LOCUS BC034018 4115 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens neuroligin 4, X-linked, mRNA (cDNA clone MGC:22376 IMAGE:4702963), complete cds. ACCESSION BC034018 VERSION BC034018.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4115) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4115) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 37 Row: b Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31317255. FEATURES Location/Qualifiers source 1..4115 /db_xref="H-InvDB:HIT000042042" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22376 IMAGE:4702963" /tissue_type="Lung" /clone_lib="NIH_MGC_77" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..4115 /gene="NLGN4X" /gene_synonym="ASPGX2" /gene_synonym="AUTSX2" /gene_synonym="HLNX" /gene_synonym="HNLX" /gene_synonym="KIAA1260" /gene_synonym="MGC22376" /gene_synonym="NLGN" /db_xref="GeneID:57502" /db_xref="HGNC:HGNC:14287" /db_xref="MIM:300427" CDS 431..2881 /gene="NLGN4X" /gene_synonym="ASPGX2" /gene_synonym="AUTSX2" /gene_synonym="HLNX" /gene_synonym="HNLX" /gene_synonym="KIAA1260" /gene_synonym="MGC22376" /gene_synonym="NLGN" /codon_start=1 /product="neuroligin 4, X-linked" /protein_id="AAH34018.1" /db_xref="GeneID:57502" /db_xref="HGNC:HGNC:14287" /db_xref="MIM:300427" /translation="MSRPQGLLWLPLLFTPVCVMLNSNVLLWLTALAIKFTLIDSQAQ YPVVNTNYGKIRGLRTPLPNEILGPVEQYLGVPYASPPTGERRFQPPEPPSSWTGIRN TTQFAAVCPQHLDERSLLHDMLPIWFTANLDTLMTYVQDQNEDCLYLNIYVPTEDDIH DQNSKKPVMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINYRLGILGFLSTGDQAA KGNYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTLSHYSEGLFQKA IIQSGTALSSWAVNYQPAKYTRILADKVGCNMLDTTDMVECLRNKNYKELIQQTITPA TYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVDGIVDNEDGVTP NDFDFSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADKENPETRRKTLVALFTDHQWV APAVATADLHAQYGSPTYFYAFYHHCQSEMKPSWADSAHGDEVPYVFGIPMIGPTELF SCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWSKYNPKD QLYLHIGLKPRVRDHYRATKVAFWLELVPHLHNLNEIFQYVSTTTKVPPPDMTSFPYG TRRSPAKIWPTTKRPAITPANNPKHSKDPHKTGPEDTTVLIETKRDYSTELSVTIAVG ASLLFLNILAFAALYYKKDKRRHETHRRPSPQRNTTNDIAHIQNEEIMSLQMKQLEHD HECESLQAHDTLRLTCPPDYTLTLRRSPDDIPLMTPNTITMIPNTLTGMQPLHTFNTF SGGQNSTNLPHGHSTTRV" BASE COUNT 1139 a 1082 c 926 g 968 t ORIGIN 1 agaaggggaa ggctcctggg ctttcaatac atcctcctga atcatacctc gtttcgggtt 61 ccctagaaaa atctggacgt gtaaaaagaa ctcttaacgg ccgatgcagc tcttccaaag 121 ctaaggctgc cttggagttt tcataagaaa ttgtccctgg aggtgttgga tgatcacagc 181 ttccttggag cattgcagtt gctggaatcc agtttcagga ttaagggagg gctgcctcct 241 tgcaatgggc tgccaagaaa acggctgtgc ttgttcttaa cctcaggctc tgtctgtgat 301 cagtctgaga gtctctccca ggtctactgc tccctggaaa gccctatctc tctgcaggct 361 cgcctctggg ctttgtctcc ttggagccac atcactggga cagctgtgga tgtggatgca 421 gatttgaacc atgtcacggc cccagggact gctatggctt cctttgttgt tcaccccggt 481 ctgcgtcatg ttaaactcca atgtcctcct gtggttaact gctcttgcca tcaagttcac 541 cctcattgac agccaagcac agtatccagt tgtcaacaca aattatggca aaatccgggg 601 cctaagaaca ccgttaccca atgagatctt gggtccagtg gagcagtact taggggtccc 661 ctatgcctca ccccccactg gagagaggcg gtttcagccc ccagaacccc cgtcctcctg 721 gactggcatc cgaaatacta ctcagtttgc tgctgtgtgc ccccagcacc tggatgagag 781 atccttactg catgacatgc tgcccatctg gtttaccgcc aatttggata ctttgatgac 841 ctatgttcaa gatcaaaatg aagactgcct ttacttaaac atctacgtgc ccacggaaga 901 tgatattcat gatcagaaca gtaagaagcc cgtcatggtc tatatccatg ggggatctta 961 catggagggc accggcaaca tgattgacgg cagcattttg gcaagctacg gaaacgtcat 1021 tgtgatcacc attaactacc gtctgggaat actagggttt ttaagtaccg gtgaccaggc 1081 agcaaaaggc aactatgggc tcctggatca gattcaagca ctgcggtgga