LOCUS BC034487 2884 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens histone cluster 1, H2ak, mRNA (cDNA clone MGC:26490
IMAGE:4825623), complete cds.
ACCESSION BC034487
VERSION BC034487.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2884)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2884)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC034487.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: l Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15718714.
FEATURES Location/Qualifiers
source 1..2884
/db_xref="H-InvDB:HIT000051162"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26490 IMAGE:4825623"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2884
/gene="HIST1H2AK"
/gene_synonym="H2A/d"
/db_xref="GeneID:8330"
/db_xref="HGNC:HGNC:4726"
/db_xref="MIM:602788"
CDS 37..429
/gene="HIST1H2AK"
/gene_synonym="H2A/d"
/codon_start=1
/product="histone cluster 1, H2ak"
/protein_id="AAH34487.1"
/db_xref="GeneID:8330"
/db_xref="HGNC:HGNC:4726"
/db_xref="MIM:602788"
/translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERV
GAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVT
IAQGGVLPNIQAVLLPKKTESHHKAKGK"
BASE COUNT 893 a 589 c 614 g 788 t
ORIGIN
1 agtttcagga acgttactga ttgaattttt tacgtcatgt cgggacgtgg caagcagggc
61 ggcaaagctc gcgccaaggc taagacccgt tcttcaaggg cgggtcttca gttcccagtg
121 ggccgagtgc accgactgct ccgcaagggc aactacgctg agcgggtcgg tgccggagcg
181 ccggtgtacc tggcggcggt gttggagtac ctaaccgccg agatcctgga actggctggc
241 aacgcggccc gcgacaacaa gaagacccgc atcatcccgc gccacttgca gctggccatc
301 cgcaacgacg aggagctcaa caagctgctt ggtaaagtga ccatcgccca gggtggtgtc
361 ctgcccaata tccaggccgt gctgctgcct aagaaaactg agagccacca caaggccaag
421 ggcaagtagc ggggctggag cagttcatta ctcatacctc ggtccaaacc aaaaaggttc
481 ttttcagagc cacctacttt ttcaccaagt agagctgtgt tcagttttat ctgatagtcg
541 agtcattttg caatggcact ggaatgctgt atggagatga agcaaaacta aacggctttt
601 acaccacatt gttttgagat agaaagtaga cattgaaatg tttacggtac atcaagaaat
661 ttaggcgcgg cagctcgcgc ctgcaataca gctgaaacaa taagaaaagt gaggcaatag
721 aataacaaag ggagctgaaa gttagagggc agaataagta aaagcaaagg gcagaagtaa
781 ggtagatggg cgggtgaaca agaagcgaga taacaagcag tgaacctttt gcagccgaaa
841 caaaagagat aatgtgagca aggacctcgt ggccggcaag atctggaaca aaccagttta
901 agaggcagct cttcagagat gggcatgcgt attagagagg aaaagtatcc ttaacaaaag
961 cccgtatgat aatcagctac ttaaggttca tgcatatggg ctacatatca tgcatatatt
1021 taagattata agatagaggc acaagccaca gaggacaaag taagcaacaa acctatcaat
1081 aaaagggcag atgctggcta tagattaggc agcactggga acagaaaaca tacacacacg
1141 cacgcacaca cataaaatga ctcaaactac agcaagctga cgctgatctc acctcgcaga
1201 ggtcagtccg ctctctccca cccccgagag tgtaatactc tgtttactaa acttttgctg
1261 ctttgctttg ctatctgtgt gtgtgtcgtc caatttctac cgggcaccaa gagcctggaa
1321 ctgtttggca ccatccggta aacagaaccg ctttgggaag ccgaggcgga aggaccgcta
1381 gagccttgga gttcgaagcc agcctgatct ttacaaaagt aaaataacta accgtgcctg
1441 gcgtctcata gcctgtagtc ctagctactc gggaggctga gaccagaagg atcacttgag
1501 cccaggagtt cgaggctgca atgagctatg attgcaccac tgcagtccag cttgtgtgac
1561 agagcaagag tgtttcaaat gaacctagcg tcagatattt actttctgta ttacagagga
1621 ctgaaagcta gctaaataat acttttcagt gtacctgggt tccagagata aaattggtaa
1681 actaaccttt gctccttact tgggctttta gtttatactt cataagacca tggaagcaaa
1741 atttaggtat ctgacccttc tgcacaattt aggaccccgt gtgtgtttgg cctacctatt
1801 cgagttcaat tgaatctttc tgagcatcta tggtgtgcca ggcactctcc taaatgggaa
1861 tacaatatta atccagatac ataaagtctc tatccaaaag gagcttcaag ttggcttggg
1921 caaagaatac atgtcataat ggactgttta tataaatgat gggaaagggt tggggttagg
1981 gtgtgagatt actttagaac gtgttattta aaaacagtat gaatgaagga cattgtaagt
2041 ccggtttttt attatatcat ggtcatatac tcctgttcct gtcagttttt cctgcttcct
2101 ttctttcacc aagatcactc ctttccttct cagatcacca agtcctccta gctatagaga
2161 gggccttcta ttcctctcca cctaaactta tataagctac tgttttcctc atacagacat
2221 gttaatgaaa atgaatttct acaggatctc cagtccattg aaatacatta atttttgagt
2281 ctcttcacac atttttattt cctagattta agtcttgatt gcaatcacat acaactagta
2341 tttcttggaa taaaacagca atcacaaaaa tcataaatat cacattgttt aaaaaaattt
2401 attatttgat gttgaggact ccatcctgat ttcaatgaat taattcattt gttccctttt
2461 aaaatgtcat ctgtgttatt tatgtgtata aattttcaat aattgtttct caatatagag
2521 taaatgatac agctccatag aaggcctgta agatttttga aattaaaata agtttttaaa
2581 taaaatatgc tgttatgatc attgaagttg ataataaaat tattccattg attctgtttc
2641 tcccaagaac caccatttaa tcatgaaagc tagctaagta atatttttca gagttcgtga
2701 gttccagaag taaaattctt taagctaaac agcttgtaaa gtaacttttg ctttataatt
2761 attataattt tgggtgttat ttatgcaaac tcaaatcaat gtactcataa tcaaaacatt
2821 gacatgcaaa cttatgtatt aagcaaaata aaatatacaa gtgtgataaa aaaagaaaaa
2881 aaaa
//