactacag gcatgtaaca ccatacttgg ctaaattaaa
2941 aaaatggttt tttgtagaga tgaggtctca ccatgttgcc caggctggtc ttgaactcct
3001 gaactcaagc aatcctcctg cctcagcctc ccaaagtgct gggattactg gtgtgagcca
3061 ccacggccag ctgctagcac attttttacc tccctcatgc aagggtgcgt gtacacatac
3121 acacacacac acacctggcc ccaggtgggg gttgtagtga gagcttcggg acagaccttg
3181 gctcagggac tgccctcatt tgatgtcctt tttcagcttc cttccctgtg ccttttttgc
3241 atttggcttt attttgattt ttcacttttt ccctttatca tggactttta tttttttaac
3301 agtgatatgg gaattgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//