ttgaggagaa 1141 tgtgggagcc tttggcgggg accccaagag agtgaccatc tttggctcgg gggctggggc 1201 ctcctgtgtc agcctgttga ccctgtccca ctactcagaa ggtctcttcc agaaggccat 1261 cattcagagc ggcaccgccc tgtccagctg ggcagtgaac taccagccgg ccaagtacac 1321 tcggatattg gcagacaagg tcggctgcaa catgctggac accacggaca tggtagaatg 1381 cctgcggaac aagaactaca aggagctcat ccagcagacc atcaccccgg ccacctacca 1441 catagccttc gggccggtga tcgacggcga cgtcatccca gacgaccccc agatcctgat 1501 ggagcaaggc gagttcctca actacgacat catgctgggc gtcaaccaag gggaaggcct 1561 gaagttcgtg gacggcatcg tggataacga ggacggtgtg acgcccaacg actttgactt 1621 ctccgtgtcc aacttcgtgg acaaccttta cggctaccct gaagggaaag acactttgcg 1681 ggagactatc aagttcatgt acacagactg ggccgataag gaaaacccgg agacgcggcg 1741 gaaaaccctg gtggctctct ttactgacca ccagtgggtg gcccccgccg tggccaccgc 1801 cgacctgcac gcgcagtacg gctcccccac ctacttctat gccttctatc atcactgcca 1861 aagcgaaatg aagcccagct gggcagattc ggcccatggt gatgaggtcc cctatgtctt 1921 cggcatcccc atgatcggtc ccaccgagct cttcagttgt aacttttcca agaacgacgt 1981 catgctcagc gccgtggtca tgacctactg gacgaacttc gccaaaactg gtgatccaaa 2041 tcaaccagtt cctcaggata ccaagttcat tcacacaaaa cccaaccgct ttgaagaagt 2101 ggcctggtcc aagtataatc ccaaagacca gctctatctg catattggct tgaaacccag 2161 agtgagagat cactaccggg caacgaaagt ggctttctgg ttggaactcg ttcctcattt 2221 gcacaacttg aacgagatat tccagtatgt ttcaacaacc acaaaggttc ctccaccaga 2281 catgacatca tttccctatg gcacccggcg atctcccgcc aagatatggc caaccaccaa 2341 acgcccagca atcactcctg ccaacaatcc caaacactct aaggaccctc acaaaacagg 2401 gcctgaggac acaactgtcc tcattgaaac caaacgagat tattccaccg aattaagtgt 2461 caccattgcc gtcggggcgt cgctcctctt cctcaacatc ttagcttttg cggcgctgta 2521 ctacaaaaag gacaagaggc gccatgagac tcacaggcgc cccagtcccc agagaaacac 2581 cacaaatgat atcgctcaca tccagaacga agagatcatg tctctgcaga tgaagcagct 2641 ggaacacgat cacgagtgtg agtcgctgca ggcacacgac acactgaggc tcacctgccc 2701 gccagactac accctcacgc tgcgccggtc gccagatgac atcccactta tgacgccaaa 2761 caccatcacc atgattccaa acacactgac ggggatgcag cctttgcaca cttttaacac 2821 cttcagtgga ggacaaaaca gtacaaattt accccacgga cattccacca ctagagtata 2881 gctttgccct atttcccttc ctatccctct gccctacccg ctcagcaaca tagaagaggg 2941 aaggaaagag agaaggaaag agagagagaa agaaagtctc caaaccagga atgtttttgt 3001 cccactgact taagacaaaa atgcaaaaag gcagtcatcc catcccggca gacccttatc 3061 gttggtgttt tccagtatta caagatcaac ttctgaccct gtgaaatgtg agaagtacac 3121 atttctgtta aaataactgc tttaagatct ctaccactcc aatcgatgtt tagtgtgata 3181 ggacatcacc atttcaaggc cccgggtgtt tccaacgtca tggaagcagc tgacacttct 3241 gaaactcagc caaggacact tgatattttt taattacaat ggaagtttaa acatttcttt 3301 ctgtgccaca caatggatgg ctctccttaa gtgaagaaag agtcaatgag attttgccca 3361 gcacatggag ctgtaatcca gagagaagga aacgtagaaa tttattatta aaagaatgga 3421 ctgtgcagcg aaatctgtac ggttctgtgc aaagaggtgt tttgccagcc tgaactatat 3481 ttaagagact ttgtaaaaaa gaaaaatgta tatagctgtg agtttaaaca aaaaccacaa 3541 acagacaaac aagaaaaaaa gcttttattg gtgttttcac tttgaaagag cttttagcaa 3601 ggttgtgctt ttcattgtgc tctgtacgta tataaatata tatatatata cacacacaca 3661 cacacattag tcatatcacc tctgtttcct ccccaacaaa agaggctttt cttcttaatt 3721 acttgtggta aacaaagaca tgggattttc ttacatgaga ttctcatttg taggaggatg 3781 tgatgtccca cagaagaccc agacggtctg tgtggcctat ttcccccgtc aggttgcaca 3841 ggtgcatgca agagcattct taggagacca ctgttttgaa aaacttttga cttgtacgtg 3901 ttagccttca tgaaattgca gtacagagat gggtccccaa agtggagtgt atttacagct 3961 tgttaaatta gagacatgca cacacaaaga atcagtaggg agaaacaaaa atacaagtcc 4021 cgttctgtag ctctggccct ttgaatatgt ttaggaagag ttgcttccca tttcagggcc 4081 ctgccaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //