LOCUS BC034224 3197 bp mRNA linear HTC 29-AUG-2005
DEFINITION Homo sapiens neuropeptide Y receptor Y5, mRNA (cDNA clone
IMAGE:4838926), with apparent retained intron.
ACCESSION BC034224
VERSION BC034224.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3197)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3197)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: c Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3197
/db_xref="H-InvDB:HIT000093358"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4838926"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 933 a 594 c 705 g 965 t
ORIGIN
1 ccctgggagc ccgcacccgt ctctggtgcc agggcgttgt cgggggtccc aagagagcgg
61 ggtggggaag gtgaagggag cgcggctgga aaaatgggga ttagggtggc ggaacaggca
121 cttgtcagga gtgaagagac agcggagagg gtactgggct gaattctttc gtgccgagca
181 ggtccctccg gttcccaact cacccgggtg gagcaggcgc gggccgaacc cgggaggaga
241 gtgtcgggga tccgcgaagg agcctcctgg ggatggggcg ggggatggac aaagcgctgc
301 ccccggctgg acgcgctctg gctgcagccc ggctggcatc cggagctggg aacagcagcc
361 cgcggggtgc ccgggtcagg gctcaaccct agcgggtctc tggcgaggcc gggggcgcag
421 cccgcggggc gccactcagg ccgtccagct gccgcgcggt ccagcgctga cccgagcccg
481 ggaggcagct gcgctctaag gtttgcgctc ctgtttgcga ggtgtcttca tataacaaat
541 gcgagcaata acaaacatcc atagaactcg aattccagaa acgggaattc ttttttccaa
601 gttcacagac ctttagttaa tcttttaaag gaactgaggc gttgtgttgg accaaagcca
661 aaacgatttt accttagacc atggaaaata gcctaaggct ctttcagcag aattttgcag
721 tccgaatgca attttagatt tcagatttct caagggaaga gaaactctgc tgttagaatt
781 tggaagggag ggtggtgcat gcctgtgtgt ttgtcagctg agcagagctg tatttatctt
841 tccaattcaa attgtgccag attctggctt taagaacaaa ccatgggaat atttgagaac
901 atggaatcat gctgctgttc cacgatcaca gcaaaacaga caatagttga tattgtatca
961 ttgcaggagg aaaaagaatt acatatattt tattcttttg tgtgattgtc atcctttgtg
1021 aaaagaatga tgtgtatttt cataaagcaa aaaattattc aaacaaagaa accttattta
1081 aatgtacaag tcagactttt aatatccttt gaattccctg cagttcctcc tattattctt
1141 gagaactatc tactttctta aaatacttaa aatctattca gaaggtttca tttgtctagg
1201 tgtcagatat agaagagttt ataagaaaat tccagtaaac ctttaaaaag atattatttt
1261 ttataagttg ccatagttta ataaagaact tttatttttc acacttttta ctcagagatt
1321 aaagttctgt gtttcagcct ggaaattctg atggtgggag atacaactaa tacaaaagag
1381 aatgagtaaa tatagtaatt aggtctgctc attgtgtttt tcaggaaaaa ggaagggaaa
1441 gggtgttaca aggaaaggct atcggtaaca actgacctgc cacaaagtta gaagaaagga
1501 ttgattcaag aaagactata atatggattt agagctcgac gagtattata acaagacact
1561 tgccacagag aataatactg ctgccactcg gaattctgat ttcccagtct gggatgacta
1621 taaaagcagt gtagatgact tacagtattt tctgattggg ctctatacat ttgtaagtct
1681 tcttggcttt atggggaatc tacttatttt aatggctctc atgaaaaagc gtaatcagaa
1741 gactacggta aacttcctca taggcaatct ggccttttct gatatcttgg ttgtgctgtt
1801 ttgctcacct ttcacactga cgtctgtctt gctggatcag tggatgtttg gcaaagtcat
1861 gtgccatatt atgccttttc ttcaatgtgt gtcagttttg gtttcaactt taattttaat
1921 atcaattgcc attgtcaggt atcatatgat aaaacatccc atatctaata atttaacagc
1981 aaaccatggc tactttctga tagctactgt ctggacacta ggttttgcca tctgttctcc
2041 ccttccagtg tttcacagtc ttgtggaact tcaagaaaca tttggttcag cattgctgag
2101 cagcaggtat ttatgtgttg agtcatggcc atctgattca tacagaattg cctttactat
2161 ctctttattg ctagttcagt atattctgcc cttagtttgt cttactgtaa gtcatacaag
2221 tgtctgcaga agtataagct gtggattgtc caacaaagaa aacagacttg aagaaaatga
2281 gatgatcaac ttaactcttc atccatccaa aaagagtggg cctcaggtga aactctctgg
2341 cagccataaa tggagttatt cattcatcaa aaaacacaga agaagatata gcaagaagac
2401 agcatgtgtg ttacctgctc cagaaagacc ttctcaagag aaccactcca gaatacttcc
2461 agaaaacttt ggctctgtaa gaagtcagct ctcttcatcc agtaagttca taccaggggt
2521 ccccacttgc tttgagataa aacctgaaga aaattcagat gttcatgaat tgagagtaaa
2581 acgttctgtt acaagaataa aaaagagatc tcgaagtgtt ttctacagac tgaccatact
2641 gatattagta tttgctgtta gttggatgcc actacacctt ttccatgtgg taactgattt
2701 taatgacaat cttatttcaa ataggcattt caagttggtg tattgcattt gtcatttgtt
2761 gggcatgatg tcctgttgtc ttaatccaat tctatatggg tttcttaata atgggattaa
2821 agctgattta gtgtccctta tacactgtct tcatatgtaa taattctcac tgtttaccaa
2881 ggaaagaaca aatgctgggg tcatataaaa tatatttatg ataactattt acatataata
2941 aatagaaatt ttgttaacat ggaatttaat ttatgtgaaa gagttctgga ttcaaatgtc
3001 agttcataat atatggaaga taattttatg tgttatagta ggattaattt atttagttgt
3061 gcagtcagtg tcaatccaat ctgtaatttc actttagaag gttgtattac cttccacttc
3121 catgttgtct tataaacaaa tgaattgtat tttttgttga aagtaaaagt tatatctaac
3181 caaaaaaaaa aaaaaaa
//