LOCUS BC034043 2366 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens KH domain containing, RNA binding, signal transduction
associated 2, mRNA (cDNA clone MGC:26664 IMAGE:4796658), complete
cds.
ACCESSION BC034043
VERSION BC034043.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2366)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2366)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: f Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749380.
FEATURES Location/Qualifiers
source 1..2366
/db_xref="H-InvDB:HIT000042057"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26664 IMAGE:4796658"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2366
/gene="KHDRBS2"
/gene_synonym="bA535F17.1"
/gene_synonym="MGC26664"
/gene_synonym="SLM-1"
/gene_synonym="SLM1"
/db_xref="GeneID:202559"
/db_xref="HGNC:HGNC:18114"
CDS 280..1329
/gene="KHDRBS2"
/gene_synonym="bA535F17.1"
/gene_synonym="MGC26664"
/gene_synonym="SLM-1"
/gene_synonym="SLM1"
/codon_start=1
/product="KH domain containing, RNA binding, signal
transduction associated 2"
/protein_id="AAH34043.1"
/db_xref="GeneID:202559"
/db_xref="HGNC:HGNC:18114"
/translation="MEEEKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGKKED
EEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSIL
GKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLV
PDYNDEIRQEQLRELSYLNGSEDSGRGRGIRGRGIRIAPTAPSRGRGGAIPPPPPPGR
GVLTPRGSTVTRGALPVPPVARGVPTPRARGAPTVPGYRAPPPPAHEAYEEYGYDDGY
GGEYDDQTYETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAPEEWATTSSSLKAPPQ
RSARGGYREHPYGRY"
BASE COUNT 737 a 448 c 540 g 641 t
ORIGIN
1 gcgtcctgtt cccgcctctc cagttaaggc cactggtgtg agccggggct ctgcgcgagc
61 gagggacgac ggaagggacg ggcaggtgtg ggcgcggggc cacgcagccc gacggcggga
121 gtcgcaggtg ctgggtgcat gggccagtga ggacgcacag agatccctcg ccgcgcggag
181 gaggagcagc gcgggagcca ggcgctgccc caagaccctg cctgcgtccg agcgagcgga
241 acctcgcgct tcgcccgggg acaatccgaa gtccgcgcta tggaagagga gaaatatttg
301 cctgagctga tggcagagaa agatagcctg gatccatctt ttgtgcatgc gtcgcgcctt
361 ttggcagaag aaattgaaaa gtttcaaggt tctgatggaa aaaaggaaga cgaagaaaag
421 aagtatcttg atgtcatcag caacaaaaac ataaagctct cagaaagagt actgattcct
481 gtcaagcagt atccaaagtt caattttgtg gggaaattgc ttggaccaag aggaaactcc
541 ttgaagaggc tacaggaaga aacaggtgct aaaatgtcta tcctgggcaa aggatcaatg
601 agagataaag ctaaggaaga agaactaagg aagagtgggg aagccaaata tgcccacttg
661 agtgatgagc ttcatgtatt aattgaagtg tttgctccac ctggggaagc ttattcacgt
721 atgagtcatg cattggaaga gattaaaaaa ttcctggttc ctgactacaa tgatgaaatt
781 cgtcaggaac aactacgtga attatcttac ttaaatggct cagaggactc tggtcgtggc
841 agaggtatta gaggcagagg gatcagaata gctcccacag ctccttcaag gggccgtggg
901 ggtgccattc ctcctccccc accacctgga cgaggtgttc tcacccctcg gggaagcact
961 gtaacccgtg gagcgcttcc agtgccacct gtagcaagag gtgtccctac ccctcgagcc
1021 cggggggcac caacagtgcc aggatacagg gcacctcctc ctccagccca tgaagcttat
1081 gaagaatatg gttatgatga tggctacggg ggtgaatatg atgaccagac ctatgagact
1141 tatgataaca gctacgcgac ccaaacacaa agtgtgcctg aatactatga ctacggtcat
1201 ggagtaagtg aggatgccta tgacagctac gcaccagaag aatgggccac aaccagctct
1261 agcttgaagg caccaccgca aaggtcagcc agagggggat acagggaaca cccctatggt
1321 agatattgaa ggtccttccc acctgtgacc tcacctcaaa gacaattcat agcctgtggt
1381 ctccacataa acagcaacaa gacaagtaat agtccttttt ttgtttgttt gtttctattc
1441 tagggataac tgctcatgat tactcccata tatttctagt atttccctct gtactgttgg
1501 cgtgacattg acactagtat tattttacaa aacagactga aaaagacatt agcaagcata
1561 gtctataaac ctttcagtag gatgatattc tcttggttgt ttttcattgt tgtgtgtaat
1621 cttttttttt tctttttctt tttttttttt tgaggaaaag catgaatttg ttaacagatt
1681 ttgagtctca accaactagc agaaactttg tttagggttg ctaaaagact gtaatatgat
1741 ttttgaacta gctgataata aagttgtaga taagatgttt taacctgtct tttaatatct
1801 gttagttaga caaagatgtt tgatattaag tttgtaaatt taattttaat gctgttttaa
1861 tggggttgaa aacaagcagc tactgtatgt atgtagctaa ctgaatttgt tcagtgtttt
1921 aacctgtatt tgttaaaaaa gaaaaaaaaa cacacataaa gttccatgtg taagcttctc
1981 taaataggaa accacaattt gtcaaatatg tttgccataa tttgtcaata aagctgaaaa
2041 cttttgtaaa aattaaattt ggaattactt gttttctagc tttaaatgcc tgctttattt
2101 cttcttaaga gatgcctaaa atgttttcta tttaaaaatt acaaaaatga acccaagtct
2161 gttttaagat atttgtgtaa tacttaaaaa tgtattaata acttatggtt gttaaataat
2221 ttaaaagtta acaaactaaa ctgttacatg aatcatggtt agtaaacact aatgtataac
2281 atgttaatgg aaaaaaatgg atttagaata ataaatggat tttaaactat aaaaaaaaaa
2341 aaaaaaaaaa aaaaaaaaaa aaaaaa
//