LOCUS       BC033904                4493 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens solute carrier family 6 (neurotransmitter transporter,
            GABA), member 1, mRNA (cDNA clone MGC:33804 IMAGE:5264672),
            complete cds.
ACCESSION   BC033904
VERSION     BC033904.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4493)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 4493)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 47 Row: i Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 40254466.
FEATURES             Location/Qualifiers
     source          1..4493
                     /db_xref="H-InvDB:HIT000042025"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:33804 IMAGE:5264672"
                     /tissue_type="Brain, hippocampus"
                     /clone_lib="NIH_MGC_95"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..4493
                     /gene="SLC6A1"
                     /gene_synonym="GABATHG"
                     /gene_synonym="GABATR"
                     /gene_synonym="GAT1"
                     /db_xref="GeneID:6529"
                     /db_xref="HGNC:HGNC:11042"
                     /db_xref="MIM:137165"
     CDS             380..2179
                     /gene="SLC6A1"
                     /gene_synonym="GABATHG"
                     /gene_synonym="GABATR"
                     /gene_synonym="GAT1"
                     /codon_start=1
                     /product="solute carrier family 6 (neurotransmitter
                     transporter, GABA), member 1"
                     /protein_id="AAH33904.1"
                     /db_xref="GeneID:6529"
                     /db_xref="HGNC:HGNC:11042"
                     /db_xref="MIM:137165"
                     /translation="MATNGSKVADGQISTEVSEAPVANDKPKTLVVKVQKKAADLPDR
                     DTWKGRFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLEC
                     SLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLP
                     WKQCDNPWNTDRCFSNYSMVNTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITL
                     AIAWILVYFCIWKGVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNF
                     RKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFA
                     GFVIFSIVGFMAHVTKRSIADVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLML
                     GIDSQFCTVEGFITALVDEYPRLLRNRRELFIAAVCIISYLIGLSNITQGGIYVFKLF
                     DYYSASGMSLLFLVFFECVSISWFYGVNRFYDNIQEMVGSRPCIWWKLCWSFFTPIIV
                     AGVFIFSAVQMTQLTMGNYVFPKWGQGVGWLMALSSMVLIPGYMAYMFLTLKGSLKQR
                     IQVMVQPSEDIVRPENGPEQPQAGSSTSKEAYI"
BASE COUNT         1048 a         1235 c         1089 g         1121 t
ORIGIN      
        1 agcgggaggg gttgcgggtg agctgcgctg agcccaggag ccgaggagtc gggagcgcag
       61 cgcagcccga gcccgagccc gagcggcccc gcgtcccgag cgcatcggag cggccgagcc
      121 gcccggcgca gcgcctggcc cgggcagcgc agccccggcc gcaggatctc accaaaggtg
      181 gcagaaggag gccttctgga gctgacccac ccccgacgac catcagggtg aggcaactcc
      241 aaggtcctac tctctttctg tgcctgttac ccaccccgtc ctcctagggt gcccttgagc
      301 cgcaaaactg ctgtccacgt ggaccggggg tgacatcgca cgtccatctg ccaggacccc
      361 tgcgtccaaa ttccgagaca tggcgaccaa cggcagcaag gtggccgacg ggcagatctc
      421 caccgaggtc agcgaggccc ctgtggccaa tgacaagccc aaaaccttgg tggtcaaggt
      481 gcagaagaag gcggcagacc tccccgaccg ggacacgtgg aagggccgct tcgacttcct
      541 catgtcctgt gtgggctatg ccatcggcct gggcaacgtc tggaggttcc cctatctctg
      601 cgggaaaaat ggtgggggag ccttcctgat cccctatttc ctgacactca tctttgcggg
      661 ggtcccactc ttcctgctgg agtgctccct gggccagtac acctccatcg gggggctagg
      721 ggtatggaag ctggctccta tgttcaaggg cgtgggcctt gcggctgctg tgctatcatt
      781 ctggctgaac atctactaca tcgtcatcat ctcctgggcc atttactacc tgtacaactc
      841 cttcaccacg acactgccgt ggaaacagtg cgacaacccc tggaacacag accgctgctt
      901 ctccaactac agcatggtca acactaccaa catgaccagc gctgtggtgg agttctggga
      961 gcgcaacatg catcagatga cggacgggct ggataagcca ggtcagatcc gctggccact
     1021 ggccatcacg ctggccatcg cctggatcct tgtgtatttc tgtatctgga agggtgttgg
     1081 ctggactgga aaggtggtct acttttcagc cacatacccc tacatcatgc tgatcatcct
     1141 gttcttccgt ggagtgacgc tgcccggggc caaggagggc atcctcttct acatcacacc
