LOCUS BC033893 2865 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens protein phosphatase 1D magnesium-dependent, delta
isoform, mRNA (cDNA clone MGC:33257 IMAGE:5265521), complete cds.
ACCESSION BC033893
VERSION BC033893.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2865)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2865)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC033893.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: j Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29558519.
FEATURES Location/Qualifiers
source 1..2865
/db_xref="H-InvDB:HIT000042020"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33257 IMAGE:5265521"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2865
/gene="PPM1D"
/gene_synonym="PP2C-DELTA"
/gene_synonym="WIP1"
/db_xref="GeneID:8493"
/db_xref="HGNC:HGNC:9277"
/db_xref="MIM:605100"
CDS 107..1924
/gene="PPM1D"
/gene_synonym="PP2C-DELTA"
/gene_synonym="WIP1"
/codon_start=1
/product="protein phosphatase 1D magnesium-dependent,
delta isoform"
/protein_id="AAH33893.1"
/db_xref="GeneID:8493"
/db_xref="HGNC:HGNC:9277"
/db_xref="MIM:605100"
/translation="MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPTAEEKPSPRRS
LSQPLPPRPSPAALPGGEVSGKGPAVAAREARDPLPDAGASPAPSRCCRRRSSVAFFA
VCDGHGGREAAQFAREHFWGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLAEW
PKTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHK
PELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALG
DLWSYDFFSGEFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAISMCQDQEE
KKYLMGEHGQSCAKMLVNRALGRWRQRMLRADNTSAIVICISPEVDNQGNFTNEDELY
LNLTDSPSYNSQETCVMTPSPCSTPPVKSLEEDPWPRVNSKDHIPALVRSNAFSENFL
EVSAEIARENVQGVVIPSKDPEPLEENCAKALTLRIHDSLNNSLPIGLVPTNSTNTVM
DQKNLKMSTPGQMKAQEIERTPPTNFKRTLEESNSGPLMKKHRRNGLSRSSGAQPASL
PTTSQRKNSVKLTMRRRLRGQKKIGNPLLHQHRKTVCVC"
BASE COUNT 807 a 616 c 670 g 772 t
ORIGIN
1 ggcgtcgtcg aagataaaca atagttggcc ggcgagcgcc tagtgtgtct cccgccgccg
61 gattcggcgg gctgcgtggg accggcggga tcccggccag ccggccatgg cggggctgta
121 ctcgctggga gtgagcgtct tctccgacca gggcgggagg aagtacatgg aggacgttac
181 tcaaatcgtt gtggagcccg aaccgacggc tgaagaaaag ccctcgccgc ggcggtcgct
241 gtctcagccg ttgcctccgc ggccgtcgcc ggccgccctt cccggcggcg aagtctcggg
301 gaaaggccca gcggtggcag cccgagaggc tcgcgaccct ctcccggacg ccggggcctc
361 gccggcacct agccgctgct gccgccgccg ttcctccgtg gcctttttcg ccgtgtgcga
421 cgggcacggc gggcgggagg cggcacagtt tgcccgggag cacttttggg gtttcatcaa
481 gaagcagaag ggtttcacct cgtccgagcc ggctaaggtt tgcgctgcca tccgcaaagg
541 ctttctcgct tgtcaccttg ccatgtggaa gaaactggcg gaatggccaa agactatgac
601 gggtcttcct agcacatcag ggacaactgc cagtgtggtc atcattcggg gcatgaagat
661 gtatgtagct cacgtaggtg actcaggggt ggttcttgga attcaggatg acccgaagga
721 tgactttgtc agagctgtgg aggtgacaca ggaccataag ccagaacttc ccaaggaaag
781 agaacgaatc gaaggacttg gtgggagtgt aatgaacaag tctggggtga atcgtgtagt
841 ttggaaacga cctcgactca ctcacaatgg acctgttaga aggagcacag ttattgacca
901 gattcctttt ctggcagtag caagagcact tggtgatttg tggagctatg atttcttcag
961 tggtgaattt gtggtgtcac ctgaaccaga cacaagtgtc cacactcttg accctcagaa
1021 gcacaagtat attatattgg ggagtgatgg actttggaat atgattccac cacaagatgc
1081 catctcaatg tgccaggacc aagaggagaa aaaatacctg atgggtgagc atggacaatc
1141 ttgtgccaaa atgcttgtga atcgagcatt gggccgctgg aggcagcgta tgctccgagc
1201 agataacact agtgccatag taatctgcat ctctccagaa gtggacaatc agggaaactt
1261 taccaatgaa gatgagttat acctgaacct gactgacagc ccttcctata atagtcaaga
1321 aacctgtgtg atgactcctt ccccatgttc tacaccacca gtcaagtcac tggaggagga
1381 tccatggcca agggtgaatt ctaaggacca tatacctgcc ctggttcgta gcaatgcctt
1441 ctcagagaat tttttagagg tttcagctga gatagctcga gagaatgtcc aaggtgtagt
1501 cataccctca aaagatccag aaccacttga agaaaattgc gctaaagccc tgactttaag
1561 gatacatgat tctttgaata atagccttcc aattggcctt gtgcctacta attcaacaaa
1621 cactgtcatg gaccaaaaaa atttgaagat gtcaactcct ggccaaatga aagcccaaga
1681 aattgaaaga acccctccaa caaactttaa aaggacatta gaagagtcca attctggccc
1741 cctgatgaag aagcatagac gaaatggctt aagtcgaagt agtggtgctc agcctgcaag
1801 tctccccaca acctcacagc gaaagaactc tgttaaactc accatgcgac gcagacttag
1861 gggccagaag aaaattggaa atcctttact tcatcaacac aggaaaactg tttgtgtttg
1921 ctgaaatgca tctgggaaat gaggtttttc caaacttagg atataagagg gctttttaaa
1981 tttggtgccg atgttgaact ttttttaagg ggagaaaatt aaaagaaata tacagtttga
2041 ctttttggaa ttcagcagtt ttatcctggc cttgtacttg cttgtattgt aaatgtggat
2101 tttgtagatg ttagggtata agttgctgta aaatttgtgt aaatttgtat ccacacaaat
2161 tcagtctctg aatacacagt attcagagtc tctgatacac agtaattgtg acaatagggc
2221 taaatgttta aagaaatcaa aagaatctat tagattttag aaaaacattt aaacttttta
2281 aaatacttat taaaaaattt gtataagcca cttgtcttga aaactgtgca actttttaaa
2341 gtaaattatt aagcagactg gaaaagtgat gtattttcat agtgacctgt gtttcactta
2401 atgtttctta gagccaagtg tcttttaaac attatttttt atttctgatt tcataattca
2461 gaactaaatt tttcatagaa gtgttgagcc atgctacagt tagtcttgtc ccaattaaaa
2521 tactatgcag tatctcttac atcagtagca tttttctaaa accttagtca tcagatatgc
2581 ttactaaatc ttcagcatag aaggaagtgt gtttgcctaa aacaatctaa aacaattccc
2641 ttctttttca tcccagacca atggcattat taggtcttaa agtagttact cccttctcgt
2701 gtttgcttaa aatatgtgaa gttttccttg ctatttcaat aacagatggt gctgctaatt
2761 cccaacattt cttaaattat tttatatcat acagttttca ttgattatat gggtatatat
2821 tcatctaata aatcagtgaa ctgttcctca aaaaaaaaaa aaaaa
//