LOCUS BC034232 2309 bp mRNA linear HUM 19-JUN-2008
DEFINITION Homo sapiens family with sequence similarity 171, member A1, mRNA
(cDNA clone IMAGE:5276340), partial cds.
ACCESSION BC034232
VERSION BC034232.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2309)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2309)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: k Column: 4.
FEATURES Location/Qualifiers
source 1..2309
/db_xref="H-InvDB:HIT000093363"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5276340"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2309
/gene="FAM171A1"
/db_xref="GeneID:221061"
/db_xref="HGNC:HGNC:23522"
CDS <1..1024
/gene="FAM171A1"
/codon_start=2
/product="FAM171A1 protein"
/protein_id="AAH34232.1"
/db_xref="GeneID:221061"
/db_xref="HGNC:HGNC:23522"
/translation="PTSFPRPGQLICCSSVDQVNDSVYRKVLPALVIPAHYMKLPRDH
SYVSQPLVVPADQQLEIERLQAELSNPHAGIFPHPSSQIQPQPLSSQAISQQHLQDAG
TREWSPQNASMSESLSIQASLNDAALAQMNSEVQLLTEKALMELGGGKPLPHPRAWFV
SLDGRSNAHVRHSYIDLQRAGRNGSNDASLDSGVDMNEPKSARKGRGDALSLQQNYPP
VQEHQQKEPRAPDSTAYTQLVYLDDVEQSGSECGTTVCTPEDSALRCLLEGSSRRSGG
QLPSLQEETTRRTADAPSEPAASPHQRRSAHEEEEDDDDDDQGEDKKSPWQKREERPL
MAFNIK"
BASE COUNT 574 a 576 c 575 g 584 t
ORIGIN
1 acctacgtcc ttcccacggc ccggccagtt aatctgctgc agttctgtcg accaggtcaa
61 tgacagcgtt tacaggaaag tactgcctgc cttggtcatc ccggctcatt atatgaaact
121 ccccagggac cactcctatg tcagccagcc cctcgtcgtc ccggctgatc agcagcttga
181 gatagaaaga ctacaggctg agctgtccaa tccccatgcc gggatcttcc cacacccgtc
241 ctcacagatc cagccccagc ccctgtcttc ccaggccatc tctcagcagc acctgcagga
301 tgcgggcacc cgggagtgga gccctcagaa cgcatccatg tcggagtctc tctccatcca
361 agcttccctg aacgacgcgg ctttggctca gatgaacagt gaggtgcagc tcctgactga
421 aaaggccctg atggagcttg ggggtgggaa gccgcttccg cacccccggg cgtggttcgt
481 ctccttggat ggcaggtcca acgctcacgt tagacattca tacattgatc tccaaagagc
541 tggaaggaac ggaagtaatg atgccagttt ggactctggc gtagatatga atgaaccaaa
601 atcagcccgg aagggaaggg gagatgcttt gtctctgcag cagaactacc cgcccgtcca
661 agagcaccag cagaaagagc ctcgagcccc agacagcacg gcctacacgc agctcgtgta
721 cctggatgac gtggaacaga gtggtagcga atgtgggacc acggtctgta cccccgagga
781 cagtgccctg cgatgcttgt tggaggggtc gagtcggaga agtggtggcc agctgcccag
841 cctgcaggag gagacgacca gacggactgc ggatgccccc tcggagccag cagccagccc
901 ccaccagaga agatctgccc acgaggaaga ggaagacgat gatgatgatg accaaggaga
961 agacaagaaa agcccctggc agaaacggga ggagaggccc ctgatggcgt ttaacattaa
1021 atgagctatc gcagacccac ctgactgtgg aatataaaat tgccaaatat cctttctcat
1081 ggaagcgcgt acccgttcgt ggaggaaacg gaacggcagc ccagccgtgg gacggacgtg
1141 gacgtttact gcattcctgt ttgccgtgta aatgttagaa aggaattaaa gttattactc
1201 ggaataaagg atgactttgg cggatgtcgc ccctgcaagg aggtggctga aagtggtgtc
1261 cagatgtcct tccgaggact cggcgtatcc gccgccaggg acattaagaa accgcacgtg
1321 atgtcgctat gctctaacga tcacctcagt tctccctagg attctgggaa cagatgaaac
1381 tttttgcatc gcttgagtca tttttatcac aataatccta ctgtgaagct gtcgttgaga
1441 acttaggttg gcacgtagcg tctcaaggta tgcgttctct caaaggaaag ctatgcatcg
1501 ctgcttcgtt gtctgatttt gcttagattt tgctttggtt aggttgcgtt ttggggtttg
1561 cctttttttg ttgtcgctta aatgcaattt ggttgtaaag atttgattcc tttgtgttca
1621 tctgttccgc ttctcagcgg tccatctcag cgtctccctt caggaaccgc tgagtgtcct
1681 ctcttaacat ccaagccttt taatgaaatc gtactgaaat ctgtatcagc taagagtcct
1741 ccaatcctgg tcccattaac tccaagtgcc tttttgacag tgacaacaga cagtccctcg
1801 ctttttgttg ttgtttgttt tcttaacccc tttaatggaa ctgcctggat tttatacagt
1861 tattaaagga tgtctctttt gctttaaact gcatgctgcc aagtgccatt tggggtcagc
1921 atcctcgttt caacacagtg tgctctctag ttatcatgtg taacgtgggt tctgtttagc
1981 gaagatagac tagaggacac gttagagatg cccttccctg ctccatccct gtggcaccat
2041 tatggttttt ttggctgttt gtatatacgg ttacgtatta actctggaat cctatgggct
2101 catcttgctc acccaatgtg ggagtctggt ttgagcaagc gagctgaatg tgactattaa
2161 aaaaaattta aaaaaaaaaa agaaaatctt atgtactatc caaaagtgcc agaatgactc
2221 ttctgtgcat tcttcttaaa gagctgcttg gttatccaaa aatgaaaatt caaaataaac
2281 tctgaagaaa aggaaaaaaa aaaaaaaaa
//