     1201 caacttccgc aagctgtctg actccgaggt gtggctggat gcggcaaccc agatcttctt
     1261 ctcatacggg ctgggcctgg ggtccctgat cgctctcggg agctacaact ctttccacaa
     1321 caatgtctac agggactcca tcatcgtctg ctgcatcaat tcgtgcacca gcatgttcgc
     1381 aggattcgtc atcttctcca tcgtgggctt catggcccat gtcacgaaga ggtccattgc
     1441 tgatgtggcg gcctcaggcc ccgggctggc gttcctggca tacccagagg cggtgaccca
     1501 gctgcctatc tccccactct gggccatcct cttcttctcc atgctgttga tgctgggcat
     1561 tgacagccag ttctgcactg tggagggctt catcacagcc ctggtggatg agtaccccag
     1621 gctcctccgc aaccgcagag agctcttcat tgctgctgtc tgcatcatct cctacctgat
     1681 cggtctctct aacatcactc aggggggtat ttatgtcttc aaactctttg actactactc
     1741 tgccagtggc atgagcctgc tgttcctcgt gttctttgaa tgtgtctcta tttcctggtt
     1801 ttacggtgtc aaccgattct atgacaatat ccaagagatg gttggatcca ggccctgcat
     1861 ctggtggaaa ctctgctggt ctttcttcac accaatcatt gtggcgggcg tgttcatttt
     1921 cagtgctgtg cagatgacgc aactcaccat gggaaactat gttttcccca agtggggcca
     1981 gggtgtgggc tggctgatgg ctctgtcttc catggtcctc atccccgggt acatggccta
     2041 catgttcctc accttaaagg gctccctgaa gcagcgcatc caagtcatgg tccagcccag
     2101 cgaagacatc gttcgcccag agaatggtcc tgagcagccc caggcgggca gctccaccag
     2161 caaggaggcc tacatctagg gtgggggcca ctcaccgacc cgacactctc accccccgac
     2221 ctggctgagt gcgaccacca cttgatgtct gaggatacct tccatctcaa cctacctcga
     2281 gtggcgagtc cagacaccat caccacgcag agaggggagg tgggaggaca gttagacccc
     2341 tgggtgggcc ctgccgtggg caaggatacc cggtggcttc tggcacctgg cgggctggtg
     2401 acctttttaa tccaggcccc atcagcatcc cacgatcggc cttggtaacc gccgcggtag
     2461 atcattttta tcccgccagg gagtgtgatg caggaagacc acatgcgctc ctggctttta
     2521 aacctgttcc tgactgttct cttactgccg aaacccttga ctgttatctc ggactttgca
     2581 ggagttcctt tccctccgaa cgctgctcca tgcacaggaa aagggcattt tgtacaatgg
     2641 ggacttcccg ggaacgcttg ctcttaagta ccagaagccg gcggagctct ggctttcgtg
     2701 tttttggttt tctccttccc aaggcagctg gattgaaaaa acaaaacaaa acaaaaaaac
     2761 ccaggggcgt cagtcgatat tcccagggcc gcttctcctg cagtctgtgg agcgtccttg
     2821 tccccgccgc cggaatgaat gagcattctg cagcccgatg tccctgtccc ctcctcgccg
     2881 ggccattctg attggacctg gcccagtgca atctgtccag acaagccctg cttgctggaa
     2941 aactgccaca agcacaattg atctcttttt atcgccattc caggggcctc aggtcctact
     3001 ggggaaactt cctataccgg agctccagtt tctcttaagc tgcccaattt cacagagtac
     3061 aaaatagttg taggggaaat caaggtgaag gatctgtccg acagtcaaga cggatccaca
     3121 gtaatctttc ggtctcctta aactaccacc ctcgctgcca cccaccccaa gctgctgccg
     3181 cctcaccttc cttgaaattt ctcagcggga gtctcctcac tgccactaaa acccacccag
     3241 cccactaact gaggagctag tgttaatcca gagaaccccc cgcaatgtgc ttccgagatt
     3301 cagactgctt cattgggaag tatgatttgt tcctttctgg aattgggctc cgtggtggcg
     3361 gcggcacttc aagcaaagac agtttcttgc aagctccagt agctccgcgt gtctcatttg
     3421 ccaggaagat gggttcccac gtagcaaatc gtacattgtg ccctgtagct ccttagctag
     3481 ttagctcaca agccgtgttt tatgactaat ccttaataac tatggtaaat aactgtgact
     3541 gtggggtttt taatctcttg tcattctcat ccaaaagtga ccagcatacc agttcttgca
     3601 ataagatatt accctcagaa tattaagcac attattgtag agaaaaaaaa atatgtgtac
     3661 acatatgaac gcacaacatg cacattcatc atcacatgtg gcacgtaagg tctcatttga
     3721 tattgtgtag gaaatctgaa gccttttcct gaggtcatct gtaaaatagt ctcattgcca
     3781 aggcatcccc agtgccagct ggtgaatcca tgatcaaaat gcatacgtat tgttaaatga
     3841 taaggtttag aatgacagga acccatcact gtgtctcatg gtcccacttc cccatctgtg
     3901 tgtgaattcc tttagactaa gggcaggaag acttccagct ttctctttgt tcttcaatgt
     3961 gaaactgaga ccaagtctct ctaagacaaa tgcagtgtat ttaatgtttg taagcaattc
     4021 taagtgagat gtttggcaag aaatccccta actgatttcc atccaaacct accttataga
     4081 gcacaatatt aagtgttgta caattactgt gagaactgtg aatatgtgta actttttttt
     4141 agtatttgcc cggggggaaa aagatattgt attatcatat atgctttttt tgcaataagg
     4201 atttattctc agaacaccaa gtaaatctat ctctatataa aaaatatatg taatatatac
     4261 atattcaaag tatatacaga gcctgtttta aaaaatacag tattatttag taaaattatc
     4321 tgttctatgg accaaatgta aaatatttat aaatgaagat gcattttaaa tgtctataaa
     4381 tggtgtcata actagagcac gggcgttatg taagtttcta agaatttaga ggataaataa
     4441 taaaggttct atgatataca acaaaaaaaa aaaaaagaaa aaaaaaaaaa aaa
//