LOCUS BC034411 1905 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens immunoglobulin superfamily, member 11, mRNA (cDNA
clone MGC:35227 IMAGE:5172176), complete cds.
ACCESSION BC034411
VERSION BC034411.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1905)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1905)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: h Column: 16.
FEATURES Location/Qualifiers
source 1..1905
/db_xref="H-InvDB:HIT000042127"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35227 IMAGE:5172176"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1905
/gene="IGSF11"
/gene_synonym="BT-IgSF"
/gene_synonym="CXADRL1"
/gene_synonym="Igsf13"
/gene_synonym="MGC35227"
/gene_synonym="VSIG3"
/db_xref="GeneID:152404"
/db_xref="HGNC:HGNC:16669"
/db_xref="MIM:608351"
CDS 175..1467
/gene="IGSF11"
/gene_synonym="BT-IgSF"
/gene_synonym="CXADRL1"
/gene_synonym="Igsf13"
/gene_synonym="MGC35227"
/gene_synonym="VSIG3"
/codon_start=1
/product="immunoglobulin superfamily, member 11"
/protein_id="AAH34411.1"
/db_xref="GeneID:152404"
/db_xref="HGNC:HGNC:16669"
/db_xref="MIM:608351"
/translation="MSLVELLLWWNCFSRTGVAASLEVSESPGSIQVARGQTAVLPCT
FTTSAALINLNVIWMVTPLSNANQPEQVILYQGGQMFDGAPRFHGRVGFTGTMPATNV
SIFINNTQLSDTGTYQCLVNNLPDIGGRNIGVTGLTVLVPPSAPHCQIQGSQDIGSDV
ILLCSSEEGIPRPTYLWEKLDNTLKLPPTATQDQVQGTVTIRNISALSSGLYQCVASN
AIGTSTCLLDLQVISPQPRNIGLIAGAIGTGAVIIIFCIALILGAFFYWRSKNKEEEE
EEIPNEIREDDLPPKCSSAKAFHTEISSSDNNTLTSSNAYNSRYWSNNPKVHRNTESV
SHFSDLGQSFSFHSGNANIPSIYANGTHLVPGQHKTLVVTANRGSSPQVMSRSNGSVS
RKPRPPHTHSYTISHATLERIGAVPVMVPAQSRAGSLV"
BASE COUNT 586 a 455 c 429 g 435 t
ORIGIN
1 ccgcagtgtg tgagaaagag gccctctctc agatgaatgg ataaagaaaa tgcaggacat
61 atggggggag gagccaagat ggccgaatag gaacagctcc ggtctacagc tcccagtgtg
121 agcgacacag aagacaggtg atttctgcat ttccatctga ggcaagaaga ataaatgtct
181 ctggtggaac ttttgctctg gtggaactgc ttttctagaa ctggtgttgc agcatccctg
241 gaagtgtcag agagccctgg gagtatccag gtggcccggg gtcagacagc agtcctgccc
301 tgcactttca ctaccagcgc tgccctcatt aacctcaatg tcatttggat ggtcactcct
361 ctctccaatg ccaaccaacc tgaacaggtc atcctgtatc agggtggaca gatgtttgat
421 ggtgcccccc ggttccacgg tagggtagga tttacaggca ccatgccagc taccaatgtc
481 tctatcttca ttaataacac tcagttatca gacactggca cctaccagtg cctggtcaac
541 aaccttccag acataggggg caggaacatt ggggtcaccg gtctcacagt gttagttccc
601 ccttctgccc cacactgcca aatccaagga tcccaggata ttggcagcga tgtcatcctg
661 ctctgtagct cagaggaagg cattcctcga ccaacttacc tttgggagaa gttagacaat
721 accctcaaac tacctccaac agctactcag gaccaggtcc agggaacagt caccatccgg
781 aacatcagtg ccctgtcttc aggtttgtac cagtgcgtgg cttctaatgc tattggaacc
841 agcacctgtc ttctggatct ccaggttatt tcaccccagc ccaggaacat tggactaata
901 gctggagcca ttggcactgg tgcagttatt atcatttttt gcattgcact aattttaggg
961 gcattctttt actggagaag caaaaataaa gaggaggaag aagaagaaat tcctaatgaa
1021 ataagagagg atgatcttcc acccaagtgt tcttctgcca aagcatttca cactgagatt
1081 tcctcctcgg acaacaacac actaacctct tccaatgcct acaacagtcg atactggagc
1141 aacaatccaa aagttcatag aaacacagag tcagtcagcc acttcagtga cttgggccaa
1201 tctttctctt tccactcagg caatgccaac ataccatcca tttatgctaa tgggacccat
1261 ctggtcccgg gtcaacataa gactctggta gtgacagcca acagagggtc atcaccacag
1321 gtgatgtcca ggagcaatgg ctcagtcagt aggaagcctc ggcctccaca cactcattcc
1381 tacaccatca gccacgcaac actggaacga attggtgcag tacctgtcat ggtaccagcc
1441 cagagtcggg ccgggtcctt ggtataggac atgaggaaat gttgtgttca gaaatgaata
1501 aatggaatgc cctcatacaa gggggagggt ggggtgggga gtgctgggaa agaaacactt
1561 ccttataatt atattagtaa aatgcacaaa gaagaaggca gtgctgttac ttggccacta
1621 agatgtgtaa aatggactga aatgctccat catgaagact tgcttcccca ccaaagatgt
1681 cctgggattc tgctggatct caaagatgtg ccaagccaag gaaaaagata caagagcaga
1741 atagtactta aaatccaaac tgccgcccag atgggcttgt tcttcatgcc taacttaata
1801 atttttaaga gattaaagtg ccagatggag tttaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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