LOCUS BC034544 1619 bp mRNA linear HTC 21-SEP-2006 DEFINITION Homo sapiens SHC (Src homology 2 domain containing) transforming protein 2, mRNA (cDNA clone IMAGE:4752153), with apparent retained intron. ACCESSION BC034544 VERSION BC034544.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1619) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1619) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: James Cleaver, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 29 Row: k Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1619 /db_xref="H-InvDB:HIT000093465" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4752153" /tissue_type="Skin, squamous cell carcinoma" /clone_lib="NCI_CGAP_Skn4" /lab_host="DH10B" /note="Vector: pCMV-SPORT6.1" BASE COUNT 348 a 499 c 483 g 289 t ORIGIN 1 gccccgcggc caatgcagta agaccagaca aggaaacgag aggcgtacgc tttgggaagg 61 aagcccacct gacaaggcag gaaaaagaaa taggagttaa cctctgaaag aaagagctgc 121 tgttaccctt tgtacatgct tagtacgtgc ctagaaaacc caacctgggg agtccaggtt 181 gctacacatg tgagcccacc gcaggcacgg ggctgggcag agtgcgagtc tgatacactg 241 tgggtgctca gtcagcgcag gccgacgggt gcatgaggga ctccctgggg aacctgtttc 301 tcccagctct ggtcccggca ggagtagctg cttgccccct gcctgcccag cactcctgtc 361 cctggcctgc aggacccttt gaggatgccc tgaagttgca tgagtgctca gtggcggcag 421 gcgtgacagc agcccctctt cccttggagg accagtggcc cagcccccct acccgccggg 481 cccctgtggc ccccacggag gaacagctgc gtcaggagcc ctggtaccac ggccggatga 541 gccgccgggc ggcagagagg atgcttcgag ctgacgggga cttccttgtg cgagacagcg 601 tcaccaaccc cgggcagtat gtcctcaccg gcatgcacgc cgggcagccc aagcacctgc 661 tgctcgtgga ccccgagggc gtggtacgga cgaaggacgt gctgtttgag agcatcagcc 721 acctgatcga ccaccacctg cagaacgggc agcccatcgt ggccgccgag agtgagctgc 781 acctgcgtgg cgtggtctca cgggagccct gagccaggtg accgttttca gccctggctc 841 ctgcctgttc tcagccccag ctcctgcctg tcatggcctt ggggctctca gccctcctcc 901 tggatcctgg tcaggccgaa ccaccgctgc ctctccttcc tccgcatgag cctctggcat 961 ggtccttcct ccagctggcc ccgggctggg cagagcctcc tcctgccggg gcccctgccc 1021 accccctcct ttgcctggag tgagggtgtt cataccaaag acggaaccat ttcgccttta 1081 aagaaaatat atccagaagc agccgctgcc tcggagccct ggcccgtggg tccccctctc 1141 gcctggctgg ttcggtctaa cgccccggag agtcagagct cccaggaccc tggggaggag 1201 gcggattccg ggcctggctg ggcttcctct tcccacctga ggactgggtg cacagttgtc 1261 tttgaggggg gacgcttaag gtgctttggg gttctcaggc caggatacat gctggcgctg 1321 aagtgcaggc agccttgagg tcacctggga tctcggggta gccaggctgc tccaagacag 1381 tggatatcga ggcagtcgtg aggcccctac tccacctggg agcaggggaa ggacgtggtt 1441 gcctggcctg ggctgcgccc agcagcttcc ccccaatcct gccctcccag ctgtcgaccc 1501 agatgggatg ttcggatcgg tttgtaatta aacctgggaa tggccacaag aaaaaaaaaa 1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //