LOCUS BC033903 3136 bp mRNA linear HUM 22-SEP-2005
DEFINITION Homo sapiens zinc finger, MYM-type 6, mRNA (cDNA clone
IMAGE:5263804), partial cds.
ACCESSION BC033903
VERSION BC033903.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3136)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3136)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: h Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68509915.
FEATURES Location/Qualifiers
source 1..3136
/db_xref="H-InvDB:HIT000093267"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5263804"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..>3136
/gene="ZMYM6"
/gene_synonym="MYM"
/gene_synonym="ZNF198L4"
/db_xref="GeneID:9204"
CDS 211..>3136
/gene="ZMYM6"
/gene_synonym="MYM"
/gene_synonym="ZNF198L4"
/codon_start=1
/product="ZMYM6 protein"
/protein_id="AAH33903.1"
/db_xref="GeneID:9204"
/translation="MKEPLDGECGKAVVPQQELLDKIKEEPDNAQEYGCVQQPKTQES
KLKIGGVSSVNERPIAQQLNPGFQLSFASSGPSVLLPSVPAVAIKVFCSGCKKMLYKG
QTAYHKTGSTQLFCSTRCITRHSSPACLPPPPKKTCTNCSKDILNPKDVITTRFENSY
PSKDFCSQSCLSSYELKKKPVVTIYTKSISTKCSMCQKNADTRFEVKYKNVVHGLCSD
ACFSKFHSTNNLTMNCCENCGSYCYSSSGPCQSQKVFSSTSVTAYKQNSAQIPPYALG
KSLRPSAEMIETTNDSGKTELFCSINCLSAYRVKTVTSSGVQVSCHSCKTSAIPQYHL
AMSNGTIYSFCSSSCVVAFQNVFSKPKGTNSSAVPLSQGQVVVSPPSSRSAVSIGGGN
TSAVSPSSIRGSAAASLQPLAEQSQQVALTHTVVKLKCQHCNHLFATKPELLFYKGKM
FLFCGKNCSDEYKKKNKVVAMCDYCKLQKIIKETVRFSGVDKPFCSEVCKFLSARDFG
ERWGNYCKMCSYCSQTSPNLVENRLEGKLEEFCCEDCMSKFTVLFYQMAKCDGCKRQG
KLSESIKWRGNIKHFCNLFCVLEFCHQQIMNDCLPQNKVNISKAKTAVTELPSARTDT
TPVITSVMSLAKIPATLSTGNTNSVLKGAVTKEAAKIIQDESTQEDAMKFPSSQSSQP
SRLLKNKGISCKPVTQTKATSCKPHTQHKECQTDLPMPNEKNDAELDSPPSKKKRLGF
FQTYDTEYLKVGFIICPGSKESSPRPQCVICGEILSSENMKPANLSHHLKTKHSELEN
KPVDFFEQKSLEMECQNSSLKKCLLVEKSLVKASYLIAFQTAASKKPFSIAEELIKPY
LVEMCSEVLGSSAGDKMKTIPLSNVTIQHRIDELSADIEDQLIQKVRESKWFALQIDE
SSEISNITLLLCYIRFIDYDCRDVKEELLFCIEMPTQITGFEIFELINKYIDSKSLKK
KKK"
BASE COUNT 1003 a 627 c 618 g 888 t
ORIGIN
1 agcggaggcg tggttggccg gtcgttgcgt tgggatggat caggcggaat tccagaagag
61 aaaataatcc ctgtctagat gcagaggact tggttcctat tccagtgctc ctccggtagc
121 agggaggcga cagaaggtgt ccaactatcc attaccaaga agaaatctat tcgtttgagc
181 ctgagacact ctttgaggta aaaaattaga atgaaagaac ctttggatgg tgaatgtggc
241 aaagcagtgg taccacagca ggagcttctg gacaaaatta aagaagaacc agacaatgct
301 caagagtatg gatgtgtcca acagccaaaa actcaagaaa gtaaattgaa aattggtggt
361 gtgtcttcag ttaatgagag acctattgcc cagcagttga acccaggctt tcagctttct
421 tttgcatcat ctggcccaag tgtgttgctt ccttcagttc cagctgttgc tattaaggtt
481 ttttgttctg gttgtaaaaa aatgctttat aagggccaaa ctgcatatca taagacagga
541 tctactcagc tcttctgctc cacacgatgc atcaccagac attcttcacc tgcctgcctg
601 ccacctcctc ccaagaaaac ctgcacaaac tgctcaaaag acattttaaa tcctaaggat
661 gtgatcacaa ctcgctttga gaattcctat cctagcaaag atttctgcag ccaatcatgc
721 ttgtcatctt atgagctaaa gaaaaaacct gttgttacca tatataccaa aagcatttca
781 actaagtgca gtatgtgtca gaagaatgct gatactcgat ttgaagttaa atataaaaat
841 gtggtacatg gtctttgtag tgatgcctgt ttttcaaaat ttcactctac aaacaacctc
901 accatgaact gttgtgagaa ctgtgggagc tattgctata gtagctctgg tccttgccaa
961 tcccagaagg tttttagttc aacaagtgtc acggcataca agcagaattc tgcccaaatt
1021 cctccatatg ccctggggaa gtcattgagg ccctcagctg aaatgattga gactacaaat
1081 gattcaggaa aaacagagct tttctgctct attaattgct tatctgctta cagagttaag
1141 actgttactt cttcaggtgt ccaggtttca tgtcatagtt gtaaaacctc agcaatccct
1201 cagtatcacc tagccatgtc aaatggaact atatacagct tctgcagctc cagttgtgtg
1261 gttgctttcc agaatgtatt tagcaagcca aaaggaacaa actcttcggc ggtgcccctg
1321 tctcagggcc aagtggttgt aagcccaccc tcctccaggt cagcagtgtc aataggagga
1381 ggtaacacct ctgccgtttc ccccagctcc atccgtggct ctgctgcagc cagcctccaa
1441 cctcttgctg aacaatccca gcaagttgct ttaacccata cagttgttaa actcaagtgt
1501 cagcactgta accatctatt tgccacaaaa ccagaacttc ttttttacaa gggtaaaatg
1561 tttctgtttt gtggcaagaa ttgctctgat gaatacaaga agaaaaataa agttgtggca
1621 atgtgtgact actgtaaact gcagaaaatt ataaaggaga ctgtgcgatt ctcaggggtt
1681 gataagccat tctgtagtga agtttgcaaa ttcctctctg cccgtgactt tggagaacga
1741 tggggaaact actgtaagat gtgcagctac tgttcacaga catccccaaa tttggtagaa
1801 aatcgattgg agggcaagtt agaagagttt tgttgtgaag attgtatgtc caaatttaca
1861 gttctgtttt atcagatggc caagtgtgat ggttgtaaac gacagggtaa actaagcgag
1921 tccataaagt ggcgaggcaa cattaaacat ttctgtaacc tattttgtgt cttggagttt
1981 tgtcatcagc aaattatgaa tgactgtctt ccacaaaata aagtaaatat ttctaaagca
2041 aaaactgctg tgacggagct cccttctgca aggacagata caacaccagt tataaccagt
2101 gtgatgtcat tggcaaaaat acctgctacc ttatctacag ggaacactaa cagtgtttta
2161 aaaggtgcag ttactaaaga ggcagcaaag atcattcaag atgaaagtac acaggaagat
2221 gctatgaaat ttccatcttc ccaatcttcc cagccttcca ggcttttaaa gaacaaaggc
2281 atatcatgca aacccgtcac acagaccaag gccacttctt gcaaaccaca tacacagcac
2341 aaagaatgtc agacagattt acctatgcct aatgaaaaaa atgatgcaga acttgattct
2401 ccaccttcaa agaaaaaaag attaggtttt ttccagactt atgatacaga atatttaaaa
2461 gttggtttta ttatctgtcc tggatcaaaa gaaagttcac caaggccaca gtgtgtcatt
2521 tgtggagaga tcttatccag tgaaaacatg aagccagcaa atctttctca tcatttgaag
2581 acaaaacatt cagaattaga aaacaaacca gtagattttt ttgaacaaaa atctttagaa
2641 atggaatgtc aaaatagttc tttaaaaaag tgtttactag ttgaaaagtc acttgtgaaa
2701 gcttcttatt taattgcttt ccaaactgct gcaagcaaga agccattctc cattgctgaa
2761 gaattaatta aaccatattt agtagaaatg tgttcagaag ttttgggttc aagtgctgga
2821 gacaaaatga aaactattcc actttctaat gttacaattc aacacaggat tgatgaacta
2881 tctgcagaca ttgaagacca gctgattcaa aaggtcagag agtcaaagtg gtttgccctt
2941 cagatagatg agtcatcaga aatctcaaat atcacacttc ttttgtgcta tattcgtttc
3001 attgattatg attgtcgtga tgtaaaagaa gaattattat tttgcattga aatgcctact
3061 caaataactg gctttgaaat atttgaacta ataaataaat atattgatag taaatctctg
3121 aaaaaaaaaa aaaaaa
//