LOCUS BC034385 1605 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ring finger protein 175, mRNA (cDNA clone MGC:35342
IMAGE:5180678), complete cds.
ACCESSION BC034385
VERSION BC034385.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1605)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1605)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: b Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734858.
FEATURES Location/Qualifiers
source 1..1605
/db_xref="H-InvDB:HIT000042115"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35342 IMAGE:5180678"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1605
/gene="RNF175"
/gene_synonym="FLJ34190"
/db_xref="GeneID:285533"
/db_xref="HGNC:HGNC:27735"
CDS 375..1361
/gene="RNF175"
/gene_synonym="FLJ34190"
/codon_start=1
/product="ring finger protein 175"
/protein_id="AAH34385.1"
/db_xref="GeneID:285533"
/db_xref="HGNC:HGNC:27735"
/translation="MAAGTAARKAAPVLEAPPQQEQLSHTKLSAEDTWNLQQERMYKM
HRGHDSMHVEMILIFLCVLVIAQIVLVQWRQRHGRSYNLVTLLQMWVVPLYFTIKLYW
WRFLSMWGMFSVITSYILFRATRKPLSGRTPRLVYKWFLLIYKLSYAFGVVGYLAIMF
TMCGFNLFFKIKARDSMDFGIVSLFYGLYYGVMGRDFAEICSDYMASTIGFYSVSRLP
TRSLSDNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYC
KEKVDLKRMISNPWERTHFLYGQILDWLRYLVAWQPVVIGIVQGINYSLGLE"
BASE COUNT 399 a 383 c 433 g 390 t
ORIGIN
1 ccagtcctgc cgcccggtaa caaaaccggg gttcccgcca cacgcacccg gtagggctca
61 ggacgcttta tcggcgacaa tggctggctg aatgggaggc ctgaggtcct gaaggaaccg
121 ggggtgctgg cgaccgggac ctcgaggccg ctgctgggga ggacgctggc cagcgtgcag
181 ggggcggagg cggggcgtgc cgggaggctc ccatctcccg ccccgcacaa cccgggcagg
241 gccgccgctc cgccgccgcc gcagatccgg ctctcaccct cggctcccga ggccccgcgg
301 cgcctccttc tgcggactct gcgggaccct ccccggcagg cgctgtgccc tggagaaggc
361 acagtggctc aggcatggcc gcggggacgg cggcgcggaa ggcagcgccg gtgctggagg
421 cccccccgca gcaggagcag ctctctcata caaagctttc tgcagaagac acatggaacc
481 tgcagcagga gaggatgtac aagatgcacc ggggccacga ttccatgcac gtggaaatga
541 tcttgatctt cctctgcgtt ctggtcattg cccagatagt gctggttcag tggagacaga
601 ggcatggccg atcctacaat ctggtgacct tgttgcagat gtgggttgtc cccttatatt
661 tcacgataaa attatactgg tggcggtttc tgtctatgtg ggggatgttc tccgttatta
721 ccagttacat cctcttcaga gctacccgaa aacccctctc aggaaggaca ccacgattgg
781 tctacaaatg gtttcttttg atctacaaac tcagctatgc atttggtgtt gtgggttact
841 tggcgatcat gtttacaatg tgtggattca atctgttttt caaaatcaaa gctagagatt
901 ccatggattt tggcattgtg tctttgttct acggcctcta ctatggagta atggggagag
961 actttgccga gatctgctca gactacatgg cttccactat agggttctac agtgtcagcc
1021 ggttgcctac aaggagctta tcggacaata tctgtgcagt ctgtgggcag aagatcattg
1081 tggagcttga tgaagaaggg ctcattgaaa acacctacca gctttcctgt aatcatgtct
1141 ttcatgaatt ctgcatccga ggttggtgta tcgttgggaa aaagcagact tgcccttact
1201 gcaaagagaa agttgatttg aagaggatga tcagtaatcc ctgggagcgc acacattttc
1261 tgtatggaca aatcctggat tggcttcgtt atttggtggc ctggcaacct gtggtgatag
1321 gaatagttca aggcattaac tattcactag ggctggaata ggacagcaga ccccagaagc
1381 aacatactgc atggttgaaa tccttggtcc aacatttaat attaattttt ttaattttag
1441 agatgatccc aagtgtttag aaaactaagt aaactttgtt gtcaagcaat ttgtccatgt
1501 ggaaagaatt taaagagaag ctgaacaatg gaataaacaa ataaagcatg ttttttcatc
1561 tttcccatta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//