LOCUS BC034013 3180 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 1, mRNA (cDNA clone MGC:21456 IMAGE:3451036), complete cds. ACCESSION BC034013 VERSION BC034013.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3180) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3180) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 20 Row: a Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..3180 /db_xref="H-InvDB:HIT000042038" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:21456 IMAGE:3451036" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3180 /gene="ARHGEF1" /gene_synonym="GEF1" /gene_synonym="LBCL2" /gene_synonym="P115-RHOGEF" /gene_synonym="SUB1.5" /db_xref="GeneID:9138" /db_xref="HGNC:HGNC:681" /db_xref="MIM:601855" CDS 21..2804 /gene="ARHGEF1" /gene_synonym="GEF1" /gene_synonym="LBCL2" /gene_synonym="P115-RHOGEF" /gene_synonym="SUB1.5" /codon_start=1 /product="Rho guanine nucleotide exchange factor (GEF) 1" /protein_id="AAH34013.2" /db_xref="GeneID:9138" /db_xref="HGNC:HGNC:681" /db_xref="MIM:601855" /translation="MASLSTWSSPAEPREMEDFARGAASPGPSRPGLVPVSIIGAEDE DFENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSL GPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEVVQS QQVAVGRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLEE MQHTISTDEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKT KKGLSSILDAARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQ DTPGVSLHPLSLDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETESPEP GDEGEPGRSGLELEPEEPPGWRELVPPDTLHSLPKSQVKRQEVISELLVTEAAHVRML RVLHDLFFQPMAECLFFPLEELQNIFPSLDELIEVHSLFLDRLMKRRQESGYLIEEIG DVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKDPRFCAFVQEAESRPRCRR LQLKDMIPTEMQRLTKYPLLLQSIGQNTEEPTEREKVELAAECCREILHHVNQAVRDM EDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKDKAVEVH VLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHKAF YVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKVPAPASRPKPRPSPSSTREP LLSSSENGNGGRETSPADARTERILSDLLPFCRPGPEGQLAATALRKVLSLKQLLFPA EEDNGAGPPRDGDGVPGGGPLSPARTQEIQENLLSLEETMKQLEELEEEFCRLRPLLS QLGGNSVPQPGCT" BASE COUNT 648 a 990 c 1011 g 531 t ORIGIN 1 cttcggttcc ggtggcggcg atggcttctc tttccacctg gagcagccct gcagagccca 61 gggagatgga agacttcgcc cgaggggcgg cctccccagg cccctcccgg cctggcctgg 121 ttcccgtcag catcatcggg gctgaggatg aggattttga gaacgagctg gagacaaact 181 cagaagagca aaacagccag ttccagagcc tggagcaggt gaagcggcgc ccagcccacc 241 tcatggccct cctgcagcac gtggccctgc agtttgagcc aggacccctg ctttgctgtc 301 tgcatgccga catgctgggc tcactgggcc ccaaggaggc caagaaggcc ttcctggact 361 tctaccacag cttcctggag aagacagcgg ttctccgggt gccggtccct cccaacgtcg 421 cctttgaact tgaccgcact agggctgacc tcatctccga ggatgtccag cggcggttcg 481 tgcaggaggt ggtgcaaagc cagcaggtag ccgtgggccg gcagctggag gacttccgtt 541 ccaagcggct catgggcatg acgccctggg agcaggagct ggcccagctg gaggcttggg 601 ttgggcggga ccgagccagc tacgaggccc gggagcggca cgtggcggag cggctgctca 661 tgcacctgga ggagatgcaa cataccatct ctaccgacga agaaaagagt gctgccgtgg 721 tcaacgccat tggcctgtac atgcgccacc ttggggtgcg gaccaagagt ggagacaaga 781 agtcggggag gaacttcttc cggaaaaagg tgatggggaa ccggcggtcg gacgagcctg 841 ccaagaccaa gaaggggctg agcagcatcc tggatgccgc ccgctggaac cggggagagc 901 cccaggttcc agattttcga cacctcaaag cagaggttga tgccgagaag ccaggtgcta 961 cagaccggaa gggaggcgtg gggatgccct ctcgggaccg gaatatcggg gctcctgggc 1021 aggacacccc tggagtctct ctgcaccctc tgtccctgga cagcccagac cgggaaccag 1081 gtgctgacgc ccccctggag ctgggggact catccccgca gggcccaatg agcctggagt 1141 ccttggcgcc cccagagagt accgacgagg gggccgaaac cgagagcccc gagcctggag 1201 atgaggggga gccggggcgg tcgggactgg agcttgaacc agaagagcct cccggctggc 1261 gggaactcgt ccccccagac accctgcaca gcctgcccaa gagccaggtg aagcggcagg 1321 aggtcatcag cgagctgctg gtgacagagg cggcccacgt gcgcatgctg cgggtgctgc 1381 acgacctctt cttccagccc atggcagaat gcctgttctt ccccttggag gagctgcaga 1441 acatcttccc cagcctggac gagctcatcg aggtgcattc cctgttcctc gatcgcctga 1501 tgaagcggag gcaggagagt ggctacctca tcgaggagat cggagacgtg ctgctggccc 1561 ggtttgatgg tgctgagggc tcctggttcc agaaaatctc ctcccgcttc tgcagccgcc 1621 agtcatttgc cttagagcag ctcaaagcca agcaacgcaa ggaccctcgg ttctgtgcct 1681 tcgtgcagga agctgagagc cgcccgcggt gccgccgcct gcagctgaag gacatgatcc 1741 ccacggagat gcagcggctg accaagtacc ccctgctcct gcagagcatc gggcagaaca 1801 cagaagagcc cacagaacgg gagaaagtgg agctggcagc cgagtgctgc cgggaaattc 1861 tacaccacgt caaccaagcc gtgcgtgaca tggaggacct gctgaggctc aaggactatc 1921 agcggcgcct ggacttgtcc caccttcggc agagcagcga ccctatgctg agcgagttca 1981 agaacctgga catcaccaag aagaaattgg tccacgaggg cccactgacg tggcgggtga 2041 ctaaggacaa ggcagtggag gtgcatgtgc tgctgctgga cgacctgctg ctgctgctcc 2101 agcgccagga cgagcggctg ctgctcaagt cccatagccg gacactgacg cccacgcccg 2161 atggcaagac catgctgcgg cccgtgctgc ggctcacctc cgccatgacc cgcgaggtgg 2221 ccaccgatca caaagccttc tacgtccttt ttacctggga ccaggaggcc cagatatacg 2281 agctggtggc acagactgtg tcggagcgga aaaactggtg tgctctcatc actgagactg 2341 ccggatccct gaaagtccct gcccctgcct ctcgccctaa gccccggccc agcccgagca 2401 gcacccgaga acccctcctc agcagctctg agaacggcaa tggtggccga gagacgtctc 2461 cagctgatgc ccggaccgag agaatcctca gtgacctcct gcccttctgc agaccaggcc 2521 ccgagggcca gctcgctgcc acggcccttc ggaaagtgct gtccctgaag cagcttctgt 2581 ttccggcgga ggaagacaat ggggcggggc ctcctcgaga tggggatggg gtcccagggg 2641 gcggccccct gagcccagca cggacccagg aaatccagga gaacctgctc agcttggagg 2701 agaccatgaa gcagctggag gagttggagg aggaattttg ccgcctgaga cccctcctgt 2761 ctcagcttgg ggggaactct gtcccccagc ctggctgcac ttgaggttcc cgcccaggaa 2821 ggccttttgc aagaaggaga ggaatggggg agaggacgtg agggaccacc cccacccaca 2881 cagctgccgc agcatctcac accccgaggg cctgaggaga gggagctgtg ggccacgcct 2941 gggaggggcc cagctggggt tactggcccc gcatgagcct cggccatctc tccctcctgc 3001 cctctgcttg ggggactcag ggctccattc tggagggcac cacggtgacc cgggccatct 3061 cagtattgcc tgtgggggcc acccctccac ccccaccccc aagtgccttc gctctgtttt 3121 tataccctga attggaggtt tattttttaa tatatattat ctaagaaaaa aaaaaaaaaa //